| Calling Sequence | AddSpecies(t,Species)
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| Parameters |
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| Synopsis | Species: List of species, this is used to distinguish between paralogous and orthologous changes. Every node of the tree contains the information of which species were on the left (t[6]) and on the right (t[7]) side of the branch. If the tree length is less than 6, then the tree is expanded with 0 at position 4 and 5. (e.g. {MOUSE, YEAST, ECOLI}). | ||||||||||||