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EstimatePB93

Function EstimatePB93


Calling Sequence  EstimatePB93(seq1,seq2)
Parameters
NameTypeDescription

seq1 stringaligned DNA sequence
seq2 stringaligned DNA sequence
Return Type  array(numeric)
Synopsis Computes Ka and Ks following the method by Pamilo and Bianchi (1993). The function returns a list [Ka,Ks] with the two estimates. If these values cannot be computed (typically because of too much divergence), then [-1,-1] is returned.
Examples
> EstimatePB93(AAAAAATTT,AAAAAGTTA);
[0.1648, 0.7611]
See also CodonAlign,   EstimateNG86,   EstimateSynPAM