Eukaryota All Eukaryotal genomes, Thu Dec 22 16:38:15 2011, 124 species, 258439 orthologs, 77 top groups, 1316 used here, Arithmetic, BestSubset, DimlessQual: best: 0.045328, ave: 0.06715 +- 0.00015, var: 5.889e-06, Z=-8.993 2011-12-31T03:30:24+01:00 97.000000 82.000000 GIALA 184922 GIALA Giardia lamblia Giardia intestinalis 100.000000 100.000000 LEIBR 5660 LEIBR Leishmania braziliensis 100.000000 LEIIN 5671 LEIIN Leishmania infantum LEIMA 5664 LEIMA Leishmania major TRYBB 5702 TRYBB Trypanosoma brucei 49.000000 80.000000 100.000000 100.000000 PUCGT 418459 PUCGT Puccinia graminis f. sp. tritici Black rust 100.000000 USTMA 237631 USTMA Ustilago maydis 96.000000 CRYNE 5207 CRYNE Cryptococcus neoformans Filobasidiella neoformans 100.000000 AGABI 192523 AGABI Agaricus bisporus Common mushroom LACBI 29883 LACBI Laccaria bicolor 100.000000 82.000000 100.000000 YARLI 284591 YARLI Yarrowia lipolytica Candida lipolytica 100.000000 100.000000 100.000000 PICST 322104 PICST Pichia stipitis DEBHA 4959 DEBHA Debaryomyces hansenii Torulaspora hansenii 100.000000 LODEL 379508 LODEL Lodderomyces elongisporus CANAL 5476 CANAL Candida albicans 100.000000 100.000000 CANGA 5478 CANGA Candida glabrata Yeast Torulopsis glabrata YEAST 4932 YEAST Saccharomyces cerevisiae Baker's yeast 100.000000 KLULA 284590 KLULA Kluyveromyces lactis Yeast ASHGO 284811 ASHGO Ashbya gossypii Yeast Eremothecium gossypii 100.000000 81.000000 100.000000 ASPFU 330879 ASPFU Aspergillus fumigatus Sartorya fumigata EMENI 162425 EMENI Emericella nidulans Aspergillus nidulans 100.000000 PHANO 321614 PHANO Phaeosphaeria nodorum Stagonospora nodorum MYCGR 54734 MYCGR Mycosphaerella graminicola Septoria tritici 100.000000 BOTFB 332648 BOTFB Botrytis cinerea Botryotinia fuckeliana 100.000000 MAGGR 148305 MAGGR Magnaporthe grisea rice blast fungus NEUCR 5141 NEUCR Neurospora crassa SCHPO 4896 SCHPO Schizosaccharomyces pombe Fission yeast 79.000000 ENCCU 6035 ENCCU Encephalitozoon cuniculi GUITH 55529 GUITH Guillardia theta (nucleomorph only) Cryptomonas phi 100.000000 MONBE 81824 MONBE Monosiga brevicollis 100.000000 100.000000 SCHMA 6183 SCHMA Schistosoma mansoni 100.000000 100.000000 100.000000 DAPPU 6669 DAPPU Daphnia pulex Water flea 100.000000 ACYPI 7029 ACYPI Acyrthosiphon pisum Pea aphid 100.000000 100.000000 BOMMO 7091 BOMMO Bombyx mori Silkworm 100.000000 100.000000 100.000000 AEDAE 7159 AEDAE Aedes aegypti Yellow fever mosquito CULQU 7176 CULQU Culex quinquefasciatus Southern house mosquito Culex pungens ANOGA 7165 ANOGA Anopheles gambiae African malaria mosquito 100.000000 100.000000 DROVI 7244 DROVI Drosophila virilis Fruit fly DROGR 7222 DROGR Drosophila grimshawi Fruit fly Idiomyia grimshawi 100.000000 DROWI 7260 DROWI Drosophila willistoni 100.000000 DROPS 46245 DROPS Drosophila pseudoobscura Fruit Fly DROME 7227 DROME Drosophila melanogaster Fruitfly 96.000000 PEDHC 121224 PEDHC Pediculus humanus corporis Body louse APIME 7460 APIME Apis mellifera Honeybee IXOSC 6945 IXOSC Ixodes scapularis Tick 100.000000 TRIAD 10228 TRIAD Trichoplax adhaerens 87.000000 97.000000 NEMVE 45351 NEMVE Nematostella vectensis Sea anemone 100.000000 88.000000 STRPU 7668 STRPU Strongylocentrotus purpuratus Purple sea urchin 100.000000 BRAFL 7739 BRAFL Branchiostoma floridae Lancelet 100.000000 100.000000 DANRE 7955 DANRE Danio rerio Zebrafish Brachydanio rerio 100.000000 100.000000 GASAC 69293 GASAC Gasterosteus aculeatus Three spined stickleback 100.000000 TAKRU 31033 TAKRU Takifugu rubripes Fugu Fugu rubripes TETNG 99883 TETNG Tetraodon nigroviridis Green puffer ORYLA 8090 ORYLA Oryzias latipes Medaka fish Japanese ricefish 100.000000 XENTR 8364 XENTR Xenopus tropicalis Western clawed frog Silurana tropicalis 100.000000 100.000000 100.000000 100.000000 100.000000 RATNO 10116 RATNO Rattus norvegicus Rat MOUSE 10090 MOUSE Mus musculus Mouse 89.000000 DIPOR 10020 DIPOR Dipodomys ordii Kangaroo rat 63.000000 CAVPO 10141 CAVPO Cavia porcellus Guinea pig 99.000000 95.000000 78.000000 100.000000 CHOHO 9358 CHOHO Choloepus hoffmanni Sloth DASNO 9361 DASNO Dasypus novemcinctus Armadillo 100.000000 ECHTE 9371 ECHTE Echinops telfairi Tenrec 100.000000 PROCA 9813 PROCA Procavia capensis Hyrax LOXAF 9785 LOXAF Loxodonta africana African elephant 78.000000 94.000000 TUPGB 0 TUPGB Tupaia belangeri Tree shrew 82.000000 SPETR 43179 SPETR Spermophilus tridecemlineatus Squirrel 100.000000 100.000000 MICMU 30608 MICMU Microcebus murinus Mouse lemur OTOGA 30611 OTOGA Otolemur garnettii Bushbaby 86.000000 TARSY 9478 TARSY Tarsius syrichta Tarsier 100.000000 CALJA 9483 CALJA Callithrix jacchus Marmoset 100.000000 MACMU 9544 MACMU Macaca mulatta Rhesus macaque 100.000000 99.000000 PONAB 9601 PONAB Pongo pygmaeus abelii Orangutan 100.000000 80.000000 GORGO 9593 GORGO Gorilla gorilla Gorilla HUMAN 9606 HUMAN Homo sapiens Human PANTR 9598 PANTR Pan troglodytes Chimpanzee NOMLE 61853 NOMLE Nomascus leucogenys Northern white-cheeked gibbon Hylobates leucogenys 96.000000 86.000000 ERIEU 9365 ERIEU Erinaceus europaeus Hedgehog SORAR 42254 SORAR Sorex araneus Common shrew 100.000000 100.000000 PTEVA 132908 PTEVA Pteropus vampyrus Megabat MYOLU 59463 MYOLU Myotis lucifugus Microbat 100.000000 100.000000 HORSE 9796 HORSE Equus caballus Horse 100.000000 FELCA 9685 FELCA Felis catus Cat 100.000000 AILME 9646 AILME Ailuropoda melanoleuca Giant panda CANFA 9615 CANFA Canis familiaris Dog 100.000000 98.000000 PIGXX 9823 PIGXX Sus scrofa Pig 100.000000 TURTR 9739 TURTR Tursiops truncatus Dolphin BOVIN 9913 BOVIN Bos taurus Cow LAMPA 30538 LAMPA Lama guanicoe pacos Alpaca Vicugna pacos; Lama pacos 100.000000 OCHPR 9978 OCHPR Ochotona princeps Pika RABIT 9986 RABIT Oryctolagus cuniculus Rabbit 100.000000 MONDO 13616 MONDO Monodelphis domestica Opossum 100.000000 SARHA 9305 SARHA Sarcophilus harrisii Tasmanian devil Sarcophilus laniarius MACEU 9315 MACEU Macropus eugenii Wallaby ORNAN 9258 ORNAN Ornithorhynchus anatinus Platypus 100.000000 ANOCA 28377 ANOCA Anolis carolinensis Anole lizard American chameleon 100.000000 TAEGU 59729 TAEGU Taeniopygia guttata Zebra finch 100.000000 MELGA 9103 MELGA Meleagris gallopavo Turkey CHICK 9031 CHICK Gallus gallus Chicken 100.000000 CIOSA 51511 CIOSA Ciona savignyi Pacific transparent sea squirt CIOIN 7719 CIOIN Ciona intestinalis Sea Squirt Ascidia intestinalis 100.000000 100.000000 CAPI1 73382 CAPI1 Capitella sp. I HELRO 6412 HELRO Helobdella robusta LOTGI 225164 LOTGI Lottia gigantea Limpet 100.000000 PRIPA 54126 PRIPA Pristionchus pacificus Nematode 100.000000 CAEJA 281687 CAEJA Caenorhabditis japonica Nematode 100.000000 93.000000 97.000000 CAERE 31234 CAERE Caenorhabditis remanei CAEBR 6238 CAEBR Caenorhabditis briggsae CAEBE 135651 CAEBE Caenorhabditis brenneri CAEEL 6239 CAEEL Caenorhabditis elegans Nematode 97.000000 DICDI 44689 DICDI Dictyostelium discoideum Slime mold 90.000000 100.000000 EMIHU 280463 EMIHU Emiliania huxleyi CCMP1516 100.000000 100.000000 100.000000 100.000000 MAIZE 4577 MAIZE Zea mays Maize SORBI 4558 SORBI Sorghum bicolor Sorghum ORYSJ 39947 ORYSJ Oryza sativa Japonica Group Rice 100.000000 100.000000 VITVI 29760 VITVI Vitis vinifera Grape 100.000000 POPTR 3694 POPTR Populus trichocarpa Western balsam poplar MANES 3983 MANES Manihot esculenta Cassava Manioc 100.000000 ARALY 59689 ARALY Arabidopsis lyrata Lyre-leaved rock-cress ARATH 3702 ARATH Arabidopsis thaliana Thale cress / Mouse-ear cress 97.000000 CHLRE 3055 CHLRE Chlamydomonas reinhardtii 100.000000 OSTLU 436017 OSTLU Ostreococcus lucimarinus OSTTA 70448 OSTTA Ostreococcus tauri 100.000000 PLAF7 36329 PLAF7 Plasmodium falciparum Malaria parasite CRYPV 5807 CRYPV Cryptosporidium parvum