All Bacterial genomes All Bacterial genomes, Wed Jun 27 01:46:01 2007, 340 species, 114863 orthologs, 943 used here, Arithmetic, BestDimless, DimlessQual: best: 4.3995, ave: 4.997 +- 0.011, var: 0.03114, Z=-3.386 2010-01-05T16:50:05+01:00 63.000000 100.000000 100.000000 100.000000 83.000000 UREPA 134821 UREPA Ureaplasma parvum Ureaplasma urealyticum biotype 1 MYCPE 28227 MYCPE Mycoplasma penetrans 100.000000 MYCGA 2096 MYCGA Mycoplasma gallisepticum 100.000000 MYCPN 272634 MYCPN Mycoplasma pneumoniae MYCGE 2097 MYCGE Mycoplasma genitalium 100.000000 94.000000 MYCS5 262723 MYCS5 Mycoplasma synoviae (strain 53) 67.000000 MYCMO 2118 MYCMO Mycoplasma mobile MYCPU 2107 MYCPU Mycoplasma pulmonis 100.000000 MYCH7 262722 MYCH7 Mycoplasma hyopneumoniae (strain 7448) 97.000000 MYCHJ 262719 MYCHJ Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) MYCH2 295358 MYCH2 Mycoplasma hyopneumoniae (strain 232) 100.000000 MESFL 2151 MESFL Mesoplasma florum Acholeplasma florum 100.000000 MYCMS 44101 MYCMS Mycoplasma mycoides subsp. mycoides SC MYCCT 340047 MYCCT Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) ONYPE 100379 ONYPE Onion yellows phytoplasma 63.000000 52.000000 63.000000 FUSNN 190304 FUSNN Fusobacterium nucleatum subsp. nucleatum 100.000000 THETN 119072 THETN Thermoanaerobacter tengcongensis 100.000000 90.000000 CLOTE 1513 CLOTE Clostridium tetani 77.000000 CLOAB 1488 CLOAB Clostridium acetobutylicum CLONN 386415 CLONN Clostridium novyi (strain NT) 100.000000 CLOPS 289380 CLOPS Clostridium perfringens (strain SM101) 100.000000 CLOP1 195103 CLOP1 Clostridium perfringens (strain ATCC 13124 / NCTC 8237) CLOPE 195102 CLOPE Clostridium perfringens 76.000000 DESHY 138119 DESHY Desulfitobacterium hafniense (strain Y51) 51.000000 86.000000 SYMTH 2734 SYMTH Symbiobacterium thermophilum 99.000000 100.000000 DEHSC 255470 DEHSC Dehalococcoides sp. (strain CBDB1) DEHE1 243164 DEHE1 Dehalococcoides ethenogenes (strain 195) 97.000000 34.000000 67.000000 100.000000 100.000000 TREDE 158 TREDE Treponema denticola TREPA 160 TREPA Treponema pallidum 100.000000 100.000000 BORAP 390236 BORAP Borrelia afzelii (strain PKo) BORGA 29519 BORGA Borrelia garinii BORBU 139 BORBU Borrelia burgdorferi Lyme disease spirochete 100.000000 100.000000 LEPBJ 355277 LEPBJ Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) LEPBL 355276 LEPBL Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) 100.000000 LEPIC 44275 LEPIC Leptospira interrogans (serogroup Icterohaemorrhagiae / serovar Copenhageni) LEPIN 189518 LEPIN Leptospira interrogans 50.000000 69.000000 53.000000 56.000000 RHOBA 265606 RHOBA Rhodopirellula baltica 94.000000 100.000000 RUBXD 266117 RUBXD Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) 100.000000 68.000000 100.000000 PROAC 1747 PROAC Propionibacterium acnes 100.000000 LEIXX 59736 LEIXX Leifsonia xyli (subsp. xyli) 98.000000 100.000000 100.000000 NOCFA 37329 NOCFA Nocardia farcinica 100.000000 MYCSS 164756 MYCSS Mycobacterium sp. (strain MCS) 100.000000 87.000000 100.000000 MYCBO 1765 MYCBO Mycobacterium bovis MYCTU 1773 MYCTU Mycobacterium tuberculosis MYCLE 1769 MYCLE Mycobacterium leprae 100.000000 MYCA1 243243 MYCA1 Mycobacterium avium (strain 104) MYCPA 1770 MYCPA Mycobacterium paratuberculosis 100.000000 CORJK 306537 CORJK Corynebacterium jeikeium (strain K411) 100.000000 CORDI 1717 CORDI Corynebacterium diphtheriae 100.000000 COREF 152794 COREF Corynebacterium efficiens CORGL 1718 CORGL Corynebacterium glutamicum 100.000000 FRASC 106370 FRASC Frankia sp. (strain CcI3) 100.000000 NOCSJ 196162 NOCSJ Nocardioides sp. (strain BAA-499 / JS614) 70.000000 THEFY 269800 THEFY Thermobifida fusca (strain YX) 100.000000 STRCO 1902 STRCO Streptomyces coelicolor STRAW 227882 STRAW Phytoplasma sp. (strain STRAWB1) 100.000000 TROW8 218496 TROW8 Tropheryma whipplei (strain TW08/27) Whipple's bacillus TROWT 203267 TROWT Tropheryma whipplei (strain Twist) Whipple's bacillus 100.000000 BIFAA 367928 BIFAA Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) BIFLO 206672 BIFLO Bifidobacterium longum 100.000000 100.000000 THET8 300852 THET8 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) THET2 262724 THET2 Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) 100.000000 DEIGD 319795 DEIGD Deinococcus geothermalis (strain DSM 11300) DEIRA 243230 DEIRA Deinococcus radiodurans 100.000000 GUITH 55529 GUITH Guillardia theta (nucleomorph only) Cryptomonas phi 95.000000 100.000000 100.000000 PROM9 74546 PROM9 Prochlorococcus marinus (strain MIT 9312) 100.000000 PROM5 167542 PROM5 Prochlorococcus marinus (strain MIT 9515) PROMP 59919 PROMP Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) 100.000000 87.000000 PROMT 59920 PROMT Prochlorococcus marinus (strain NATL2A) PROMA 1219 PROMA Prochlorococcus marinus 100.000000 100.000000 PROMM 74547 PROMM Prochlorococcus marinus (strain MIT 9313) PROM3 59922 PROM3 Prochlorococcus marinus (strain MIT 9303) 87.000000 SYNS3 64471 SYNS3 Synechococcus sp. (strain CC9311) 100.000000 SYNS9 316279 SYNS9 Synechococcus sp. (strain CC9902) 100.000000 SYNSC 110662 SYNSC Synechococcus sp. (strain CC9605) SYNPX 84588 SYNPX Synechococcus sp. (strain WH8102) 72.000000 GLOVI 33072 GLOVI Gloeobacter violaceus 100.000000 100.000000 SYNJB 321332 SYNJB Synechococcus sp. (strain JA-2-3B'a(2-13)) SYNJA 321327 SYNJA Synechococcus sp. (strain JA-3-3Ab) 100.000000 52.000000 SYNEL 92.000000 SYNY3 1148 SYNY3 Synechocystis sp. (strain PCC 6803) 100.000000 ANAVT 240292 ANAVT Anabaena variabilis (strain ATCC 29413 / PCC 7937) ANASP 103690 ANASP Anabaena sp. (strain PCC 7120) SYNP6 269084 SYNP6 Synechococcus sp. (strain PCC 6301) Anacystis nidulans 32.000000 42.000000 100.000000 PARUW 264201 PARUW Parachlamydia sp. (strain UWE25) (subsp. Acanthamoeba sp.) 100.000000 100.000000 CHLTR 813 CHLTR Chlamydia trachomatis CHLMU 83560 CHLMU Chlamydia muridarum 100.000000 100.000000 CHLAB 83555 CHLAB Chlamydophila abortus 77.000000 CHLFF 264202 CHLFF Chlamydophila felis (strain Fe/C-56) CHLCV 83557 CHLCV Chlamydophila caviae CHLPN 83558 CHLPN Chlamydia pneumoniae 90.000000 BDEBA 959 BDEBA Bdellovibrio bacteriovorus 79.000000 82.000000 100.000000 100.000000 100.000000 HELPJ 85963 HELPJ Helicobacter pylori J99 Campylobacter pylori J99 100.000000 HELPH 357544 HELPH Helicobacter pylori (strain HPAG1) HELPY 210 HELPY Helicobacter pylori Campylobacter pylori 77.000000 HELHP 32025 HELHP Helicobacter hepaticus WOLSU 844 WOLSU Wolinella succinogenes 99.000000 SULDN 326298 SULDN Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) 100.000000 CAMFF 360106 CAMFF Campylobacter fetus subsp. fetus (strain 82-40) 100.000000 CAMJR 195099 CAMJR Campylobacter jejuni (strain RM1221) CAMJE 192222 CAMJE Campylobacter jejuni 100.000000 72.000000 MAGSM 156889 MAGSM Magnetococcus sp. (strain MC-1) 100.000000 96.000000 PELUB 198252 PELUB Pelagibacter ubique 100.000000 100.000000 RICBR 336407 RICBR Rickettsia bellii (strain RML369-C) 100.000000 100.000000 RICPR 782 RICPR Rickettsia prowazekii RICTY 785 RICTY Rickettsia typhi 100.000000 RICFE 42862 RICFE Rickettsia felis Rickettsia azadi RICCN 272944 RICCN Rickettsia conorii 100.000000 NEOSM 222891 NEOSM Neorickettsia sennetsu (strain Miyayama) 100.000000 100.000000 100.000000 ANAPZ 212042 ANAPZ Anaplasma phagocytophilum (strain HZ) ANAMM 234826 ANAMM Anaplasma marginale (strain St. Maries) 100.000000 100.000000 EHRCJ 269484 EHRCJ Ehrlichia canis (strain Jake) EHRCR 205920 EHRCR Ehrlichia chaffeensis (strain Arkansas) 100.000000 EHRRG 302409 EHRRG Ehrlichia ruminantium (strain Gardel) EHRRW 254945 EHRRW Ehrlichia ruminantium (strain Welgevonden) 100.000000 WOLTR 292805 WOLTR Wolbachia sp. (subsp. Brugia malayi) (strain TRS) WOLPM 163164 WOLPM Wolbachia pipientis wMel 100.000000 100.000000 GLUOX 442 GLUOX Gluconobacter oxydans Gluconobacter suboxydans GRABC 391165 GRABC Granulobacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) 82.000000 88.000000 100.000000 RHORT 269796 RHORT Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) MAGMM 342108 MAGMM Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) 100.000000 100.000000 39.000000 MARMM 394221 MARMM Maricaulis maris (strain MCS10) CAUCR 190650 CAUCR Caulobacter crescentus HYPNA 228405 HYPNA Hyphomonas neptunium (strain ATCC 15444) 99.000000 100.000000 PARDP 318586 PARDP Paracoccus denitrificans (strain Pd 1222) 90.000000 100.000000 JANSC 290400 JANSC Jannaschia sp. (strain CCS1) 100.000000 ROSDO 375451 ROSDO Roseobacter denitrificans (strain ATCC 33942 / OCh 114) 100.000000 SILST 292414 SILST Silicibacter sp. (strain TM1040) SILPO 89184 SILPO Silicibacter pomeroyi RHOS4 272943 RHOS4 Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) 100.000000 100.000000 100.000000 BARQU 803 BARQU Bartonella quintana Rochalimaea quintana BARHE 38323 BARHE Bartonella henselae Rochalimaea henselae 100.000000 100.000000 RHILO 381 RHILO Rhizobium loti Mesorhizobium loti 100.000000 58.000000 95.000000 BRUA2 359391 BRUA2 Brucella abortus (strain 2308) BRUAB 235 BRUAB Brucella abortus BRUME 29459 BRUME Brucella melitensis BRUSU 29461 BRUSU Brucella suis 100.000000 RHIME 382 RHIME Rhizobium meliloti Sinorhizobium meliloti 100.000000 100.000000 RHIEC 347834 RHIEC Rhizobium etli (strain CFN 42 / ATCC 51251) RHIL3 216596 RHIL3 Rhizobium leguminosarum bv. viciae (strain 3841) AGRT5 176299 AGRT5 Agrobacterium tumefaciens (strain C58 / ATCC 33970) 100.000000 77.000000 100.000000 NITWN 323098 NITWN Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) NITHX 323097 NITHX Nitrobacter hamburgensis (strain X14 / DSM 10229) 100.000000 RHOPB 316056 RHOPB Rhodopseudomonas palustris (strain BisB18) 100.000000 100.000000 RHOP2 316058 RHOP2 Rhodopseudomonas palustris (strain HaA2) RHOPS 316057 RHOPS Rhodopseudomonas palustris (strain BisB5) RHOPA 1076 RHOPA Rhodopseudomonas palustris BRAJA 224911 BRAJA Bradyrhizobium japonicum 100.000000 ZYMMO 542 ZYMMO Zymomonas mobilis 100.000000 ERYLH 314225 ERYLH Erythrobacter litoralis (strain HTCC2594) NOVAD 279238 NOVAD Novosphingobium aromaticivorans (strain DSM 12444) 100.000000 100.000000 FRAT1 393115 FRAT1 Mycobacteriophage FRAT1 FRATT 119856 FRATT Francisella tularensis (subsp. tularensis) 100.000000 100.000000 100.000000 NITOC 323261 NITOC Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) METCA 414 METCA Methylococcus capsulatus 59.000000 55.000000 THICR 317025 THICR Thiomicrospira crunogena (strain XCL-2) 71.000000 100.000000 ACIAD 62977 ACIAD Acinetobacter sp. (strain ADP1) 100.000000 PSYCK 335284 PSYCK Psychrobacter cryohalolentis (strain K5) PSYAR 100.000000 100.000000 ALCBS 393595 ALCBS Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) 99.000000 CHRSD 290398 CHRSD Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) 61.000000 SACD2 203122 SACD2 Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) 94.000000 100.000000 100.000000 PSEPK 160488 PSEPK Pseudomonas putida (strain KT2440) 100.000000 100.000000 PSEF5 220664 PSEF5 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) PSEPF 205922 PSEPF Pseudomonas fluorescens (strain PfO-1) 100.000000 100.000000 PSEU2 205918 PSEU2 Pseudomonas syringae pv. syringae (strain B728a) PSE14 264730 PSE14 Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) PSESM 323 PSESM Pseudomonas syringae (pv. tomato) PSEAE 208964 PSEAE Pseudomonas aeruginosa 100.000000 MARAV 351348 MARAV Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) HAHCH 349521 HAHCH Hahella chejuensis (strain KCTC 2396) 100.000000 59.000000 WIGBR 36870 WIGBR Wigglesworthia glossinidia brevipalpis 38.000000 100.000000 100.000000 SHEDO 318161 SHEDO Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) SHEFN 318167 SHEFN Shewanella frigidimarina (strain NCIMB 400) 100.000000 SHESR 60481 SHESR Shewanella sp. (strain MR-7) SHEON 70863 SHEON Shewanella oneidensis 51.000000 48.000000 100.000000 BLOFL 203907 BLOFL Candidatus Blochmannia floridanus BLOPB 291272 BLOPB Blochmannia pennsylvanicus (strain BPEN) 100.000000 BUCBP 135842 BUCBP Buchnera aphidicola (subsp. Baizongia pistaciae) 100.000000 BUCAI 118099 BUCAI Buchnera aphidicola (subsp. Acyrthosiphon pisum) Acyrthosiphon pisum symbiotic bacterium BUCAP 98794 BUCAP Buchnera aphidicola (subsp. Schizaphis graminum) 94.000000 100.000000 PHOPR 74109 PHOPR Photobacterium profundum Photobacterium sp. (strain SS9) 100.000000 VIBF1 312309 VIBF1 Vibrio fischeri (strain ATCC 700601 / ES114) 100.000000 VIBCH 666 VIBCH Vibrio cholerae 100.000000 VIBPA 670 VIBPA Vibrio parahaemolyticus 100.000000 VIBVU 672 VIBVU Vibrio vulnificus VIBVY 196600 VIBVY Vibrio vulnificus (strain YJ016) 97.000000 100.000000 HAEDU 730 HAEDU Haemophilus ducreyi 100.000000 50.000000 MANSM 221988 MANSM Mannheimia succiniciproducens (strain MBEL55E) 100.000000 HAEI8 281310 HAEI8 Haemophilus influenzae (strain 86-028NP) HAEIN 71421 HAEIN Haemophilus influenzae 60.000000 PASMU 272843 PASMU Pasteurella multocida HAES1 205914 HAES1 Haemophilus somnus (strain 129PT) 100.000000 BAUCH 374463 BAUCH Baumannia cicadellinicola (subsp. Homalodisca coagulata) 100.000000 PHOLL 141679 PHOLL Photorhabdus luminescens (subsp. laumondii) 71.000000 SODGM 343509 SODGM Sodalis glossinidius (strain morsitans) 100.000000 100.000000 100.000000 YERPS 273123 YERPS Yersinia pseudotuberculosis 85.000000 YERPA 360102 YERPA Yersinia pestis (biovar Antiqua strain Antiqua) 76.000000 YERPN 377628 YERPN Yersinia pestis (biovar Antiqua strain Nepal516) YERPE 214092 YERPE Yersinia pestis ERWCT 29471 ERWCT Erwinia carotovora (subsp. atroseptica) Pectobacterium atrosepticum 100.000000 100.000000 44.000000 SALTI 220341 SALTI Salmonella typhi 82.000000 SALTY 90371 SALTY Salmonella typhimurium SALCH 28901 SALCH Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 Salmonella enterica SALPA 54388 SALPA Salmonella paratyphi-a 100.000000 SHIFL 623 SHIFL Shigella flexneri 83.000000 49.000000 SHISS 300269 SHISS Shigella sonnei (strain Ss046) 45.000000 35.000000 100.000000 ECOL5 362663 ECOL5 Escherichia coli O6:K15:H31 (strain 536) 83.000000 ECOUT 364106 ECOUT Escherichia coli (strain UTI89 / UPEC) ECOL6 217992 ECOL6 Escherichia coli O6 82.000000 SHIDS 300267 SHIDS Shigella dysenteriae serotype 1 (strain Sd197) ECO57 83334 ECO57 Escherichia coli O157:H7 ECOLI 511145 ECOLI Escherichia coli (strain K12) SHIBS 300268 SHIBS Shigella boydii serotype 4 (strain Sb227) 54.000000 IDILO 135577 IDILO Idiomarina loihiensis 100.000000 PSEA6 342610 PSEA6 Pseudoalteromonas atlantica (strain T6c / BAA-1087) 96.000000 COLP3 167879 COLP3 Colwellia psychrerythraea (strain 34H / ATCC BAA-681) Vibrio psychroerythus PSEHT 326442 PSEHT Pseudoalteromonas haloplanktis (strain TAC 125) 100.000000 100.000000 88.000000 LEGPA 297246 LEGPA Legionella pneumophila (strain Paris) LEGPH 272624 LEGPH Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152) LEGPL 297245 LEGPL Legionella pneumophila (strain Lens) COXBU 777 COXBU Coxiella burnetii 87.000000 100.000000 92.000000 CHRVO 536 CHRVO Chromobacterium violaceum 100.000000 NEIG1 242231 NEIG1 Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) 100.000000 NEIMA 65699 NEIMA Neisseria meningitidis serogroup A NEIMB 122586 NEIMB Neisseria meningitidis serogroup B 98.000000 100.000000 THIDA 292415 THIDA Thiobacillus denitrificans (strain ATCC 25259) 69.000000 100.000000 NITMU 323848 NITMU Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) NITEU 915 NITEU Nitrosomonas europaea METFK 265072 METFK Methylobacillus flagellatus (strain KT / ATTC 51484 / DSM 6875) 100.000000 100.000000 100.000000 93.000000 POLSJ 296591 POLSJ Polaromonas sp. (strain JS666 / ATCC BAA-500) RHOFD 338969 RHOFD Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) 100.000000 VEREI 391735 VEREI Verminephrobacter eiseniae (strain EF01-2) ACIAC 397945 ACIAC Acidovorax avenae subsp. citrulli (strain AAC00-1) 99.000000 100.000000 100.000000 99.000000 BORPA 519 BORPA Bordetella parapertussis BORBR 518 BORBR Bordetella bronchiseptica Alcaligenes bronchisepticus BORPE 520 BORPE Bordetella pertussis BORA1 360910 BORA1 Bordetella avium (strain 197N) 100.000000 100.000000 100.000000 BURCM 339670 BURCM Burkholderia cepacia (strain ATCC 53795 / AMMD) 100.000000 BURS3 269483 BURS3 Burkholderia sp. (strain 383) BURCA 331271 BURCA Burkholderia cenocepacia (strain AU 1054) 100.000000 BURMA 13373 BURMA Burkholderia mallei 76.000000 BURP1 320372 BURP1 Burkholderia pseudomallei (strain 1710b) BURPS 28450 BURPS Burkholderia pseudomallei Pseudomonas pseudomallei 100.000000 RALSO 305 RALSO Ralstonia solanacearum Pseudomonas solanacearum 100.000000 RALEJ 264198 RALEJ Ralstonia eutropha (strain JMP134) Alcaligenes eutrophus RALME 266264 RALME Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) 100.000000 DECAR 159087 DECAR Dechloromonas aromatica (strain RCB) AZOSE 76114 AZOSE Azoarcus sp. (strain EbN1) 100.000000 100.000000 100.000000 100.000000 XANC5 316273 XANC5 Xanthomonas campestris pv. vesicatoria (strain 85-10) XANAC 92829 XANAC Xanthomonas axonopodis (pv. citri) 100.000000 XANOM 342109 XANOM Xanthomonas oryzae pv. oryzae (strain MAFF 311018) XANOR 64187 XANOR Xanthomonas oryzae (pv. oryzae) 100.000000 XANC8 314565 XANC8 Xanthomonas campestris pv. campestris (strain 8004) XANCP 190485 XANCP Xanthomonas campestris pv. campestris 100.000000 XYLFA 2371 XYLFA Xylella fastidiosa XYLFT 183190 XYLFT Xylella fastidiosa (strain Temecula1 / ATCC 700964) 99.000000 100.000000 LAWIP 363253 LAWIP Lawsonia intracellularis (strain PHE/MN1-00) 100.000000 DESDG 207559 DESDG Desulfovibrio desulfuricans (strain G20) DESVH 882 DESVH Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) 95.000000 DESPS 84980 DESPS Desulfotalea psychrophila 98.000000 SYNAS 56780 SYNAS Syntrophus aciditrophicus (strain SB) 100.000000 PELCD 338963 PELCD Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) 100.000000 GEOMG 269799 GEOMG Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GEOSL 243231 GEOSL Geobacter sulfurreducens 100.000000 SOLUE 234267 SOLUE Solibacter usitatus (strain Ellin6076) ACIBL 204669 ACIBL Acidobacteria bacterium (strain Ellin345) 100.000000 87.000000 SALRD 309807 SALRD Salinibacter ruber (strain DSM 13855) 100.000000 100.000000 CHLCH 340177 CHLCH Chlorobium chlorochromatii (strain CaD3) 92.000000 CHLPD 290317 CHLPD Chlorobium phaeobacteroides (strain DSM 266) PELLD 319225 PELLD Pelodictyon luteolum (strain DSM 273) CHLTE 194439 CHLTE Chlorobium tepidum 100.000000 100.000000 PORGI 837 PORGI Porphyromonas gingivalis Bacteroides gingivalis 100.000000 100.000000 BACFN 272559 BACFN Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) BACFR 817 BACFR Bacteroides fragilis BACTN 226186 BACTN Bacteroides thetaiotaomicron 100.000000 GRAFK 411154 GRAFK Gramella forsetii (strain KT0803) CYTH3 269798 CYTH3 Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) 60.000000 THEMA 243274 THEMA Thermotoga maritima AQUAE 224324 AQUAE Aquifex aeolicus 62.000000 SYNWW 335541 SYNWW Syntrophomonas wolfei subsp. wolfei (strain Goettingen) CARHZ 246194 CARHZ Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) 100.000000 100.000000 100.000000 100.000000 OENOB 203123 OENOB Oenococcus oeni (strain BAA-331 / PSU-1) LEUMM 203120 LEUMM Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) 100.000000 100.000000 LACSS 314315 LACSS Lactobacillus sakei subsp. sakei (strain 23K) 99.000000 LACS1 362948 LACS1 Lactobacillus salivarius subsp. salivarius (strain UCC118) 100.000000 LACPL 1590 LACPL Lactobacillus plantarum LACBA 387344 LACBA Lactobacillus brevis (strain ATCC 367 / JCM 1170) 100.000000 LACDA 390333 LACDA Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) 100.000000 LACAC 1579 LACAC Lactobacillus acidophilus 100.000000 LACGA 324831 LACGA Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) LACJO 33959 LACJO Lactobacillus johnsonii 100.000000 ENTFA 226185 ENTFA Enterococcus faecalis 100.000000 100.000000 LACLA 1360 LACLA Lactococcus lactis subsp. lactis LACLS 272622 LACLS Lactococcus lactis subsp. cremoris (strain SK11) 100.000000 100.000000 STRR6 171101 STRR6 Streptococcus pneumoniae (strain ATCC BAA-255 / R6) STRPN 1313 STRPN Streptococcus pneumoniae 100.000000 88.000000 100.000000 STRTD 322159 STRTD Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) 72.000000 STRT2 264199 STRT2 Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) STRT1 299768 STRT1 Streptococcus thermophilus (strain CNRZ 1066) 100.000000 100.000000 50.000000 STRA1 355315 STRA1 Streptococcus agalactiae serotype Ia STRA5 216466 STRA5 Streptococcus agalactiae (serotype V) STRA3 216495 STRA3 Streptococcus agalactiae (serotype III) 100.000000 STRP3 301448 STRP3 Streptococcus pyogenes (serotype M3) 32.000000 30.000000 52.000000 STRPD 370552 STRPD Streptococcus pyogenes serotype M2 (strain MGAS10270) STRP1 301447 STRP1 Streptococcus pyogenes serotype M1 60.000000 STRPM 319700 STRPM Streptococcus pyogenes serotype M28 100.000000 STRPB 370553 STRPB Streptococcus pyogenes serotype M12 (strain MGAS2096) STRPC 370551 STRPC Streptococcus pyogenes serotype M12 (strain MGAS9429) 67.000000 STRPF 370554 STRPF Streptococcus pyogenes serotype M4 (strain MGAS10750) 95.000000 STRP8 301451 STRP8 Streptococcus pyogenes (serotype M18) STRP6 301450 STRP6 Streptococcus pyogenes (serotype M6) STRMU 1309 STRMU Streptococcus mutans 100.000000 100.000000 STAS1 342451 STAS1 Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) 100.000000 67.000000 100.000000 STAES 176280 STAES Staphylococcus epidermidis (strain ATCC 12228) STAEQ 176279 STAEQ Staphylococcus epidermidis (strain ATCC 35984 / RP62A) 100.000000 STAAR 282458 STAAR Staphylococcus aureus (strain MRSA252) 88.000000 STAAB 273036 STAAB Staphylococcus aureus (strain bovine RF122) 98.000000 91.000000 100.000000 64.000000 STAA8 93061 STAA8 Staphylococcus aureus (strain NCTC 8325) STAAC 93062 STAAC Staphylococcus aureus (strain COL) STAA3 367830 STAA3 Staphylococcus aureus (strain USA300) 100.000000 STAAS 282459 STAAS Staphylococcus aureus (strain MSSA476) STAAW 196620 STAAW Staphylococcus aureus (strain MW2) 100.000000 STAAN 158879 STAAN Staphylococcus aureus (strain N315) STAAM 158878 STAAM Staphylococcus aureus (strain Mu50 / ATCC 700699) STAHJ 279808 STAHJ Staphylococcus haemolyticus (strain JCSC1435) 100.000000 100.000000 LISIN 1642 LISIN Listeria innocua 100.000000 LISMF 265669 LISMF Listeria monocytogenes (serotype 4b / strain F2365) LISMO 1639 LISMO Listeria monocytogenes 100.000000 OCEIH 182710 OCEIH Oceanobacillus iheyensis 100.000000 100.000000 BACSK 66692 BACSK Bacillus clausii (strain KSM-K16) BACHD 86665 BACHD Bacillus halodurans 100.000000 GEOKA 1462 GEOKA Geobacillus kaustophilus 72.000000 100.000000 BACCR 226900 BACCR Bacillus cereus (strain ATCC 14579 / DSM 31) 100.000000 BACC1 222523 BACC1 Bacillus cereus (strain ATCC 10987) 100.000000 BACCZ 288681 BACCZ Bacillus cereus (strain ZK) 62.000000 BACHK 180856 BACHK Bacillus thuringiensis (subsp. konkukian) BACAN 1392 BACAN Bacillus anthracis 100.000000 BACLD 279010 BACLD Bacillus licheniformis (strain DSM 13 / ATCC 14580) BACSU 1423 BACSU Bacillus subtilis