other Bacteria Other Bacteria (max Length) (only 1 isoform used) , Thu Feb 25 23:06:59 2010, 123 species, 36062 orthologs, 76 top groups, 181 used here, Weighted, BestSubset, DimlessQual: best: 1.4217, ave: 1.911 +- 0.010, var: 0.02379, Z=-3.17 2010-02-27T11:05:18+01:00 100.000000 FUSNN 190304 FUSNN Fusobacterium nucleatum subsp. nucleatum 66.000000 80.000000 63.000000 100.000000 UNCTG 471821 UNCTG Uncultured termite group 1 bacterium phylotype Rs-D17 ELUMP 445932 ELUMP Elusimicrobium minutum (strain Pei191) 100.000000 100.000000 100.000000 TREDE 158 TREDE Treponema denticola 100.000000 TREPS 455434 TREPS Treponema pallidum subsp. pallidum (strain SS14) TREPA 160 TREPA Treponema pallidum 100.000000 100.000000 67.000000 BORHD 314723 BORHD Borrelia hermsii (strain DAH) BORT9 314724 BORT9 Borrelia turicatae (strain 91E135) 100.000000 BORDL 412419 BORDL Borrelia duttonii (strain Ly) BORRA 412418 BORRA Borrelia recurrentis (strain A1) 100.000000 BORGA 29519 BORGA Borrelia garinii 88.000000 BORAP 390236 BORAP Borrelia afzelii (strain PKo) 100.000000 BORBZ 445985 BORBZ Borrelia burgdorferi (strain ZS7) BORBU 139 BORBU Borrelia burgdorferi Lyme disease spirochete 40.000000 100.000000 100.000000 LEPBP 456481 LEPBP Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) LEPBA 355278 LEPBA Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) 100.000000 100.000000 LEPBJ 355277 LEPBJ Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) LEPBL 355276 LEPBL Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) 100.000000 LEPIC 44275 LEPIC Leptospira interrogans (serogroup Icterohaemorrhagiae / serovar Copenhageni) LEPIN 189518 LEPIN Leptospira interrogans BRAHW 565034 BRAHW Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) 90.000000 95.000000 100.000000 FIBSS 59374 FIBSS Fibrobacter succinogenes (strain ATCC 19169 / S85) 100.000000 100.000000 CHLT3 517418 CHLT3 Chloroherpeton thalassium (strain ATCC 35110 / GB-78) 100.000000 100.000000 CHLPB 331678 CHLPB Chlorobium phaeobacteroides (strain BS1) PROA2 290512 PROA2 Prosthecochloris aestuarii (strain DSM 271 / SK 413) 100.000000 100.000000 100.000000 PROVI 290318 PROVI Prosthecochloris vibrioformis (strain DSM 265) PELLD 319225 PELLD Pelodictyon luteolum (strain DSM 273) 84.000000 84.000000 PELPB 324925 PELPB Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) CHLCH 340177 CHLCH Chlorobium chlorochromatii (strain CaD3) 100.000000 CHLPD 290317 CHLPD Chlorobium phaeobacteroides (strain DSM 266) CHLL2 290315 CHLL2 Chlorobium limicola (strain DSM 245 / NBRC 103803) 100.000000 CHLP8 517417 CHLP8 Chlorobaculum parvum (strain NCIB 8327) CHLTE 194439 CHLTE Chlorobium tepidum 88.000000 SALRD 309807 SALRD Salinibacter ruber (strain DSM 13855) 100.000000 SULMW 444179 SULMW Sulcia muelleri (strain GWSS) 100.000000 AMOA5 452471 AMOA5 Amoebophilus asiaticus (strain 5a2) 100.000000 67.000000 66.000000 PEDHD 485917 PEDHD Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) 100.000000 100.000000 100.000000 FLAJ1 376686 FLAJ1 Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) FLAPJ 402612 FLAPJ Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GRAFK 411154 GRAFK Gramella forsetii (strain KT0803) CAPOD 521097 CAPOD Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) 100.000000 AZOPC 511995 AZOPC Azobacteroides pseudotrichonymphae genomovar. CFP2 100.000000 100.000000 PARD8 435591 PARD8 Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) 100.000000 BACV8 435590 BACV8 Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) 100.000000 100.000000 BACFN 272559 BACFN Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) BACFR 817 BACFR Bacteroides fragilis BACTN 226186 BACTN Bacteroides thetaiotaomicron 100.000000 PORG3 431947 PORG3 Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) PORGI 837 PORGI Porphyromonas gingivalis Bacteroides gingivalis 100.000000 CYTH3 269798 CYTH3 Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) DYAFD 471854 DYAFD Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) 100.000000 100.000000 AKKM8 349741 AKKM8 Akkermansia muciniphila (strain ATCC BAA-835) 41.000000 OPITP 452637 OPITP Opitutus terrae (strain DSM 11246 / PB90-1) METI4 481448 METI4 Methylokorus infernorum (strain V4) 100.000000 PARUW 264201 PARUW Parachlamydia sp. (strain UWE25) (subsp. Acanthamoeba sp.) 100.000000 100.000000 100.000000 61.000000 CHLFF 264202 CHLFF Chlamydophila felis (strain Fe/C-56) CHLAB 83555 CHLAB Chlamydophila abortus CHLCV 83557 CHLCV Chlamydophila caviae CHLPN 83558 CHLPN Chlamydia pneumoniae 100.000000 100.000000 100.000000 CHLTB 471473 CHLTB Chlamydia trachomatis (strain L2b/UCH-1/proctitis) CHLT2 471472 CHLT2 Chlamydia trachomatis (strain L2/434/Bu / ATCC VR902B) 100.000000 100.000000 CHLTJ 580049 CHLTJ Chlamydia trachomatis (strain B/Jali20/OT) CHLTA 315277 CHLTA Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) CHLTR 813 CHLTR Chlamydia trachomatis CHLMU 83560 CHLMU Chlamydia muridarum 90.000000 RHOBA 265606 RHOBA Rhodopirellula baltica 85.000000 100.000000 100.000000 ACIC5 240015 ACIC5 Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) ACIBL 204669 ACIBL Acidobacteria bacterium (strain Ellin345) SOLUE 234267 SOLUE Solibacter usitatus (strain Ellin6076) 100.000000 100.000000 100.000000 100.000000 HERA2 316274 HERA2 Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) 100.000000 100.000000 100.000000 CHLSY 480224 CHLSY Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) CHLAA 324602 CHLAA Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) CHLAD 326427 CHLAD Chloroflexus aggregans (strain MD-66 / DSM 9485) 100.000000 ROSCS 383372 ROSCS Roseiflexus castenholzii (strain DSM 13941 / HLO8) ROSS1 357808 ROSS1 Roseiflexus sp. (strain RS-1) THERP 309801 THERP Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) 100.000000 100.000000 DEHSB 216389 DEHSB Dehalococcoides sp. (strain BAV1) DEHSC 255470 DEHSC Dehalococcoides sp. (strain CBDB1) DEHE1 243164 DEHE1 Dehalococcoides ethenogenes (strain 195) 100.000000 100.000000 THET8 300852 THET8 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) THET2 262724 THET2 Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) 100.000000 DEIGD 319795 DEIGD Deinococcus geothermalis (strain DSM 11300) 73.000000 DEIDV 546414 DEIDV Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) DEIRA 243230 DEIRA Deinococcus radiodurans 98.000000 99.000000 100.000000 DICT6 309799 DICT6 Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) DICTD 515635 DICTD Dictyoglomus turgidum (strain Z-1310 / DSM 6724) 100.000000 PETMO 403833 PETMO Petrotoga mobilis (strain DSM 10674 / SJ95) 100.000000 59.000000 100.000000 100.000000 THEM4 391009 THEM4 Thermosipho melanesiensis (strain BI429 / DSM 12029) THEAB 484019 THEAB Thermosipho africanus (strain TCF52B) FERNB 381764 FERNB Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) 100.000000 THEMA 243274 THEMA Thermotoga maritima 97.000000 THEP1 390874 THEP1 Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) THESQ 126740 THESQ Thermotoga sp. (strain RQ2) THELT 416591 THELT Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) 100.000000 100.000000 PERMH 123214 PERMH Persephonella marina (strain DSM 14350 / EX-H1) 100.000000 SULAA 204536 SULAA Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) SULSY 436114 SULSY Sulfurihydrogenibium sp. (strain YO3AOP1) 100.000000 HYDS0 380749 HYDS0 Hydrogenobaculum sp. (strain Y04AAS1) AQUAE 224324 AQUAE Aquifex aeolicus 100.000000 100.000000 100.000000 100.000000 MYCCR 45361 MYCCR Mycoplasma conjunctivae (strain ATCC 25834 / HRC/581 / NCTC 10147) 100.000000 MYCH7 262722 MYCH7 Mycoplasma hyopneumoniae (strain 7448) 84.000000 MYCHJ 262719 MYCHJ Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) MYCH2 295358 MYCH2 Mycoplasma hyopneumoniae (strain 232) 96.000000 43.000000 MYCA5 243272 MYCA5 Mycoplasma arthritidis (strain 158L3-1) MYCMO 2118 MYCMO Mycoplasma mobile 67.000000 MYCPU 2107 MYCPU Mycoplasma pulmonis 100.000000 MYCS5 262723 MYCS5 Mycoplasma synoviae (strain 53) MYCAP 347257 MYCAP Mycoplasma agalactiae (strain PG2) 73.000000 100.000000 100.000000 MYCCT 340047 MYCCT Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) MYCMS 44101 MYCMS Mycoplasma mycoides subsp. mycoides SC MESFL 2151 MESFL Mesoplasma florum Acholeplasma florum 100.000000 90.000000 100.000000 100.000000 UREP2 505682 UREP2 Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) UREPA 134821 UREPA Ureaplasma parvum Ureaplasma urealyticum biotype 1 UREU1 565575 UREU1 Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) MYCPE 28227 MYCPE Mycoplasma penetrans 100.000000 MYCGA 2096 MYCGA Mycoplasma gallisepticum 100.000000 MYCPN 272634 MYCPN Mycoplasma pneumoniae MYCGE 2097 MYCGE Mycoplasma genitalium 100.000000 ACHLI 441768 ACHLI Acholeplasma laidlawii (strain PG-8A) 100.000000 PHYMT 37692 PHYMT Phytoplasma mali (strain AT) 100.000000 PHYAS 59748 PHYAS Phytoplasma australiense 100.000000 AYWBP 322098 AYWBP Aster yellows witches'-broom phytoplasma (strain AYWB) ONYPE 100379 ONYPE Onion yellows phytoplasma