Status of the OMA Orthologs Project

Currently in the all-against-all

Recently added to the matrices

Finished all-all, but missing in matrices

The Latest Trees

Tree of Archaea

Color code: Crenarchaeota Methanomicrobia Halobacteria Methanococcaceae Thermococci Methanocaldococcaceae Methanobacteria Archaeoglobi Thermoplasmata Aciduliprofundum Methanopyri environmental samples Korarchaeota Nanoarchaeota Recently added: Oct 12: METMI - Methanococcus maripaludis Jun 30: METP4 - Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) Jun 15: VULDI - Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017)

Tree of Bacteria

Color code: Proteobacteria Firmicutes Actinobacteria Cyanobacteria Spirochaetes Bacteroidetes Chlamydiae Chlorobi Deinococcus-Thermus Acidobacteria Chloroflexi Aquificae Fusobacteria Planctomycetes Thermotogales Eukaryota Recently added: Error, 'cannot apply selector on object' List of Species Click on a 5-letter code for more information about a particular species "Maa" stands for "million amino acids" and "Coverage" indicates the percentage of sequences which form part of some orthologous group. Scientific Name # Seqs Maa Coverage ACAM1 Acaryochloris marina (strain MBIC 11017) 8148 2.25 60%   ACEP3 Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) 2885 0.94 82%   ACHLI Acholeplasma laidlawii (strain PG-8A) 1380 0.45 68%   ACHXA Achromobacter xylosoxidans (strain A8) 6798 2.23 90%   ACIAC Acidovorax citrulli (strain AAC00-1) 4601 1.56 91%   ACIAD Acinetobacter sp. (strain ADP1) 3307 1.05 89%   ACIAP Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) 4718 1.64 95%   ACIB1 Acinetobacter baumannii (strain 1656-2) 3743 1.14 93%   ACIB3 Acinetobacter baumannii (strain AB307-0294) 3452 1.08 96%   ACIB4 Aciduliprofundum boonei (strain DSM 19572 / T469) 1539 0.47 74%   ACIB5 Acinetobacter baumannii (strain AB0057) 3732 1.14 95%   ACIBC Acinetobacter baumannii (strain ACICU) 3743 1.15 95%   ACIBS Acinetobacter baumannii (strain SDF) 3287 0.94 83%   ACIBT Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) 3364 0.95 88%   ACIBY Acinetobacter baumannii (strain AYE) 3715 1.16 96%   ACIC1 Acidothermus cellulolyticus (strain ATCC 43068 / 11B) 2157 0.73 87%   ACIC5 Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) 3363 1.18 77%   ACICJ Acidiphilium cryptum (strain JF-5) 3518 1.17 82%   ACICP Acinetobacter calcoaceticus (strain PHEA-2) 3598 1.12 93%   ACIET Acidovorax ebreus (strain TPSY) 3460 1.12 97%   ACIF2 Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) 3119 0.88 82%   ACIF5 Acidithiobacillus ferrooxidans (strain ATCC 53993) 2745 0.83 92%   ACIFD Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) 1935 0.63 72%   ACIFV Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) 2015 0.67 80%   ACIS3 Acidilobus saccharovorans (strain DSM 16705 / VKM B-2471 / 345-15) 1499 0.45 80%   ACISJ Acidovorax sp. (strain JS42) 4042 1.30 95%   ACTMD Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) 6911 2.39 80%   ACTP2 Actinobacillus pleuropneumoniae serotype 5b (strain L20) 2002 0.65 99%   ACTP7 Actinobacillus pleuropneumoniae serotype 7 (strain AP76) 2109 0.67 97%   ACTPJ Actinobacillus pleuropneumoniae serotype 3 (strain JL03) 2024 0.64 97%   ACTSZ Actinobacillus succinogenes (strain ATCC 55618 / 130Z) 2077 0.68 97%   ACYPI Acyrthosiphon pisum (Pea aphid) 33992 10.59   29% AEDAE Aedes aegypti (Yellow fever mosquito) 15129 7.11 81%   AERHH Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) 4120 1.38 95%   AERPE Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) 1699 0.49 75%   AERS4 Aeromonas salmonicida (strain A449) 4302 1.34 92%   AGABI Agaricus bisporus (Common mushroom) 10366 4.43 62%   AGGAD Aggregatibacter actinomycetemcomitans serotype C (strain D11S-1) 2126 0.61 86%   AGGAN Aggregatibacter aphrophilus (strain NJ8700) 2224 0.66 86%   AGRRK Agrobacterium radiobacter (strain K84 / ATCC BAA-868) 6675 2.11 90%   AGRT5 Agrobacterium tumefaciens (strain C58 / ATCC 33970) 5347 1.66 89%   AGRVS Agrobacterium vitis (strain S4 / ATCC BAA-846) 5352 1.78 89%   AILME Ailuropoda melanoleuca (Giant panda) 19816 10.45 92%   AKKM8 Akkermansia muciniphila (strain ATCC BAA-835) 2137 0.77 66%   ALCBS Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) 2752 0.91 89%   ALHEH Alkalilimnicola ehrlichei (strain MLHE-1) 2862 0.98 90%   ALIAD Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) 3059 0.93 69%   ALISL Aliivibrio salmonicida (strain LFI1238) 3796 1.22 91%   ALKMQ Alkaliphilus metalliredigens (strain QYMF) 4463 1.32 80%   ALKOO Alkaliphilus oremlandii (strain OhILAs) 2828 0.87 90%   ALTMD Alteromonas macleodii (strain DSM 17117 / Deep ecotype) 4046 1.26 79%   AMICL Aminobacterium colombiense (strain DSM 12261 / ALA-1) 1872 0.60 85%   AMOA5 Amoebophilus asiaticus (strain 5a2) 1241 0.47 62%   AMPQE Amphimedon queenslandica 28464 11.41   36% ANAD2 Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) 4460 1.50 96%   ANADE Anaeromyxobacter dehalogenans (strain 2CP-C) 4344 1.52 95%   ANADF Anaeromyxobacter sp. (strain Fw109-5) 4461 1.58 87%   ANAMM Anaplasma marginale (strain St. Maries) 940 0.34 79%   ANAPD Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) 1795 0.59 80%   ANAPZ Anaplasma phagocytophilum (strain HZ) 1234 0.33 58%   ANASK Anaeromyxobacter sp. (strain K) 4444 1.52 97%   ANATD Anaerocellum thermophilum (strain DSM 6725 / Z-1320) 2648 0.83 88%   ANAVT Anabaena variabilis (strain ATCC 29413 / PCC 7937) 5624 1.91 93%   ANOCA Anolis carolinensis (Green anole) 18029 9.18 88%   ANOFW Anoxybacillus flavithermus (strain DSM 21510 / WK1) 2817 0.83 89%   ANOGA Anopheles gambiae (African malaria mosquito) 12499 5.95 79%   APIME Apis mellifera (Honeybee) 10378 5.61 81%   AQUAE Aquifex aeolicus (strain VF5) 1552 0.49 89%   ARALY Arabidopsis lyrata (Lyre-leaved rock-cress) 32085 11.69 74%   ARATH Arabidopsis thaliana (Thale cress / Mouse-ear cress) 27489 11.12 87%   ARCB4 Arcobacter butzleri (strain RM4018) 2254 0.72 83%   ARCFU Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) 2400 0.66 82%   ARCHD Arcanobacterium haemolyticum (strain ATCC 9345 / DSM 20595 / NBRC 15585 / NCTC 8452 / 11018) 1717 0.57 78%   ARCPA Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) 1818 0.48 78%   ARCVS Archaeoglobus veneficus (strain DSM 11195 / SNP6) 2064 0.56 83%   AROAE Aromatoleum aromaticum (strain EbN1) 4483 1.39 79%   ARTAT Arthrobacter aurescens (strain TC1) 4561 1.51 87%   ARTCA Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) 4586 1.47 84%   ARTS2 Arthrobacter sp. (strain FB24) 4453 1.49 91%   ASHGO Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (Yeast) 4707 2.31 87%   ASPFU Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) 9832 4.76 78%   ATOPD Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) 1353 0.46 81%   ATTCE Atta cephalotes (Leafcutter ant) 17766 6.33   49% AYWBP Aster yellows witches'-broom phytoplasma (strain AYWB) 681 0.18 71%   AZOC5 Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) 4706 1.60 90%   AZOPC Azobacteroides pseudotrichonymphae genomovar. CFP2 847 0.29 83%   AZOSB Azoarcus sp. (strain BH72) 3980 1.33 93%   AZOVD Azotobacter vinelandii (strain DJ / ATCC BAA-1303) 4985 1.52 83%   BACA2 Bacillus amyloliquefaciens (strain FZB42) 3691 1.15 94%   BACAA Bacillus anthracis (strain A0248) 5291 1.42 95%   BACAC Bacillus anthracis (strain CDC 684 / NRRL 3495) 5894 1.53 91%   BACAH Bacillus thuringiensis (strain Al Hakam) 4792 1.46 98%   BACAN Bacillus anthracis 5488 1.44 94%   BACC0 Bacillus cereus (strain AH820) 5798 1.56 92%   BACC1 Bacillus cereus (strain ATCC 10987) 5593 1.48 88%   BACC2 Bacillus cereus (strain G9842) 5844 1.59 87%   BACC3 Bacillus cereus (strain 03BB102) 5596 1.51 93%   BACC4 Bacillus cereus (strain B4264) 5394 1.51 93%   BACC7 Bacillus cereus (strain AH187) 5757 1.55 91%   BACCN Bacillus cereus subsp. cytotoxis (strain NVH 391-98) 3839 1.08 92%   BACCQ Bacillus cereus (strain Q1) 5458 1.52 93%   BACCR Bacillus cereus (strain ATCC 14579 / DSM 31) 5240 1.45 94%   BACCZ Bacillus cereus (strain ZK / E33L) 5133 1.48 98%   BACFN Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) 4302 1.55 91%   BACFR Bacteroides fragilis (strain YCH46) 4609 1.59 86%   BACHD Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) 4002 1.17 85%   BACHK Bacillus thuringiensis subsp. konkukian (strain 97-27) 5167 1.47 98%   BACLD Bacillus licheniformis (strain DSM 13 / ATCC 14580) 4135 1.20 91%   BACMS Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) 3248 1.07 57%   BACP2 Bacillus pumilus (strain SAFR-032) 3674 1.07 89%   BACPZ Bacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23) 4054 1.18 92%   BACSK Bacillus clausii (strain KSM-K16) 4102 1.23 87%   BACSU Bacillus subtilis (strain 168) 4104 1.22 92%   BACTN Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) 4771 1.86 79%   BACV8 Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) 3980 1.49 81%   BACWK Bacillus weihenstephanensis (strain KBAB4) 5650 1.59 93%   BARBK Bartonella bacilliformis (strain ATCC 35685 / KC583) 1251 0.38 86%   BARC7 Bartonella clarridgeiae (strain CIP 104772 / 73) 1363 0.41 82%   BARGA Bartonella grahamii (strain as4aup) 1705 0.56 93%   BARHE Bartonella henselae (strain ATCC 49882 / Houston 1) 1577 0.48 87%   BARQU Bartonella quintana (strain Toulouse) 1301 0.41 87%   BART1 Bartonella tribocorum (strain CIP 105476 / IBS 506) 1952 0.60 86%   BAUCH Baumannia cicadellinicola subsp. Homalodisca coagulata 595 0.19 97%   BDEBA Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) 3583 1.17 57%   BEII9 Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) 3774 1.21 85%   BEUC1 Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) 4195 1.43 86%   BIFA0 Bifidobacterium animalis subsp. lactis (strain AD011) 1525 0.54 97%   BIFAA Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) 1627 0.60 88%   BIFAB Bifidobacterium animalis subsp. lactis (strain BB-12) 1640 0.58 89%   BIFAS Bifidobacterium animalis subsp. lactis (strain DSM 10140 / JCM 10602 / LMG 18314) 1565 0.55 98%   BIFAV Bifidobacterium animalis subsp. lactis (strain V9) 1569 0.55 98%   BIFBA Bifidobacterium breve (strain ACS-071-V-Sch8b) 1821 0.64 89%   BIFBS Bifidobacterium bifidum (strain S17) 1783 0.62 81%   BIFDB Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) 2119 0.75 83%   BIFL1 Bifidobacterium longum subsp. infantis (strain 157F) 1972 0.68 88%   BIFL2 Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) 1906 0.68 88%   BIFLB Bifidobacterium animalis subsp. lactis (strain Bl-04 / DGCC2908 / RB 4825 / SD5219) 1566 0.55 98%   BIFLD Bifidobacterium longum (strain DJO10A) 1977 0.68 90%   BIFLJ Bifidobacterium longum subsp. longum (strain JDM301) 1944 0.70 91%   BIFLO Bifidobacterium longum (strain NCC 2705) 1723 0.64 92%   BLASB Blattabacterium sp. subsp. Blattella germanica (strain Bge) 587 0.20 97%   BLASP Blattabacterium sp. subsp. Periplaneta americana (strain BPLAN) 582 0.20 97%   BLOFL Blochmannia floridanus 589 0.20 96%   BLOPB Blochmannia pennsylvanicus (strain BPEN) 610 0.20 98%   BOMMO Bombyx mori (Silkworm) 14577 5.94 53%   BORA1 Bordetella avium (strain 197N) 3406 1.12 90%   BORAP Borrelia afzelii (strain PKo) 1261 0.36 84%   BORBN Borrelia burgdorferi (strain N40) 1233 0.38 97%   BORBR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) 4972 1.63 97%   BORBU Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) 1556 0.42 81%   BORBZ Borrelia burgdorferi (strain ZS7) 1223 0.37 95%   BORDL Borrelia duttonii (strain Ly) 1285 0.42 88%   BORGA Borrelia garinii (strain PBi) 1268 0.36 83%   BORHD Borrelia hermsii (strain DAH) 819 0.29 99%   BORPA Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) 4369 1.45 99%   BORPC Bordetella pertussis (strain CS) 3274 1.07 100%   BORPD Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) 4931 1.57 92%   BORPE Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) 3587 1.18 98%   BORRA Borrelia recurrentis (strain A1) 977 0.33 98%   BORT9 Borrelia turicatae (strain 91E135) 818 0.29 100%   BOTFB Botryotinia fuckeliana (strain B05.10) 16299 5.47   41% BOVIN Bos taurus (Bovine) 20310 10.85 93%   BRAFD Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) 3062 1.07 83%   BRAFL Branchiostoma floridae (Lancelet) 28464 13.24 53%   BRAHW Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) 2642 0.88 91%   BRAIP Brachyspira intermedia (strain ATCC 51140 / PWS/A) 2872 0.93 85%   BRAJA Bradyrhizobium japonicum (strain USDA 110) 8251 2.62 83%   BRASB Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) 7561 2.40 91%   BRASO Bradyrhizobium sp. (strain ORS278) 6734 2.12 90%   BREBN Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) 5887 1.81 78%   BRESC Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) 3326 1.04 82%   BRUA1 Brucella abortus (strain S19) 2989 0.91 96%   BRUA2 Brucella abortus (strain 2308) 3329 0.95 93%   BRUAB Brucella abortus biovar 1 (strain 9-941) 3072 0.89 95%   BRUC2 Brucella canis (strain ATCC 23365 / NCTC 10854) 3235 0.93 95%   BRUMB Brucella melitensis biotype 2 (strain ATCC 23457) 3120 0.90 96%   BRUMC Brucella microti (strain CCM 4915) 3269 0.96 95%   BRUME Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) 3179 0.95 95%   BRUO2 Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) 2819 0.85 95%   BRUSI Brucella suis (strain ATCC 23445 / NCTC 10510) 3213 0.92 95%   BRUSU Brucella suis biovar 1 (strain 1330) 3246 0.93 94%   BUCA5 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) 555 0.18 100%   BUCAI Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) 571 0.19 99%   BUCAJ Buchnera aphidicola subsp. Acyrthosiphon pisum (strain JF98) 477 0.12 87%   BUCAP Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) 560 0.18 98%   BUCAT Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) 553 0.18 100%   BUCBP Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) 507 0.17 97%   BUCCC Buchnera aphidicola subsp. Cinara cedri (strain Cc) 365 0.12 90%   BURA4 Burkholderia ambifaria (strain MC40-6) 6689 2.19 95%   BURCA Burkholderia cenocepacia (strain AU 1054) 6450 2.09 99%   BURCC Burkholderia cenocepacia (strain MC0-3) 6984 2.29 97%   BURCH Burkholderia cenocepacia (strain HI2424) 6897 2.23 98%   BURCJ Burkholderia cepacia (strain J2315 / LMG 16656) 7120 2.31 96%   BURCM Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) 6607 2.18 96%   BURGB Burkholderia glumae (strain BGR1) 5656 1.93 92%   BURM1 Burkholderia multivorans (strain ATCC 17616 / 249) 6189 2.00 94%   BURM7 Burkholderia mallei (strain NCTC 10247) 5617 1.63 91%   BURM9 Burkholderia mallei (strain NCTC 10229) 5308 1.60 92%   BURMA Burkholderia mallei (strain ATCC 23344) 4797 1.51 90%   BURMS Burkholderia mallei (strain SAVP1) 4975 1.47 91%   BURP0 Burkholderia pseudomallei (strain 1106a) 7146 2.07 85%   BURP1 Burkholderia pseudomallei (strain 1710b) 6310 2.45 87%   BURP6 Burkholderia pseudomallei (strain 668) 7214 2.07 84%   BURP8 Burkholderia phymatum (strain DSM 17167 / STM815) 7461 2.42 89%   BURPP Burkholderia phytofirmans (strain DSM 17436 / PsJN) 7197 2.32 93%   BURPS Burkholderia pseudomallei (strain K96243) 5838 2.01 97%   BURS3 Burkholderia sp. (strain 383) 7706 2.52 94%   BURSG Burkholderia sp. (strain CCGE1003) 5983 2.00 95%   BURTA Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) 5525 1.92 92%   BURVG Burkholderia vietnamiensis (strain G4 / LMG 22486) 7401 2.32 86%   BURXL Burkholderia xenovorans (strain LB400) 8589 2.75 88%   BUTPB Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) 3799 1.30 65%   CAEBE Caenorhabditis brenneri 25385 9.69 60%   CAEBR Caenorhabditis briggsae 19236 7.96 78%   CAEEL Caenorhabditis elegans 20756 8.52 76%   CAEJA Caenorhabditis japonica (Nematode) 18971 7.37 64%   CAERE Caenorhabditis remanei 31096 12.57 62%   CALH1 Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) 2521 0.81 94%   CALJA Callithrix jacchus (White-tufted-ear marmoset) 23998 11.78 79%   CALMQ Caldivirga maquilingensis (strain ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167) 1962 0.60 83%   CALNY Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) 2089 0.68 89%   CALOW Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) 2132 0.69 94%   CALS8 Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) 2619 0.83 90%   CAMC1 Campylobacter concisus (strain 13826) 2060 0.62 82%   CAMC5 Campylobacter curvus (strain 525.92) 1928 0.57 86%   CAMFF Campylobacter fetus subsp. fetus (strain 82-40) 1715 0.53 87%   CAMHC Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) 1687 0.48 73%   CAMJ8 Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) 1622 0.51 98%   CAMJC Campylobacter jejuni subsp. jejuni serotype HS:41 (strain ICDCCJ07001) 1530 0.48 94%   CAMJD Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) 1710 0.50 87%   CAMJE Campylobacter jejuni subsp. jejuni serotype O:2 (strain NCTC 11168) 1642 0.52 98%   CAMJI Campylobacter jejuni subsp. jejuni (strain IA3902) 1665 0.51 98%   CAMJJ Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) 1747 0.53 94%   CAMJM Campylobacter jejuni subsp. jejuni serotype HS21 (strain M1 / 99/308) 1617 0.50 97%   CAMJR Campylobacter jejuni (strain RM1221) 1832 0.54 90%   CAMLR Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) 1545 0.49 93%   CANAW Candida albicans (strain WO-1) 5695 2.74 85%   CANFA Canis familiaris (Dog) 20610 11.16 87%   CANGA Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (Yeast) 4752 2.42 86%   CAPI1 Capitella sp. 1 31562 11.37   49% CAPOD Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) 2170 0.75 79%   CARHZ Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) 2598 0.72 77%   CARRP Carsonella ruddii (strain PV) 182 0.05   46% CATAD Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) 8908 3.09 75%   CAUCN Caulobacter crescentus (strain NA1000 / CB15N) 3852 1.22 95%   CAUCR Caulobacter crescentus (strain ATCC 19089 / CB15) 3714 1.20 95%   CAUSK Caulobacter sp. (strain K31) 5371 1.71 87%   CAUST Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) 4136 1.35 93%   CAVPO Cavia porcellus (Guinea pig) 18940 10.00 92%   CELJU Cellvibrio japonicus (strain Ueda107) 3712 1.37 82%   CENSY Cenarchaeum symbiosum (strain A) 2013 0.62 61%   CHICK Gallus gallus (Chicken) 17437 8.36 84%   CHIPD Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) 7179 2.68 73%   CHLAA Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) 3850 1.41 99%   CHLAB Chlamydophila abortus (strain S26/3) 960 0.34 98%   CHLAD Chloroflexus aggregans (strain MD-66 / DSM 9485) 3725 1.35 92%   CHLCH Chlorobium chlorochromatii (strain CaD3) 1990 0.75 91%   CHLCV Chlamydophila caviae (strain GPIC) 1005 0.35 94%   CHLFF Chlamydophila felis (strain Fe/C-56) 1012 0.36 95%   CHLL2 Chlorobium limicola (strain DSM 245 / NBRC 103803) 2419 0.79 91%   CHLMU Chlamydia muridarum (strain MoPn / Nigg) 911 0.32 94%   CHLP6 Chlamydophila psittaci (strain ATCC VR-125 / 6BC) 975 0.35 96%   CHLP8 Chlorobaculum parvum (strain NCIB 8327) 2044 0.66 95%   CHLPB Chlorobium phaeobacteroides (strain BS1) 2434 0.74 88%   CHLPD Chlorobium phaeobacteroides (strain DSM 266) 2579 0.85 89%   CHLPN Chlamydia pneumoniae 1051 0.36 91%   CHLPP Chlamydophila pneumoniae (strain LPCoLN) 1105 0.37 88%   CHLRE Chlamydomonas reinhardtii 16900 12.13   32% CHLSY Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) 4153 1.43 92%   CHLT0 Chlamydia trachomatis serovar G (strain G/11222) 927 0.31 97%   CHLT2 Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B) 898 0.31 99%   CHLT3 Chloroherpeton thalassium (strain ATCC 35110 / GB-78) 2708 0.95 79%   CHLT7 Chlamydia trachomatis serovar G (strain G/9768) 920 0.31 97%   CHLTA Chlamydia trachomatis serovar A (strain HAR-13 / ATCC VR-571B) 919 0.32 98%   CHLTB Chlamydia trachomatis serovar L2b (strain UCH-1/proctitis) 897 0.31 99%   CHLTD Chlamydia trachomatis serovar D (strain D-EC) 878 0.31 99%   CHLTE Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) 2251 0.63 80%   CHLTJ Chlamydia trachomatis serovar B (strain Jali20/OT) 900 0.32 99%   CHLTR Chlamydia trachomatis (strain D/UW-3/Cx) 895 0.31 99%   CHOHO Choloepus hoffmanni (Hoffmann's two-fingered sloth) 12329 5.44 89%   CHRSD Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) 3298 1.10 89%   CHRVO Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) 4400 1.40 82%   CIOIN Ciona intestinalis (Transparent sea squirt) 16500 5.40 58%   CIOSA Ciona savignyi (Pacific transparent sea squirt) 13936 5.29 56%   CITK8 Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) 5017 1.44 83%   CITRI Citrobacter rodentium (strain ICC168) 4961 1.55 91%   CLAM3 Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) 3107 1.01 93%   CLAMS Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) 3166 1.00 88%   CLOAB Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) 3849 1.18 99%   CLOAE Clostridium acetobutylicum (strain EA 2018) 3912 1.19 98%   CLOB1 Clostridium botulinum (strain ATCC 19397 / Type A) 3547 1.04 95%   CLOB6 Clostridium botulinum (strain 657 / Type Ba4) 3977 1.13 92%   CLOB8 Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) 5003 1.58 86%   CLOBA Clostridium botulinum (strain Alaska E43 / Type E3) 3253 1.00 92%   CLOBB Clostridium botulinum (strain Eklund 17B / Type B) 3525 1.05 88%   CLOBH Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) 3669 1.06 94%   CLOBJ Clostridium botulinum (strain Kyoto / Type A2) 3860 1.12 92%   CLOBK Clostridium botulinum (strain Okra / Type B1) 3850 1.10 93%   CLOBL Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) 3633 1.07 94%   CLOBM Clostridium botulinum (strain Loch Maree / Type A3) 3982 1.15 91%   CLOCE Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) 3286 1.14 79%   CLOD6 Clostridium difficile (strain 630) 3744 1.18 94%   CLODR Clostridium difficile (strain R20291) 3542 1.14 98%   CLOK5 Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) 3823 1.11 79%   CLONN Clostridium novyi (strain NT) 2305 0.73 87%   CLOP1 Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) 2873 0.90 94%   CLOPE Clostridium perfringens (strain 13 / Type A) 2722 0.86 95%   CLOPH Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) 3889 1.31 79%   CLOPS Clostridium perfringens (strain SM101 / Type A) 2566 0.79 93%   CLOTE Clostridium tetani (strain Massachusetts / E88) 2414 0.81 89%   CLOTH Clostridium thermocellum (strain ATCC 27405 / DSM 1237) 3102 1.04 93%   CLOTL Clostridium thermocellum (strain DSM 1313 / LMG 6656 / LQ8) 2881 0.97 94%   COLP3 Colwellia psychrerythraea (strain 34H / ATCC BAA-681) 4868 1.50 77%   COPPD Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) 1481 0.44 69%   CORA7 Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) 2504 0.81 82%   CORAD Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) 3109 1.12 69%   CORDI Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) 2311 0.74 84%   COREF Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) 2933 0.96 84%   CORGB Corynebacterium glutamicum (strain R) 3076 0.96 90%   CORGL Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) 3092 0.96 86%   CORJK Corynebacterium jeikeium (strain K411) 2046 0.71 88%   CORK4 Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) 2018 0.71 81%   CORP2 Corynebacterium pseudotuberculosis (strain C231) 2053 0.66 94%   CORPF Corynebacterium pseudotuberculosis (strain FRC41) 2110 0.68 94%   CORU7 Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) 2009 0.70 86%   COXB2 Coxiella burnetii (strain CbuG_Q212) 1826 0.51 87%   COXBN Coxiella burnetii (strain Dugway 5J108-111) 2110 0.62 83%   COXBR Coxiella burnetii (strain RSA 331 / Henzerling II) 1889 0.51 84%   COXBU Coxiella burnetii (strain RSA 493 / Nine Mile phase I) 1814 0.51 90%   CROAH Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) 2701 0.91 87%   CROS8 Cronobacter sakazakii (strain ATCC BAA-894) 4255 1.29 87%   CRYCD Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) 1355 0.47 83%   CRYNE Cryptococcus neoformans 6231 3.34 65%   CRYPV Cryptosporidium parvum 3804 2.27   37% CULQU Culex quinquefasciatus (Southern house mosquito) 18642 8.20 65%   CUPNH Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) 6613 2.16 94%   CUPPJ Cupriavidus pinatubonensis (strain JMP134 / LMG 1197) 6433 2.11 93%   CUPTR Cupriavidus taiwanensis (strain R1 / LMG 19424) 5900 1.89 92%   CYAA5 Cyanothece sp. (strain ATCC 51142) 5233 1.56 81%   CYAP0 Cyanothece sp. (strain PCC 8802) 4403 1.34 95%   CYAP2 Cyanothece sp. (strain PCC 7822) 6557 2.14 81%   CYAP4 Cyanothece sp. (strain PCC 7425 / ATCC 29141) 5231 1.61 80%   CYAP7 Cyanothece sp. (strain PCC 7424) 5652 1.75 87%   CYAP8 Cyanothece sp. (strain PCC 8801) 4335 1.34 96%   CYTH3 Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) 3770 1.33 71%   DANRE Danio rerio (Zebrafish) 27505 14.35 80%   DAPPU Daphnia pulex (Water flea) 30088 9.92   34% DASNO Dasypus novemcinctus (Nine-banded armadillo) 14624 6.36 88%   DEBHA Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) 6263 3.00 84%   DECAR Dechloromonas aromatica (strain RCB) 4149 1.37 88%   DEFDS Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) 2353 0.77 82%   DEHE1 Dehalococcoides ethenogenes (strain 195) 1500 0.42 88%   DEHSB Dehalococcoides sp. (strain BAV1) 1355 0.40 95%   DEHSC Dehalococcoides sp. (strain CBDB1) 1453 0.42 92%   DEHSV Dehalococcoides sp. (strain VS) 1426 0.42 94%   DEIDV Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) 3446 1.08 84%   DEIGD Deinococcus geothermalis (strain DSM 11300) 2821 0.90 89%   DEIRA Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) 3084 0.95 80%   DELAS Delftia acidovorans (strain DSM 14801 / SPH-1) 5966 2.00 88%   DESAA Desulfatibacillum alkenivorans (strain AK-01) 5192 1.87 75%   DESAH Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) 4777 1.62 79%   DESAP Desulforudis audaxviator (strain MP104C) 2135 0.66 84%   DESAS Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) 4016 1.20 75%   DESAT Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) 2595 0.90 84%   DESBD Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) 3421 1.17 87%   DESDG Desulfovibrio desulfuricans (strain G20) 3719 1.11 76%   DESHD Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) 4852 1.50 90%   DESHY Desulfitobacterium hafniense (strain Y51) 5015 1.60 90%   DESIS Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) 2551 0.85 80%   DESK1 Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) 1470 0.40 87%   DESM0 Desulfurococcus mucosus (strain ATCC 35584 / DSM 2162 / JCM 9187 / O7/1) 1345 0.39 95%   DESMR Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) 4663 1.53 72%   DESOH Desulfococcus oleovorans (strain DSM 6200 / Hxd3) 3255 1.15 83%   DESPD Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) 3259 1.12 84%   DESPS Desulfotalea psychrophila (strain LSv54 / DSM 12343) 3236 1.04 76%   DESRD Desulfohalobium retbaense (strain DSM 5692) 2455 0.80 86%   DESRM Desulfotomaculum reducens (strain MI-1) 3214 0.98 83%   DESVH Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) 3517 1.08 87%   DESVM Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) 3178 1.11 90%   DESVR Desulfovibrio vulgaris (strain RCH1) 3214 1.06 97%   DESVV Desulfovibrio vulgaris subsp. vulgaris (strain DP4) 3084 1.04 96%   DICD3 Dickeya dadantii (strain 3937) 4550 1.42 89%   DICDC Dickeya dadantii (strain Ech703) 3960 1.32 95%   DICDI Dictyostelium discoideum (Slime mold) 12921 6.88 64%   DICNV Dichelobacter nodosus (strain VCS1703A) 1273 0.42 79%   DICPU Dictyostelium purpureum (Slime mold) 12317 5.96 66%   DICT6 Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) 1912 0.61 91%   DICTD Dictyoglomus turgidum (strain Z-1310 / DSM 6724) 1743 0.57 96%   DICZE Dickeya zeae (strain Ech1591) 4130 1.35 95%   DINSH Dinoroseobacter shibae (strain DFL 12) 4074 1.29 87%   DIPOR Dipodomys ordii (Ord's kangaroo rat) 15718 7.84 94%   DROGR Drosophila grimshawi (Fruit fly) 14604 7.35 86%   DROME Drosophila melanogaster (Fruit fly) 14506 7.82 87%   DROPS Drosophila pseudoobscura pseudoobscura (Fruit Fly) 9818 5.10 94%   DROVI Drosophila virilis (Fruit fly) 14351 7.21 87%   DROWI Drosophila willistoni 15245 7.45 80%   DYAFD Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) 5703 2.08 80%   ECHTE Echinops telfairi (Lesser hedgehog tenrec) 16499 7.36 87%   ECO10 Escherichia coli O103:H2 (strain 12009 / EHEC) 5178 1.57 96%   ECO1A Escherichia coli O111:H- (strain 11128 / EHEC) 5537 1.64 94%   ECO24 Escherichia coli O139:H28 (strain E24377A / ETEC) 4912 1.47 91%   ECO27 Escherichia coli O127:H6 (strain E2348/69 / EPEC) 4755 1.46 95%   ECO45 Escherichia coli O45:K1 (strain S88 / ExPEC) 4947 1.51 97%   ECO55 Escherichia coli (strain 55989 / EAEC) 4937 1.52 97%   ECO57 Escherichia coli O157:H7 5263 1.60 95%   ECO5E Escherichia coli O157:H7 (strain EC4115 / EHEC) 5272 1.54 92%   ECO5T Escherichia coli O157:H7 (strain TW14359 / EHEC) 5241 1.57 96%   ECO7I Escherichia coli O7:K1 (strain IAI39 / ExPEC) 4689 1.47 96%   ECO81 Escherichia coli O81 (strain ED1a) 5132 1.54 94%   ECO8A Escherichia coli O8 (strain IAI1) 4414 1.38 97%   ECOAB Escherichia coli OR:K5:H- (strain ABU 83972) 4784 1.50 96%   ECOBB Escherichia coli (strain B / BL21) 4157 1.32 96%   ECOBD Escherichia coli (strain B / BL21-DE3) 4156 1.30 98%   ECOBR Escherichia coli (strain B / REL606) 4141 1.32 98%   ECOBW Escherichia coli (strain K12 / MC4100 / BW2952) 4040 1.29 98%   ECOD1 Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1) 4123 1.31 99%   ECODH Escherichia coli (strain K12 / DH10B) 4050 1.27 98%   ECOHS Escherichia coli O9:H4 (strain HS) 4310 1.32 94%   ECOK1 Escherichia coli O1:K1 / APEC 4864 1.59 97%   ECOL5 Escherichia coli O6:K15:H31 (strain 536 / UPEC) 4657 1.45 96%   ECOL6 Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) 5336 1.56 92%   ECOLC Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) 4171 1.35 99%   ECOLI Escherichia coli (strain K12) 4352 1.37 98%   ECOLU Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) 5054 1.57 96%   ECOLX Escherichia coli 5430 1.47 88%   ECOS5 Escherichia coli O150:H5 (strain SE15) 4461 1.41 98%   ECOSE Escherichia coli (strain SE11) 4982 1.51 95%   ECOSM Escherichia coli (strain SMS-3-5 / SECEC) 4876 1.50 94%   ECOUT Escherichia coli (strain UTI89 / UPEC) 5191 1.56 96%   EDWI9 Edwardsiella ictaluri (strain 93-146) 3724 1.05 81%   EDWTE Edwardsiella tarda (strain EIB202) 3568 1.07 89%   EDWTF Edwardsiella tarda (strain FL6-60) 3251 1.04 96%   EHRCJ Ehrlichia canis (strain Jake) 921 0.31 89%   EHRCR Ehrlichia chaffeensis (strain Arkansas) 1097 0.31 74%   EHRRG Ehrlichia ruminantium (strain Gardel) 949 0.32 96%   EHRRW Ehrlichia ruminantium (strain Welgevonden) 958 0.32 96%   ELUMP Elusimicrobium minutum (strain Pei191) 1528 0.49 65%   EMENI Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) 10510 5.07 77%   EMIHU Emiliania huxleyi 31454 11.17   21% ENCCU Encephalitozoon cuniculi (strain GB-M1) 1895 0.69   35% ENT38 Enterobacter sp. (strain 638) 4236 1.36 97%   ENTAK Enterobacter aerogenes (strain ATCC 13048 / DSM 30053 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006) 4909 1.53 93%   ENTAL Enterobacter asburiae (strain LF7a) 4599 1.47 95%   ENTCS Enterobacter cloacae (strain SCF1) 4393 1.42 96%   ENTFA Enterococcus faecalis (strain ATCC 700802 / V583) 3239 0.95 73%   ERIEU Erinaceus europaeus (Western European hedgehog) 14488 6.65 91%   ERWCT Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) 4478 1.45 94%   ERWPE Erwinia pyrifoliae (strain Ep1/96) 3673 1.14 88%   ERWT9 Erwinia tasmaniensis (strain DSM 17950 / Et1/99) 3691 1.16 91%   ERYLH Erythrobacter litoralis (strain HTCC2594) 2999 0.93 82%   EUBE2 Eubacterium eligens (strain ATCC 27750 / VPI C15-48) 2761 0.86 73%   EUBR3 Eubacterium rectale (strain ATCC 33656 / VPI 0990) 3542 1.02 65%   EXIS2 Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) 3005 0.88 85%   EXISA Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) 3020 0.89 85%   FELCA Felis catus (Cat) 19623 10.29 92%   FERBD Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) 3781 1.26 88%   FERNB Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) 1725 0.58 88%   FERPA Ferroglobus placidus (strain DSM 10642 / AEDII12DO) 2463 0.66 80%   FIBSS Fibrobacter succinogenes (strain ATCC 19169 / S85) 3084 1.16 56%   FILAD Filifactor alocis (strain ATCC 35896 / D40 B5) 1614 0.52 79%   FINM2 Finegoldia magna (strain ATCC 29328) 1813 0.60 76%   FLAB3 Flavobacteriaceae bacterium (strain 3519-10) 2530 0.83 81%   FLAJ1 Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) 5016 1.77 82%   FLAPJ Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) 2428 0.81 86%   FLUTR Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) 4016 1.39 64%   FRAAA Frankia alni (strain ACN14a) 6723 2.16 73%   FRADG Frankia symbiont subsp. Datisca glomerata 4062 1.33 79%   FRAP2 Francisella philomiragia subsp. philomiragia (strain ATCC 25017) 1875 0.61 90%   FRASC Frankia sp. (strain CcI3) 4423 1.51 84%   FRASN Frankia sp. (strain EAN1pec) 7128 2.47 77%   FRAT1 Francisella tularensis subsp. tularensis (strain FSC 198) 1722 0.54 99%   FRATE Francisella tularensis subsp. tularensis (strain NE061598) 1707 0.49 93%   FRATF Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) 1508 0.46 97%   FRATH Francisella tularensis subsp. holarctica (strain LVS) 1869 0.53 88%   FRATM Francisella tularensis subsp. mediasiatica (strain FSC147) 1387 0.44 99%   FRATN Francisella tularensis subsp. novicida (strain U112) 1719 0.57 96%   FRATO Francisella tularensis subsp. holarctica (strain OSU18) 1506 0.45 97%   FRATT Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4) 1722 0.54 99%   FRATW Francisella tularensis subsp. tularensis (strain WY96-3418) 1573 0.48 97%   FUSNN Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) 2048 0.64 75%   GADMO Gadus morhua (Atlantic cod) 20479 9.36 87%   GALAU Gallibacterium anatis (strain UMN179) 2471 0.79 88%   GARV4 Gardnerella vaginalis (strain 409-05) 1256 0.46 79%   GASAC Gasterosteus aculeatus (Three-spined stickleback) 21773 11.05 87%   GEOBB Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) 4009 1.33 94%   GEOKA Geobacillus kaustophilus (strain HTA426) 3503 1.00 91%   GEOLS Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) 3643 1.20 85%   GEOMG Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) 3461 1.19 92%   GEOOG Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) 4795 1.49 81%   GEOS0 Geobacillus sp. (strain Y4.1MC1) 3602 1.03 91%   GEOS4 Geobacillus sp. (strain Y412MC10) 6237 2.03 85%   GEOSF Geobacter sp. (strain FRC-32) 3797 1.29 91%   GEOSL Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) 3415 1.13 89%   GEOSM Geobacter sp. (strain M21) 4067 1.36 94%   GEOSW Geobacillus sp. (strain WCH70) 3048 0.88 93%   GEOSY Geobacillus sp. (strain Y412MC61) 3414 1.00 93%   GEOTN Geobacillus thermodenitrificans (strain NG80-2) 3419 1.00 90%   GEOUR Geobacter uraniireducens (strain Rf4) 4253 1.45 90%   GIAIC Giardia intestinalis (strain ATCC 50803 / WB clone C6) 4740 2.64   23% GLOVI Gloeobacter violaceus (strain PCC 7421) 4406 1.38 73%   GLUDA Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) 3850 1.19 79%   GLUOX Gluconobacter oxydans (strain 621H) 2603 0.85 81%   GORB4 Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) 4546 1.48 83%   GORGO Gorilla gorilla gorilla (Lowland gorilla) 21822 11.02 88%   GRABC Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) 2435 0.82 84%   GRAFK Gramella forsetii (strain KT0803) 3554 1.14 83%   GUITH Guillardia theta 599 0.18 51%   HAEDU Haemophilus ducreyi (strain 35000HP / ATCC 700724) 1693 0.47 83%   HAEI2 Haemophilus influenzae (strain R2846 / 12) 1630 0.52 99%   HAEI6 Haemophilus influenzae (strain R2866) 1793 0.56 97%   HAEI8 Haemophilus influenzae (strain 86-028NP) 1788 0.55 97%   HAEIE Haemophilus influenzae (strain PittEE) 1618 0.48 94%   HAEIG Haemophilus influenzae (strain PittGG) 1665 0.47 92%   HAEIN Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) 1703 0.52 95%   HAEPS Haemophilus parasuis serovar 5 (strain SH0165) 1991 0.59 89%   HAES1 Haemophilus somnus (strain 129Pt) 1792 0.59 94%   HAES2 Haemophilus somnus (strain 2336) 1971 0.66 93%   HAHCH Hahella chejuensis (strain KCTC 2396) 6700 2.11 71%   HALHL Halorhodospira halophila (strain DSM 244 / SL1) 2405 0.82 88%   HALJB Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) 3779 1.01 76%   HALLT Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) 3493 1.01 81%   HALMA Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) 4225 1.20 80%   HALMD Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) 3168 0.90 86%   HALNC Halothiobacillus neapolitanus (strain ATCC 23641 / c2) 2353 0.76 85%   HALOH Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) 2324 0.74 82%   HALS3 Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) 2742 0.76 91%   HALSA Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) 2411 0.68 93%   HALTV Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) 3739 1.09 88%   HALUD Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) 2998 0.91 83%   HALVD Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) 3986 1.13 82%   HALWC Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) 2974 0.85 87%   HALWD Haloquadratum walsbyi (strain DSM 16790) 2819 0.80 87%   HALXS Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) 4221 1.23 87%   HAMD5 Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) 2039 0.56 67%   HELAH Helicobacter acinonychis (strain Sheeba) 1594 0.46 85%   HELHP Helicobacter hepaticus (strain ATCC 51449 / 3B1) 1872 0.56 74%   HELM1 Helicobacter mustelae (strain ATCC 43772 / LMG 18044 / NCTC 12198 / 12198) 1427 0.47 84%   HELMI Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) 2918 0.85 73%   HELP2 Helicobacter pylori (strain P12) 1573 0.50 95%   HELP3 Helicobacter pylori (strain B8) 1711 0.51 88%   HELP5 Helicobacter pylori (strain 52) 1403 0.46 98%   HELP9 Helicobacter pylori (strain 908) 1595 0.47 87%   HELPB Helicobacter pylori (strain B38) 1509 0.48 95%   HELPC Helicobacter pylori (strain Cuz20) 1563 0.49 94%   HELPF Helicobacter pylori (strain 35A) 1464 0.46 94%   HELPG Helicobacter pylori (strain G27) 1500 0.48 96%   HELPH Helicobacter pylori (strain HPAG1) 1539 0.49 94%   HELPJ Helicobacter pylori (strain J99) 1488 0.49 97%   HELPP Helicobacter pylori (strain PeCan4) 1563 0.48 92%   HELPR Helicobacter pylori (strain Lithuania75) 1559 0.48 91%   HELPS Helicobacter pylori (strain Shi470) 1564 0.48 91%   HELPV Helicobacter pylori (strain v225d) 1547 0.47 90%   HELPY Helicobacter pylori (strain ATCC 700392 / 26695) 1555 0.49 93%   HELRO Helobdella robusta 23263 8.76   42% HERA2 Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) 5254 1.96 69%   HERAR Herminiimonas arsenicoxydans 3321 1.00 89%   HIRBI Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) 3187 1.05 83%   HORSE Equus caballus (Horse) 20405 10.48 90%   HUMAN Homo sapiens (Human) 31540 13.33 68%   HYDS0 Hydrogenobaculum sp. (strain Y04AAS1) 1626 0.49 81%   HYDTT Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) 1892 0.56 87%   HYPBU Hyperthermus butylicus (strain DSM 5456 / JCM 9403) 1602 0.45 79%   HYPDA Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) 3449 1.05 74%   HYPNA Hyphomonas neptunium (strain ATCC 15444) 3499 1.11 82%   IDILO Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) 2608 0.86 90%   IGNAA Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) 1929 0.54 69%   IGNH4 Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) 1434 0.40 65%   IXOSC Ixodes scapularis (Tick) 20454 5.81   41% JANMA Janthinobacterium sp. (strain Marseille) 3695 1.22 93%   JANSC Jannaschia sp. (strain CCS1) 4269 1.32 82%   JONDD Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) 2495 0.82 82%   KINRD Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) 4673 1.49 77%   KLEP3 Klebsiella pneumoniae (strain 342) 5738 1.71 90%   KLEP7 Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) 5116 1.60 95%   KLEVT Klebsiella variicola (strain At-22) 5056 1.60 98%   KLULA Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (Yeast) 5230 2.48 84%   KOCRD Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) 2353 0.79 83%   KORCO Korarchaeum cryptofilum (strain OPF8) 1602 0.47 73%   KORVE Koribacter versatilis (strain Ellin345) 4770 1.68 75%   KRIFD Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) 6940 2.26 83%   KYTSD Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) 2531 0.81 79%   LACAC Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM) 1860 0.58 89%   LACAR Lactobacillus amylovorus (strain GRL 1112) 2020 0.59 83%   LACBA Lactobacillus brevis (strain ATCC 367 / JCM 1170) 2199 0.65 82%   LACBI Laccaria bicolor 20052 7.45   36% LACC3 Lactobacillus casei (strain ATCC 334) 2706 0.78 91%   LACCB Lactobacillus casei (strain BL23) 2999 0.86 90%   LACCS Lactobacillus crispatus (strain ST1) 2001 0.60 87%   LACDA Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) 2014 0.52 80%   LACDB Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) 1679 0.47 89%   LACDN Lactobacillus delbrueckii subsp. bulgaricus (strain ND02) 1997 0.58 83%   LACF3 Lactobacillus fermentum (strain NBRC 3956 / LMG 18251) 1818 0.55 91%   LACFC Lactobacillus fermentum (strain CECT 5716) 1041 0.39 95%   LACGA Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) 1694 0.54 93%   LACH4 Lactobacillus helveticus (strain DPC 4571) 1576 0.50 94%   LACJO Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533) 1812 0.59 91%   LACLA Lactococcus lactis subsp. lactis (strain IL1403) 2221 0.66 94%   LACLK Lactococcus lactis subsp. lactis (strain KF147) 2558 0.75 90%   LACLM Lactococcus lactis subsp. cremoris (strain MG1363) 2453 0.71 89%   LACLS Lactococcus lactis subsp. cremoris (strain SK11) 2436 0.68 88%   LACLV Lactococcus lactis subsp. lactis (strain CV56) 2362 0.68 91%   LACPJ Lactobacillus plantarum (strain JDM1) 2947 0.89 94%   LACPL Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) 3090 0.94 92%   LACRD Lactobacillus reuteri (strain DSM 20016) 1864 0.56 96%   LACRG Lactobacillus rhamnosus (strain ATCC 53103 / GG) 2877 0.84 91%   LACRJ Lactobacillus reuteri (strain JCM 1112) 1792 0.56 99%   LACRL Lactobacillus rhamnosus (strain Lc 705) 2952 0.86 91%   LACS1 Lactobacillus salivarius (strain UCC118) 2001 0.58 86%   LACSC Lactobacillus salivarius (strain CECT 5713) 1532 0.54 95%   LACSS Lactobacillus sakei subsp. sakei (strain 23K) 1871 0.54 82%   LAMPA Lama guanicoe pacos (Alpaca) 11671 5.48 91%   LARHH Laribacter hongkongensis (strain HLHK9) 3206 0.92 76%   LATCH Latimeria chalumnae (West Indian ocean coelacanth) 20358 10.46 87%   LAWIP Lawsonia intracellularis (strain PHE/MN1-00) 1344 0.48 82%   LEAB4 Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) 3426 1.20 83%   LEGLN Legionella longbeachae serogroup 1 (strain NSW150) 3646 1.19 72%   LEGPA Legionella pneumophila (strain Paris) 3059 1.02 95%   LEGPC Legionella pneumophila (strain Corby) 3204 1.03 92%   LEGPH Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) 2915 1.00 95%   LEGPL Legionella pneumophila (strain Lens) 2930 0.98 95%   LEIBR Leishmania braziliensis 8019 5.03 91%   LEIIN Leishmania infantum 8031 5.02 96%   LEIMA Leishmania major 7897 5.10 98%   LEIXX Leifsonia xyli subsp. xyli (strain CTCB07) 2003 0.59 77%   LEPBA Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) 3594 1.21 99%   LEPBD Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249) 2217 0.68 75%   LEPBJ Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) 2827 0.92 99%   LEPBL Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) 2871 0.94 99%   LEPBP Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) 3723 1.22 96%   LEPCP Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) 4343 1.50 89%   LEPIC Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) 3647 1.15 94%   LEPIN Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) 4687 1.21 74%   LEUCK Leuconostoc citreum (strain KM20) 1812 0.56 91%   LEUGT Leuconostoc gasicomitatum (strain DSM 15947 / CECT 5767 / JCM 12535 / LMG 18811 / TB1-10) 1910 0.57 87%   LEUMM Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) 2002 0.61 87%   LIBAP Liberibacter asiaticus (strain psy62) 1099 0.32 70%   LISIN Listeria innocua serovar 6a (strain CLIP 11262) 3032 0.91 95%   LISM2 Listeria monocytogenes serotype 1/2a (strain 08-5923) 2961 0.89 97%   LISMC Listeria monocytogenes serotype 4b (strain CLIP80459) 2789 0.86 99%   LISMF Listeria monocytogenes serotype 4b (strain F2365) 2818 0.85 97%   LISMH Listeria monocytogenes serotype 4a (strain HCC23) 2971 0.88 97%   LISML Listeria monocytogenes serotype 4a (strain L99) 2923 0.88 99%   LISMO Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) 2850 0.87 99%   LISW6 Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) 2775 0.83 94%   LODEL Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) 5772 2.94 79%   LOTGI Lottia gigantea (Limpet) 23514 8.96 57%   LOXAF Loxodonta africana (African elephant) 21050 10.71 88%   LYNSP Lyngbya sp. (strain PCC 8106) 6100 1.96 74%   LYSSC Lysinibacillus sphaericus (strain C3-41) 4750 1.28 72%   MACCJ Macrococcus caseolyticus (strain JCSC5402) 2059 0.64 85%   MACEU Macropus eugenii (Tammar wallaby) 15262 7.26 90%   MACMU Macaca mulatta (Rhesus macaque) 24770 11.35 77%   MAGGR Magnaporthe grisea (rice blast fungus) 12637 5.57 58%   MAGSA Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) 4511 1.45 73%   MAGSM Magnetococcus sp. (strain MC-1) 3589 1.33 71%   MAIZE Zea mays (Maize) 107258 23.46   24% MANES Manihot esculenta (Cassava) 32737 12.78 75%   MANSM Mannheimia succiniciproducens (strain MBEL55E) 2366 0.69 83%   MARAH Marinobacter adhaerens (strain HP15) 4406 1.39 86%   MARAV Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) 4168 1.39 89%   MARMM Maricaulis maris (strain MCS10) 3060 1.01 82%   MARMS Marinomonas sp. (strain MWYL1) 4415 1.48 88%   MEIRD Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) 2993 0.93 87%   MEISD Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) 2999 0.93 85%   MELGA Meleagris gallopavo (Common turkey) 14627 7.71 89%   MESCW Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) 6260 1.92 91%   MESFL Mesoplasma florum (strain ATCC 33453 / NBRC 100688 / NCTC 11704 / L1) 683 0.25 75%   MESSB Mesorhizobium sp. (strain BNC1) 4530 1.45 87%   META3 Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) 1490 0.44 94%   METAA Methylomicrobium alcaliphilum 3960 1.26 80%   METAC Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) 4463 1.39 78%   METB6 Methanoregula boonei (strain 6A8) 2450 0.73 81%   METBF Methanosarcina barkeri (strain Fusaro / DSM 804) 3600 1.12 87%   METBU Methanococcoides burtonii (strain DSM 6242) 2242 0.68 87%   METC4 Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) 5490 1.70 93%   METCA Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) 2925 0.97 84%   METCR Metallosphaera cuprina (strain Ar-4) 2029 0.54 87%   METCZ Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) 2448 0.70 90%   METEA Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) 6233 1.86 82%   METED Methylobacterium extorquens (strain DSM 5838 / DM4) 5882 1.71 90%   METEP Methylobacterium extorquens (strain PA1) 4822 1.53 95%   METEZ Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) 2248 0.67 84%   METFA Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) 1546 0.44 95%   METFK Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) 2608 0.85 91%   METHJ Methanospirillum hungatei (strain JF-1 / DSM 864) 3084 0.99 76%   METI4 Methylacidiphilum infernorum (isolate V4) 2470 0.69 57%   METIM Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) 1439 0.41 95%   METJA Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) 1782 0.50 92%   METKA Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) 1690 0.50 58%   METLZ Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) 1739 0.52 85%   METM5 Methanococcus maripaludis (strain C5 / ATCC BAA-1333) 1821 0.51 95%   METM6 Methanococcus maripaludis (strain C6 / ATCC BAA-1332) 1825 0.51 95%   METM7 Methanococcus maripaludis (strain C7 / ATCC BAA-1331) 1785 0.51 96%   METMA Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) 3298 1.00 89%   METMI Methanococcus maripaludis 1849 0.51 95%   METMJ Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) 2474 0.71 84%   METML Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) 2334 0.76 94%   METMP Methanococcus maripaludis (strain S2 / LL) 1722 0.49 98%   METMS Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) 1986 0.59 92%   METNO Methylobacterium nodulans (strain ORS2060 / LMG 21967) 8125 2.31 77%   METOI Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) 1583 0.46 92%   METP4 Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) 2779 0.83 79%   METPB Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) 5325 1.65 92%   METPE Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) 2655 0.82 80%   METPP Methylibium petroleiphilum (strain PM1) 4355 1.38 84%   METPS Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) 2992 0.85 86%   METRJ Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) 6385 1.94 84%   METRM Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) 2207 0.76 75%   METS0 Methylotenera sp. (strain 301) 2752 0.91 92%   METS3 Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) 1783 0.55 82%   METS4 Methylobacterium sp. (strain 4-46) 6646 2.08 88%   METS5 Metallosphaera sedula (strain ATCC 51363 / DSM 5348) 2256 0.64 93%   METSB Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) 3816 1.22 86%   METSD Methylovorus sp. (strain SIP3-4) 2906 0.93 88%   METSF Methanocaldococcus sp. (strain FS406-22) 1803 0.51 94%   METSL Methanobacterium sp. (strain AL-21) 2493 0.72 79%   METST Methanosphaera stadtmanae (strain DSM 3091) 1530 0.49 82%   METTH Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) 1868 0.52 89%   METTM Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) 1755 0.49 93%   METTP Methanosaeta thermophila (strain DSM 6194 / PT) 1673 0.51 81%   METV3 Methanococcus voltae (strain ATCC BAA-1334 / A3) 1657 0.50 83%   METVM Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) 1725 0.49 92%   METVS Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) 1661 0.48 96%   MICAI Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) 6203 2.09 95%   MICAN Microcystis aeruginosa (strain NIES-843) 5946 1.51 67%   MICMU Microcebus murinus (Lesser mouse lemur) 16223 7.67 94%   MICSL Micromonospora sp. (strain L5) 6129 2.07 96%   MONBE Monosiga brevicollis 9164 5.50   44% MONDO Monodelphis domestica (Gray short-tailed opossum) 21261 11.32 80%   MOOTA Moorella thermoacetica (strain ATCC 39073) 2450 0.75 87%   MOUSE Mus musculus (Mouse) 25600 12.29 80%   MURRD Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) 3471 1.16 84%   MUSPF Mustela putorius furo (European domestic ferret) 19905 10.63 88%   MYCA1 Mycobacterium avium (strain 104) 5035 1.58 90%   MYCA5 Mycoplasma arthritidis (strain 158L3-1) 631 0.24 75%   MYCA9 Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) 4939 1.57 85%   MYCAP Mycoplasma agalactiae (strain PG2) 748 0.26 85%   MYCBG Mycoplasma bovis (strain ATCC 25523 / PG45) 742 0.27 90%   MYCBO Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) 3939 1.31 99%   MYCBP Mycobacterium bovis (strain BCG / Pasteur 1173P2) 3924 1.31 99%   MYCBT Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) 3924 1.31 99%   MYCCM Mycoplasma crocodyli (strain ATCC 51981 / MP145) 689 0.25 78%   MYCCR Mycoplasma conjunctivae (strain ATCC 25834 / HRC/581 / NCTC 10147) 694 0.26 76%   MYCCT Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) 811 0.30 92%   MYCGA Mycoplasma gallisepticum (strain R(low / passage 15 / clone 2)) 726 0.29 98%   MYCGE Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) 483 0.18 96%   MYCGH Mycoplasma gallisepticum (strain R(high / passage 156)) 763 0.30 93%   MYCGI Mycobacterium gilvum (strain PYR-GCK) 5493 1.80 96%   MYCGR Mycosphaerella graminicola 10932 4.77 65%   MYCH2 Mycoplasma hyopneumoniae (strain 232) 682 0.27 91%   MYCH7 Mycoplasma hyopneumoniae (strain 7448) 657 0.26 96%   MYCHJ Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) 659 0.26 94%   MYCHL Mycoplasma haemofelis (strain Langford 1) 1545 0.36   15% MYCHP Mycoplasma hominis (strain ATCC 23114 / NBRC 14850 / NCTC 10111 / PG21) 536 0.20 84%   MYCL9 Mycoplasma leachii (strain 99/014/6) 902 0.30 95%   MYCLB Mycobacterium leprae (strain Br4923) 2691 0.83 99%   MYCLE Mycobacterium leprae (strain TN) 2691 0.83 99%   MYCLG Mycoplasma leachii (strain DSM 21131 / NCTC 10133 / N29 / PG50) 880 0.30 96%   MYCMM Mycobacterium marinum (strain ATCC BAA-535 / M) 5418 1.98 93%   MYCMO Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711) 635 0.24 74%   MYCMS Mycoplasma mycoides subsp. mycoides SC (strain PG1) 975 0.32 77%   MYCPA Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) 4317 1.46 95%   MYCPE Mycoplasma penetrans (strain HF-2) 1028 0.40 56%   MYCPN Mycoplasma pneumoniae (strain ATCC 29342 / M129) 686 0.24 72%   MYCPU Mycoplasma pulmonis (strain UAB CTIP) 778 0.29 72%   MYCS2 Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) 6593 2.08 88%   MYCS5 Mycoplasma synoviae (strain 53) 669 0.24 73%   MYCSJ Mycobacterium sp. (strain JLS) 5695 1.86 98%   MYCSK Mycobacterium sp. (strain KMS) 5889 1.90 98%   MYCSR Mycobacterium sp. (strain Spyr1) 5220 1.71 97%   MYCSS Mycobacterium sp. (strain MCS) 5586 1.82 99%   MYCTA Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) 3991 1.33 99%   MYCTF Mycobacterium tuberculosis (strain F11) 3855 1.30 99%   MYCTK Mycobacterium tuberculosis (strain KZN 1435 / MDR) 4021 1.33 98%   MYCTU Mycobacterium tuberculosis 3954 1.33 99%   MYCUA Mycobacterium ulcerans (strain Agy99) 4194 1.39 91%   MYCVP Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) 5901 1.95 94%   MYOLU Myotis lucifugus (Microbat) 19862 10.19 89%   MYXFH Myxococcus fulvus (strain ATCC BAA-855 / HW-1) 7225 2.62 86%   MYXXD Myxococcus xanthus (strain DK 1622) 7216 2.76 88%   NAEGR Naegleria gruberi (Amoeba) 15569 7.70   30% NAKMY Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) 5120 1.71 82%   NANEQ Nanoarchaeum equitans (strain Kin4-M) 536 0.15   48% NATMM Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) 3558 1.05 82%   NATPD Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) 2801 0.82 83%   NATTJ Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) 2836 0.89 78%   NAUPA Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) 1730 0.52 83%   NEIG1 Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) 1943 0.55 93%   NEIG2 Neisseria gonorrhoeae (strain NCCP11945) 2592 0.63 74%   NEIM0 Neisseria meningitidis serogroup C (strain 053442) 1998 0.57 93%   NEIM8 Neisseria meningitidis serogroup C (strain 8013) 2098 0.61 95%   NEIMA Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) 1971 0.59 96%   NEIMB Neisseria meningitidis serogroup B (strain MC58) 2001 0.58 93%   NEIMF Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) 1939 0.59 98%   NEIMH Neisseria meningitidis serogroup B / serotype 15 (strain H44/76) 1990 0.60 97%   NEIML Neisseria meningitidis (strain alpha14) 1911 0.57 94%   NEIMM Neisseria meningitidis serogroup B (strain M01-240149) 1960 0.59 96%   NEMVE Nematostella vectensis (Sea anemone) 26036 8.87 56%   NEORI Neorickettsia risticii (strain Illinois) 898 0.25 79%   NEOSM Neorickettsia sennetsu (strain Miyayama) 930 0.25 77%   NEUCR Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) 7569 3.68 64%   NITEC Nitrosomonas eutropha (strain C91) 2470 0.77 91%   NITEU Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) 2472 0.80 92%   NITHX Nitrobacter hamburgensis (strain X14 / DSM 10229) 4226 1.29 85%   NITMS Nitrosopumilus maritimus (strain SCM1) 1795 0.49 76%   NITMU Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) 2723 0.90 86%   NITOC Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) 2944 0.98 86%   NITSB Nitratiruptor sp. (strain SB155-2) 1857 0.59 88%   NITWN Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) 2956 0.92 90%   NOCDD Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) 5497 1.83 85%   NOCFA Nocardia farcinica (strain IFM 10152) 5943 1.89 82%   NOCSJ Nocardioides sp. (strain BAA-499 / JS614) 4884 1.59 80%   NOMLE Nomascus leucogenys (Northern white-cheeked gibbon) 19173 10.17 92%   NOSA0 Nostoc azollae (strain 0708) 3646 0.94 74%   NOSP7 Nostoc punctiforme (strain ATCC 29133 / PCC 73102) 6572 2.29 85%   NOSS1 Nostoc sp. (strain PCC 7120 / UTEX 2576) 6069 1.96 88%   NOVAD Novosphingobium aromaticivorans (strain DSM 12444) 3917 1.29 85%   OCEIH Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) 3492 1.02 85%   OCHA4 Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) 4757 1.50 91%   OCHPR Ochotona princeps (Southern American pika) 15868 7.78 93%   ODOSD Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) 3476 1.26 72%   OENOB Oenococcus oeni (strain ATCC BAA-331 / PSU-1) 1682 0.49 77%   OLICM Oligotropha carboxidovorans (strain OM4) 3561 1.11 98%   OLICO Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) 3845 1.13 90%   ONYPE Onion yellows phytoplasma (strain OY-M) 726 0.20 66%   OPITP Opitutus terrae (strain DSM 11246 / PB90-1) 4588 1.75 70%   ORENI Oreochromis niloticus (Nile tilapia) 22257 12.66 90%   ORITB Orientia tsutsugamushi (strain Boryong) 1804 0.50 56%   ORITI Orientia tsutsugamushi (strain Ikeda) 1625 0.44 68%   ORNAN Ornithorhynchus anatinus (Platypus) 19730 8.05 64%   ORYLA Oryzias latipes (Medaka fish) 20499 10.19 84%   ORYSJ Oryza sativa subsp. japonica (Rice) 58246 26.16   41% OSTLU Ostreococcus lucimarinus (strain CCE9901) 7410 2.99 78%   OSTTA Ostreococcus tauri 7860 3.38 59%   OTOGA Otolemur garnettii (Small-eared galago) 19514 10.54 91%   PAEPS Paenibacillus polymyxa (strain SC2) 6024 1.74 76%   PAESJ Paenibacillus sp. (strain JDR-2) 6209 2.10 82%   PAETH Paenibacillus terrae (strain HPL-003) 5516 1.70 85%   PANAA Pantoea ananatis (strain AJ13355) 3782 1.28 97%   PANAM Pantoea ananatis (strain LMG 20103) 4237 1.37 94%   PANTR Pan troglodytes (Chimpanzee) 18923 10.11 96%   PARD8 Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) 3831 1.44 82%   PARDP Paracoccus denitrificans (strain Pd 1222) 5015 1.56 84%   PARL1 Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) 3579 1.15 88%   PARUW Protochlamydia amoebophila (strain UWE25) 2024 0.66 55%   PASMU Pasteurella multocida (strain Pm70) 2014 0.67 95%   PECCP Pectobacterium carotovorum subsp. carotovorum (strain PC1) 4245 1.40 96%   PECWW Pectobacterium wasabiae (strain WPP163) 4431 1.42 93%   PEDHC Pediculus humanus subsp. corporis (Body louse) 10733 5.53 70%   PEDHD Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) 4249 1.59 84%   PEDPA Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) 1755 0.54 87%   PEDSD Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) 3780 1.37 86%   PELCD Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) 3340 1.06 81%   PELLD Pelodictyon luteolum (strain DSM 273) 2074 0.70 94%   PELPB Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) 2685 0.85 88%   PELPD Pelobacter propionicus (strain DSM 2379) 3691 1.20 84%   PELSI Pelodiscus sinensis (Chinese softshell turtle) 18318 9.44 88%   PELTS Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) 2878 0.85 81%   PELUB Pelagibacter ubique (strain HTCC1062) 1353 0.42 80%   PERMH Persephonella marina (strain DSM 14350 / EX-H1) 2047 0.62 82%   PETMO Petrotoga mobilis (strain DSM 10674 / SJ95) 1889 0.64 80%   PHANO Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) 16489 6.45   49% PHEZH Phenylobacterium zucineum (strain HLK1) 3837 1.28 90%   PHOAA Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77) 4343 1.39 84%   PHOLL Photorhabdus luminescens subsp. laumondii (strain TT01) 4766 1.54 84%   PHOPR Photobacterium profundum 5222 1.66 84%   PHYAS Phytoplasma australiense 780 0.21 59%   PHYMT Phytoplasma mali (strain AT) 462 0.15 74%   PICST Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) 5799 2.85 91%   PICTO Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) 1535 0.47 83%   PIGXX Sus scrofa (Pig) 21156 9.81 83%   PLAF7 Plasmodium falciparum (isolate 3D7) (Malaria parasite) 5503 4.10   33% PLAL2 Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) 4258 1.53 59%   POLNA Polaromonas naphthalenivorans (strain CJ2) 4873 1.56 87%   POLNS Polynucleobacter necessarius subsp. necessarius (strain STIR1) 1507 0.40 79%   POLSJ Polaromonas sp. (strain JS666 / ATCC BAA-500) 5436 1.71 88%   POLSQ Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) 2074 0.67 92%   PONAB Pongo abelii (Sumatran orangutan) 18420 9.17 92%   POPTR Populus trichocarpa (Western balsam poplar) 41297 15.36 64%   PORAD Porphyromonas asaccharolytica (strain ATCC 25260 / DSM 20707 / VPI 4198) 1672 0.63 76%   PORG3 Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) 2021 0.66 84%   PORGI Porphyromonas gingivalis (strain ATCC BAA-308 / W83) 1862 0.63 90%   PRIPA Pristionchus pacificus (Nematode) 29363 8.48   25% PROA2 Prosthecochloris aestuarii (strain DSM 271 / SK 413) 2319 0.75 90%   PROAC Propionibacterium acnes (strain KPA171202 / DSM 16379) 2294 0.76 76%   PROCA Procavia capensis (Cape hyrax) 16002 7.87 93%   PROM0 Prochlorococcus marinus (strain MIT 9301) 1906 0.50 92%   PROM1 Prochlorococcus marinus (strain NATL1A) 2173 0.54 89%   PROM2 Prochlorococcus marinus (strain MIT 9215) 1983 0.52 90%   PROM3 Prochlorococcus marinus (strain MIT 9303) 2983 0.76 72%   PROM4 Prochlorococcus marinus (strain MIT 9211) 1854 0.50 87%   PROM5 Prochlorococcus marinus (strain MIT 9515) 1899 0.50 91%   PROM9 Prochlorococcus marinus (strain MIT 9312) 1959 0.51 90%   PROMA Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) 1881 0.52 89%   PROMH Proteus mirabilis (strain HI4320) 3736 1.16 86%   PROMM Prochlorococcus marinus (strain MIT 9313) 2264 0.66 90%   PROMP Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) 1952 0.50 90%   PROMS Prochlorococcus marinus (strain AS9601) 1920 0.50 92%   PROMT Prochlorococcus marinus (strain NATL2A) 2141 0.53 90%   PROVI Prosthecochloris vibrioformis (strain DSM 265) 1750 0.59 96%   PSE14 Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) 5054 1.66 93%   PSEA6 Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) 4271 1.49 89%   PSEA7 Pseudomonas aeruginosa (strain PA7) 6246 1.95 91%   PSEA8 Pseudomonas aeruginosa (strain LESB58) 5937 1.94 97%   PSEAB Pseudomonas aeruginosa (strain UCBPP-PA14) 5886 1.94 98%   PSEAE Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) 5557 1.86 99%   PSEE4 Pseudomonas entomophila (strain L48) 5159 1.74 93%   PSEF1 Pseudomonas fulva (strain 12-X) 4459 1.45 95%   PSEF5 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) 6135 2.09 94%   PSEFS Pseudomonas fluorescens (strain SBW25) 6475 2.11 88%   PSEHT Pseudoalteromonas haloplanktis (strain TAC 125) 3479 1.12 91%   PSEMY Pseudomonas mendocina (strain ymp) 4563 1.50 95%   PSEP1 Pseudomonas putida (strain F1 / ATCC 700007) 5244 1.76 97%   PSEPF Pseudomonas fluorescens (strain Pf0-1) 5726 1.92 93%   PSEPG Pseudomonas putida (strain GB-1) 5396 1.80 95%   PSEPK Pseudomonas putida (strain KT2440) 5311 1.77 94%   PSEPW Pseudomonas putida (strain W619) 5179 1.71 96%   PSESM Pseudomonas syringae pv. tomato (strain DC3000) 5423 1.79 91%   PSEU2 Pseudomonas syringae pv. syringae (strain B728a) 5116 1.78 95%   PSEU5 Pseudomonas stutzeri (strain A1501) 4093 1.35 93%   PSEU9 Pseudoalteromonas sp. (strain SM9913) 3695 1.17 89%   PSEUU Pseudoxanthomonas suwonensis (strain 11-1) 3068 1.01 89%   PSYA2 Psychrobacter arcticus (strain DSM 17307 / 273-4) 2125 0.71 93%   PSYCK Psychrobacter cryohalolentis (strain K5) 2451 0.84 94%   PSYIN Psychromonas ingrahamii (strain 37) 3530 1.17 87%   PSYWF Psychrobacter sp. (strain PRwf-1) 2338 0.82 89%   PTEVA Pteropus vampyrus (Large flying fox) 16947 9.08 97%   PUCGT Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) (Black rust) 20364 7.51   19% PUNMI Puniceispirillum marinum (strain IMCC1322) 2545 0.83 79%   PUSST Pusillimonas sp. (strain T7-7) 3750 1.18 85%   PYRAB Pyrococcus abyssi (strain GE5 / Orsay) 1786 0.54 96%   PYRAE Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) 2600 0.66 82%   PYRAR Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) 2295 0.61 94%   PYRCJ Pyrobaculum calidifontis (strain JCM 11548 / VA1) 2148 0.61 92%   PYRF1 Pyrolobus fumarii (strain DSM 11204 / 1A) 1986 0.54 68%   PYRFU Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) 2052 0.58 88%   PYRHO Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) 2077 0.57 79%   PYRIL Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) 1976 0.53 90%   PYRKO Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) 2300 0.64 88%   PYROT Pyrobaculum oguniense (strain DSM 13380 / JCM 10595 / TE7) 2797 0.71 84%   PYRYC Pyrococcus yayanosii (strain CH1 / JCM 16557) 1865 0.51 89%   RABIT Oryctolagus cuniculus (Rabbit) 19738 10.12 89%   RALME Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) 6193 2.00 90%   RALP1 Ralstonia pickettii (strain 12D) 5314 1.64 91%   RALPJ Ralstonia pickettii (strain 12J) 4886 1.54 95%   RALS8 Ralstonia solanacearum (strain Po82) 4957 1.63 85%   RALSL Ralstonia solanacearum 1416 0.52 89%   RALSO Ralstonia solanacearum (strain GMI1000) 5015 1.66 92%   RATNO Rattus norvegicus (Rat) 22690 11.28 77%   RENSM Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235) 3420 0.93 70%   RHIE6 Rhizobium etli (strain CIAT 652) 6098 1.86 91%   RHIEC Rhizobium etli (strain CFN 42 / ATCC 51251) 5964 1.87 94%   RHIL3 Rhizobium leguminosarum bv. viciae (strain 3841) 7243 2.25 93%   RHILO Rhizobium loti (strain MAFF303099) 7247 2.17 85%   RHILS Rhizobium leguminosarum bv. trifolii (strain WSM1325) 6988 2.11 93%   RHILW Rhizobium leguminosarum bv. trifolii (strain WSM2304) 6403 1.98 95%   RHIME Rhizobium meliloti (strain 1021) 6119 1.89 92%   RHISN Rhizobium sp. (strain NGR234) 6254 1.94 88%   RHOBA Rhodopirellula baltica (strain SH1) 7256 2.29   43% RHOCB Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) 3631 1.16 86%   RHOCS Rhodospirillum centenum (strain ATCC 51521 / SW) 4019 1.27 79%   RHOE1 Rhodococcus equi (strain 103S) 4598 1.54 92%   RHOE4 Rhodococcus erythropolis (strain PR4 / NBRC 100887) 6424 2.09 88%   RHOFD Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) 4398 1.47 89%   RHOOB Rhodococcus opacus (strain B4) 8169 2.65 88%   RHOP2 Rhodopseudomonas palustris (strain HaA2) 4680 1.55 96%   RHOP5 Rhodopseudomonas palustris (strain BisA53) 4851 1.56 92%   RHOPA Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) 4829 1.59 97%   RHOPB Rhodopseudomonas palustris (strain BisB18) 4862 1.56 92%   RHOPS Rhodopseudomonas palustris (strain BisB5) 4388 1.41 95%   RHOPT Rhodopseudomonas palustris (strain TIE-1) 5242 1.65 94%   RHORT Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) 3836 1.29 86%   RHOS1 Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) 4111 1.31 96%   RHOS4 Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) 4122 1.30 95%   RHOS5 Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) 4198 1.30 90%   RHOSK Rhodobacter sphaeroides (strain KD131 / KCTC 12085) 4540 1.38 91%   RHOSR Rhodococcus sp. (strain RHA1) 9065 2.87 82%   RICAE Rickettsia africae (strain ESF-5) 1041 0.31 96%   RICAH Rickettsia akari (strain Hartford) 1255 0.31 72%   RICB8 Rickettsia bellii (strain OSU 85-389) 1441 0.40 88%   RICBR Rickettsia bellii (strain RML369-C) 1393 0.42 93%   RICCK Rickettsia canadensis (strain McKiel) 1091 0.29 74%   RICCN Rickettsia conorii (strain ATCC VR-613 / Malish 7) 1374 0.34 83%   RICFE Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) 1425 0.42 81%   RICM5 Rickettsia massiliae (strain Mtu5) 969 0.32 95%   RICPR Rickettsia prowazekii (strain Madrid E) 832 0.28 95%   RICPU Rickettsia peacockii (strain Rustic) 927 0.29 98%   RICRO Rickettsia rickettsii (strain Iowa) 1384 0.32 85%   RICRS Rickettsia rickettsii (strain Sheila Smith) 1345 0.32 87%   RICTY Rickettsia typhi (strain ATCC VR-144 / Wilmington) 837 0.28 96%   RIEAR Riemerella anatipestifer (strain RA-GD) 1977 0.62 82%   ROSCS Roseiflexus castenholzii (strain DSM 13941 / HLO8) 4324 1.56 92%   ROSDO Roseobacter denitrificans (strain ATCC 33942 / OCh 114) 3939 1.24 87%   ROSS1 Roseiflexus sp. (strain RS-1) 4494 1.63 91%   ROTDC Rothia dentocariosa (strain ATCC 17931 / CDC X599 / XDIA) 2208 0.71 76%   ROTMD Rothia mucilaginosa (strain DY-18) 1991 0.76 73%   RUBXD Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) 3121 0.98 79%   RUTMC Ruthia magnifica subsp. Calyptogena magnifica 976 0.31 95%   SACD2 Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) 3993 1.45 83%   SACEN Saccharopolyspora erythraea (strain NRRL 23338) 7146 2.31 82%   SACVD Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) 3828 1.24 87%   SALA4 Salmonella agona (strain SL483) 4593 1.37 92%   SALAI Salinispora arenicola (strain CNS-205) 4847 1.64 90%   SALAR Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) 4499 1.33 87%   SALCH Salmonella choleraesuis (strain SC-B67) 4581 1.36 96%   SALDC Salmonella dublin (strain CT_02021853) 4607 1.35 92%   SALEP Salmonella enteritidis PT4 (strain P125109) 4303 1.35 98%   SALG2 Salmonella gallinarum (strain 287/91 / NCTC 13346) 4258 1.35 98%   SALHS Salmonella heidelberg (strain SL476) 4757 1.40 92%   SALNS Salmonella newport (strain SL254) 4787 1.42 92%   SALPA Salmonella paratyphi A (strain ATCC 9150 / SARB42) 4076 1.25 98%   SALPB Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) 5559 1.44 80%   SALPC Salmonella paratyphi C (strain RKS4594) 4600 1.35 95%   SALPK Salmonella paratyphi A (strain AKU_12601) 4490 1.38 97%   SALRD Salinibacter ruber (strain DSM 13855 / M31) 2811 1.01 71%   SALSV Salmonella schwarzengrund (strain CVM19633) 4603 1.36 92%   SALTI Salmonella typhi 4911 1.48 94%   SALTO Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) 4522 1.52 91%   SALTS Salmonella typhimurium (strain SL1344) 4497 1.41 98%   SALTY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) 4529 1.42 98%   SANKS Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) 3710 1.27 86%   SARHA Sarcophilus harrisii (Tasmanian devil) 19337 9.87 84%   SCHMA Schistosoma mansoni 11404 5.25   35% SCHPO Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) 4958 2.34 67%   SEBTE Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) 4056 1.26 68%   SEGRD Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578) 3000 0.95 72%   SERP5 Serratia proteamaculans (strain 568) 4929 1.59 95%   SERSA Serratia plymuthica (strain AS9) 4950 1.57 95%   SHEAM Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) 3638 1.26 95%   SHEB2 Shewanella baltica (strain OS223) 4383 1.46 95%   SHEB5 Shewanella baltica (strain OS155 / ATCC BAA-1091) 4218 1.39 96%   SHEB8 Shewanella baltica (strain OS185) 4365 1.47 98%   SHEB9 Shewanella baltica (strain OS195) 4616 1.53 97%   SHEDO Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) 3726 1.27 91%   SHEFN Shewanella frigidimarina (strain NCIMB 400) 3989 1.35 96%   SHEHH Shewanella halifaxensis (strain HAW-EB4) 4275 1.45 97%   SHELP Shewanella loihica (strain ATCC BAA-1088 / PV-4) 3854 1.31 96%   SHEON Shewanella oneidensis (strain MR-1) 4584 1.37 85%   SHEPA Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) 4179 1.42 97%   SHEPC Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) 3948 1.32 98%   SHEPW Shewanella piezotolerans (strain WP3 / JCM 13877) 4895 1.51 84%   SHESA Shewanella sp. (strain ANA-3) 4341 1.49 96%   SHESH Shewanella sediminis (strain HAW-EB3) 4493 1.52 94%   SHESM Shewanella sp. (strain MR-4) 3918 1.34 99%   SHESR Shewanella sp. (strain MR-7) 4003 1.36 98%   SHESW Shewanella sp. (strain W3-18-1) 4007 1.32 98%   SHEVD Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) 4333 1.35 84%   SHEWM Shewanella woodyi (strain ATCC 51908 / MS32) 4865 1.68 92%   SHIB3 Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) 4121 1.15 91%   SHIBS Shigella boydii serotype 4 (strain Sb227) 3826 1.15 97%   SHIDS Shigella dysenteriae serotype 1 (strain Sd197) 3792 1.07 90%   SHIF8 Shigella flexneri serotype 5b (strain 8401) 3849 1.18 98%   SHIFL Shigella flexneri 4225 1.33 94%   SHISS Shigella sonnei (strain Ss046) 3968 1.24 98%   SILPO Silicibacter pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) 4231 1.37 91%   SILST Silicibacter sp. (strain TM1040) 3845 1.22 89%   SINMW Sinorhizobium medicae (strain WSM419) 6145 1.92 92%   SLAHD Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) 2750 0.90 69%   SODGM Sodalis glossinidius (strain morsitans) 2480 0.71 84%   SOLUE Solibacter usitatus (strain Ellin6076) 7758 2.98 67%   SORAR Sorex araneus (Eurasian common shrew) 13096 5.86 88%   SORBI Sorghum bicolor (Sorghum) 35447 12.81 67%   SORC5 Sorangium cellulosum (strain So ce56) 9336 3.75 56%   SPETR Spermophilus tridecemlineatus (Squirrel) 19039 9.66 92%   SPHAL Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) 3181 1.01 87%   SPHS2 Sphingobacterium sp. (strain 21) 5132 1.81 83%   SPHTD Sphaerobacter thermophilus (strain DSM 20745 / S 6022) 3471 1.14 81%   SPHWW Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) 5311 1.78 82%   SPILD Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) 6866 2.43 75%   SPISS Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) 4210 1.43 77%   SPITD Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) 2198 0.77 80%   STAA0 Staphylococcus aureus (strain TW20 / 0582) 2819 0.84 97%   STAA1 Staphylococcus aureus (strain Mu3 / ATCC 700698) 2677 0.80 98%   STAA2 Staphylococcus aureus (strain JH1) 2755 0.81 97%   STAA3 Staphylococcus aureus (strain USA300) 2599 0.79 98%   STAA8 Staphylococcus aureus (strain NCTC 8325) 2887 0.80 91%   STAA9 Staphylococcus aureus (strain JH9) 2702 0.81 98%   STAAB Staphylococcus aureus (strain bovine RF122 / ET3-1) 2576 0.76 96%   STAAC Staphylococcus aureus (strain COL) 2674 0.77 93%   STAAD Staphylococcus aureus (strain ED98) 2682 0.79 94%   STAAE Staphylococcus aureus (strain Newman) 2570 0.79 98%   STAAF Staphylococcus aureus subsp. aureus (strain ED133) 2620 0.76 95%   STAAH Staphylococcus aureus (strain TCH60) 2690 0.79 95%   STAAJ Staphylococcus aureus (strain JKD6159) 2577 0.78 98%   STAAK Staphylococcus aureus (strain JKD6008) 2652 0.78 96%   STAAM Staphylococcus aureus (strain Mu50 / ATCC 700699) 2715 0.80 98%   STAAN Staphylococcus aureus (strain N315) 2591 0.78 98%   STAAR Staphylococcus aureus (strain MRSA252) 2717 0.80 96%   STAAS Staphylococcus aureus (strain MSSA476) 2642 0.79 97%   STAAT Staphylococcus aureus (strain USA300 / TCH1516) 2682 0.77 93%   STAAW Staphylococcus aureus (strain MW2) 2657 0.79 97%   STACT Staphylococcus carnosus (strain TM300) 2460 0.73 89%   STAEQ Staphylococcus epidermidis (strain ATCC 35984 / RP62A) 2490 0.72 90%   STAES Staphylococcus epidermidis (strain ATCC 12228) 2439 0.70 88%   STAHD Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) 1599 0.46 91%   STAHJ Staphylococcus haemolyticus (strain JCSC1435) 2604 0.75 88%   STALH Staphylococcus lugdunensis (strain HKU09-01) 2456 0.74 91%   STAMF Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) 1570 0.45 94%   STANL Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) 6379 2.07 77%   STAS1 Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) 2507 0.71 89%   STRA1 Streptococcus agalactiae serotype Ia (strain ATCC 27591 / A909 / CDC SS700) 1978 0.61 96%   STRA3 Streptococcus agalactiae serotype III (strain NEM316) 2030 0.62 94%   STRA5 Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R) 2102 0.62 93%   STRAW Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) 7665 2.61 88%   STRBB Streptomyces bingchenggensis (strain BCW-1) 10017 3.43 81%   STRCO Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) 8086 2.64 87%   STRDG Streptococcus dysgalactiae subsp. equisimilis (strain GGS_124) 2086 0.61 92%   STRE4 Streptococcus equi subsp. equi (strain 4047) 2043 0.62 94%   STRE5 Streptococcus salivarius (strain 57.I) 1931 0.61 92%   STRE8 Streptococcus salivarius (strain JIM8777) 1977 0.64 94%   STREJ Streptococcus suis (strain JS14) 2053 0.61 95%   STREM Streptococcus equi subsp. zooepidemicus (strain MGCS10565) 1861 0.55 90%   STRG3 Streptococcus gallolyticus (strain UCN34) 2249 0.68 89%   STRGC Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) 2050 0.64 90%   STRGG Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) 7010 2.47 89%   STRM5 Stenotrophomonas maltophilia (strain R551-3) 4026 1.36 95%   STRM6 Streptococcus mitis (strain B6) 1980 0.61 90%   STRM9 Streptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC 10651 / 9901) 1423 0.48 73%   STRMK Stenotrophomonas maltophilia (strain K279a) 4400 1.44 92%   STRMN Streptococcus mutans serotype c (strain NN2025) 1893 0.57 94%   STRMU Streptococcus mutans serotype c (strain ATCC 700610 / UA159) 1952 0.58 92%   STRP0 Streptococcus pneumoniae serotype A19 (strain TCH8431) 2257 0.60 91%   STRP1 Streptococcus pyogenes serotype M1 1692 0.51 98%   STRP2 Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) 1915 0.57 97%   STRP3 Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315) 1858 0.54 97%   STRP4 Streptococcus pneumoniae serotype 19F (strain G54) 2099 0.59 92%   STRP6 Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394) 1874 0.55 95%   STRP7 Streptococcus pneumoniae (strain 70585) 2174 0.61 93%   STRP8 Streptococcus pyogenes serotype M18 (strain MGAS8232) 1833 0.53 96%   STRPB Streptococcus pyogenes serotype M12 (strain MGAS2096) 1884 0.54 91%   STRPC Streptococcus pyogenes serotype M12 (strain MGAS9429) 1866 0.53 94%   STRPD Streptococcus pyogenes serotype M2 (strain MGAS10270) 1962 0.56 94%   STRPF Streptococcus pyogenes serotype M4 (strain MGAS10750) 1963 0.56 94%   STRPG Streptococcus pyogenes serotype M5 (strain Manfredo) 1809 0.53 97%   STRPI Streptococcus pneumoniae (strain Hungary19A-6) 2151 0.62 94%   STRPJ Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) 2125 0.64 97%   STRPM Streptococcus pyogenes serotype M28 (strain MGAS6180) 1886 0.55 96%   STRPN Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) 2107 0.60 91%   STRPS Streptococcus pneumoniae (strain CGSP14) 2189 0.63 93%   STRPU Strongylocentrotus purpuratus (Purple sea urchin) 26882 13.31   48% STRPZ Streptococcus pyogenes serotype M49 (strain NZ131) 1702 0.51 96%   STRR6 Streptococcus pneumoniae (strain ATCC BAA-255 / R6) 2030 0.59 97%   STRRD Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) 8926 2.94 82%   STRS2 Streptococcus suis (strain 98HAH33) 2178 0.61 87%   STRS4 Streptococcus suis (strain BM407) 2026 0.63 97%   STRS7 Streptococcus equi subsp. zooepidemicus (strain H70) 1940 0.60 94%   STRSE Streptococcus suis (strain P1/7) 1895 0.59 98%   STRSV Streptococcus sanguinis (strain SK36) 2267 0.70 89%   STRSW Streptomyces scabies (strain 87.22) 8758 2.92 84%   STRSX Streptococcus suis (strain SC84) 1970 0.61 98%   STRSY Streptococcus suis (strain 05ZYH33) 2178 0.61 87%   STRT1 Streptococcus thermophilus (strain CNRZ 1066) 1897 0.50 94%   STRT2 Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) 1866 0.50 94%   STRTD Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) 1704 0.47 89%   STRU0 Streptococcus uberis (strain ATCC BAA-854 / 0140J) 1822 0.55 91%   STRZI Streptococcus pneumoniae serotype 1 (strain INV104) 1920 0.59 97%   STRZJ Streptococcus pneumoniae (strain JJA) 2116 0.59 93%   STRZO Streptococcus pneumoniae serotype 3 (strain OXC141) 1970 0.58 97%   STRZP Streptococcus pneumoniae (strain P1031) 2066 0.58 94%   STRZT Streptococcus pneumoniae (strain Taiwan19F-14) 2034 0.58 94%   SULAA Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) 1707 0.51 92%   SULAC Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) 2215 0.63 90%   SULAO Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) 2155 0.67 89%   SULD5 Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175) 2243 0.70 87%   SULDN Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) 2082 0.67 90%   SULIA Sulfolobus islandicus (strain M.16.27) 2650 0.76 98%   SULID Sulfolobus islandicus (strain L.D.8.5 / Lassen #2) 2908 0.77 92%   SULIH Sulfolobus islandicus (strain HVE10/4) 2716 0.76 96%   SULIK Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) 2729 0.75 95%   SULIL Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) 2724 0.76 97%   SULIM Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) 2596 0.74 98%   SULIN Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) 2850 0.77 93%   SULIY Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) 2877 0.77 94%   SULMD Sulcia muelleri (strain DMIN) 226 0.08 97%   SULMS Sulcia muelleri (strain SMDSEM) 242 0.08 94%   SULMW Sulcia muelleri (strain GWSS) 227 0.08 96%   SULNB Sulfurovum sp. (strain NBC37-1) 2460 0.77 82%   SULS9 Sulfolobus solfataricus (strain 98/2) 2617 0.71 95%   SULSO Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) 2928 0.83 91%   SULSY Sulfurihydrogenibium sp. (strain YO3AOP1) 1712 0.52 94%   SULTO Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) 2812 0.76 84%   SYMTH Symbiobacterium thermophilum (strain T / IAM 14863) 3312 1.02 72%   SYNAS Syntrophus aciditrophicus (strain SB) 3138 0.93 71%   SYNFM Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) 4010 1.35 78%   SYNJA Synechococcus sp. (strain JA-3-3Ab) 2712 0.82 89%   SYNJB Synechococcus sp. (strain JA-2-3B'a(2-13)) 2821 0.86 88%   SYNLT Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) 2311 0.69 84%   SYNP2 Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) 3179 0.99 86%   SYNP6 Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) 2521 0.78 87%   SYNPW Synechococcus sp. (strain WH7803) 2530 0.73 89%   SYNPX Synechococcus sp. (strain WH8102) 2523 0.73 87%   SYNR3 Synechococcus sp. (strain RCC307) 2532 0.70 80%   SYNS3 Synechococcus sp. (strain CC9311) 2881 0.75 78%   SYNS9 Synechococcus sp. (strain CC9902) 2301 0.66 93%   SYNSC Synechococcus sp. (strain CC9605) 2631 0.72 84%   SYNWW Syntrophomonas wolfei subsp. wolfei (strain Goettingen) 2471 0.79 84%   SYNY3 Synechocystis sp. (strain PCC 6803 / Kazusa) 3499 1.12 86%   TAEGU Taeniopygia guttata (Zebra finch) 17104 7.84 87%   TAKRU Takifugu rubripes (Japanese pufferfish) 22942 12.89 77%   TARSY Tarsius syrichta (Philippine tarsier) 13555 6.43 91%   TAYEM Taylorella equigenitalis (strain MCE9) 1556 0.52 81%   TERTT Teredinibacter turnerae (strain ATCC 39867 / T7901) 4249 1.49 79%   TETNG Tetraodon nigroviridis (Spotted green pufferfish) 20020 10.12 89%   THASP Thauera sp. (strain MZ1T) 3927 1.34 92%   THEAB Thermosipho africanus (strain TCF52B) 1918 0.60 91%   THEAC Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) 1481 0.45 90%   THEAH Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12) 1592 0.48 93%   THEAM Thermosphaera aggregans (strain DSM 11486 / M11TL) 1387 0.40 88%   THEAS Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) 1737 0.57 85%   THECD Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) 4888 1.57 83%   THEEB Thermosynechococcus elongatus (strain BP-1) 2447 0.77 87%   THEFY Thermobifida fusca (strain YX) 3108 1.03 88%   THEGJ Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) 2157 0.64 89%   THEIA Thermoanaerobacter italicus (strain DSM 9252 / Ab9) 2239 0.69 96%   THELT Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) 2040 0.67 88%   THEM3 Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) 2158 0.66 96%   THEM4 Thermosipho melanesiensis (strain BI429 / DSM 12029) 1877 0.58 91%   THEM7 Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) 2324 0.80 76%   THEMA Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) 1852 0.58 95%   THENR Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10) 1765 0.56 99%   THENV Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) 1965 0.53 95%   THEON Thermococcus onnurineus (strain NA1) 1976 0.56 92%   THEP1 Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) 1783 0.57 98%   THEP3 Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) 2192 0.66 96%   THEPD Thermofilum pendens (strain Hrk 5) 1876 0.54 70%   THEPX Thermoanaerobacter sp. (strain X514) 2322 0.70 98%   THERP Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) 2858 0.87 75%   THES4 Thermococcus sp. (strain CGMCC 1.5172 / 4557) 2133 0.61 91%   THESM Thermococcus sibiricus (strain MM 739 / DSM 12597) 2036 0.55 87%   THESO Thermodesulfobacterium sp. (strain OPB45) 1593 0.51 83%   THESQ Thermotoga sp. (strain RQ2) 1818 0.59 99%   THESX Thermoanaerobacter sp. (strain X513) 2307 0.70 98%   THET1 Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) 2827 0.94 77%   THET2 Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) 2201 0.67 94%   THET8 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 2227 0.66 92%   THETN Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) 2547 0.76 87%   THEVO Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) 1522 0.45 88%   THEYD Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) 1982 0.61 84%   THICR Thiomicrospira crunogena (strain XCL-2) 2183 0.72 86%   THIDA Thiobacillus denitrificans (strain ATCC 25259) 2826 0.89 88%   THIS3 Thiomonas sp. (strain 3As) 3620 1.13 82%   THISH Thioalkalivibrio sp. (strain HL-EbGR7) 3272 1.00 88%   TOXGO Toxoplasma gondii 7980 5.94   28% TREDE Treponema denticola (strain ATCC 35405 / CIP 103919 / DSM 14222) 2753 0.86 68%   TREPA Treponema pallidum (strain Nichols) 1027 0.35 96%   TREPC Treponema pallidum subsp. pallidum (strain Chicago) 981 0.33 89%   TREPS Treponema pallidum subsp. pallidum (strain SS14) 1028 0.35 96%   TRIAD Trichoplax adhaerens 11466 5.21 66%   TRICA Tribolium castaneum (Red flour beetle) 14798 6.70 58%   TRIEI Trichodesmium erythraeum (strain IMS101) 4327 1.52 75%   TRISP Trichinella spiralis (Trichina worm) 15661 5.11   25% TROW8 Tropheryma whipplei (strain TW08/27) (Whipple's bacillus) 780 0.26 95%   TROWT Tropheryma whipplei (strain Twist) 805 0.26 92%   TRYB2 Trypanosoma brucei brucei (strain 927/4 GUTat10.1) 6785 3.38 53%   TUPBE Tupaia belangeri (Common tree shrew) 15373 6.81 90%   TURTR Tursiops truncatus (Atlantic bottle-nosed dolphin) 16496 8.99 98%   UNCMA Uncultured methanogenic archaeon RC-I 3069 0.89 81%   UNCTG Uncultured termite group 1 bacterium phylotype Rs-D17 767 0.25 85%   UREP2 Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) 609 0.23 99%   UREPA Ureaplasma parvum serovar 3 (strain ATCC 700970) 611 0.23 97%   UREU1 Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) 646 0.26 89%   USTMA Ustilago maydis (strain 521 / FGSC 9021) 6510 3.99 51%   VARPE Variovorax paradoxus (strain EPS) 5936 1.99 92%   VARPS Variovorax paradoxus (strain S110) 6272 2.05 92%   VEREI Verminephrobacter eiseniae (strain EF01-2) 4909 1.65 83%   VESOH Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) 938 0.29 96%   VIBC3 Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) 3772 1.19 93%   VIBCH Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) 3782 1.15 92%   VIBCJ Vibrio cholerae serotype O1 (strain MJ-1236) 3693 1.19 95%   VIBCM Vibrio cholerae serotype O1 (strain M66-2) 3652 1.15 93%   VIBF1 Vibrio fischeri (strain ATCC 700601 / ES114) 3789 1.23 94%   VIBFM Vibrio fischeri (strain MJ11) 4034 1.30 91%   VIBHB Vibrio harveyi (strain ATCC BAA-1116 / BB120) 5568 1.61 80%   VIBPA Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) 4820 1.49 88%   VIBSL Vibrio splendidus (strain LGP32) 4420 1.42 88%   VIBVU Vibrio vulnificus (strain CMCP6) 4470 1.44 93%   VIBVY Vibrio vulnificus (strain YJ016) 4987 1.55 86%   VITVI Vitis vinifera (Grape) 26207 9.55 62%   VULDI Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) 2492 0.71 89%   VULM7 Vulcanisaeta moutnovskia (strain 768-28) 2318 0.67 91%   WEIKK Weissella koreensis (strain KACC 15510) 1346 0.40 81%   WIGBR Wigglesworthia glossinidia brevipalpis 612 0.20 94%   WOLPM Wolbachia pipientis wMel 1159 0.33 82%   WOLPP Wolbachia pipientis subsp. Culex pipiens (strain wPip) 1238 0.40 79%   WOLSU Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) 2027 0.65 87%   WOLTR Wolbachia sp. subsp. Brugia malayi (strain TRS) 804 0.24 82%   WOLWR Wolbachia sp. subsp. Drosophila simulans (strain wRi) 1033 0.33 94%   XANAC Xanthomonas axonopodis pv. citri (strain 306) 4352 1.50 92%   XANC5 Xanthomonas campestris pv. vesicatoria (strain 85-10) 4621 1.55 89%   XANC8 Xanthomonas campestris pv. campestris (strain 8004) 4213 1.44 98%   XANCB Xanthomonas campestris pv. campestris (strain B100) 4452 1.47 91%   XANCP Xanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568) 4123 1.42 98%   XANOM Xanthomonas oryzae pv. oryzae (strain MAFF 311018) 4036 1.30 95%   XANOP Xanthomonas oryzae pv. oryzae (strain PXO99A) 4559 1.32 83%   XANOR Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) 4152 1.37 88%   XANP2 Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) 4969 1.62 89%   XENTR Xenopus tropicalis (Western clawed frog) 19278 10.39 82%   XYLCX Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) 3335 1.13 84%   XYLF2 Xylella fastidiosa (strain M23) 2157 0.67 96%   XYLFA Xylella fastidiosa (strain 9a5c) 2775 0.74 78%   XYLFG Xylella fastidiosa (strain GB514) 2181 0.62 89%   XYLFM Xylella fastidiosa (strain M12) 2053 0.63 93%   XYLFT Xylella fastidiosa (strain Temecula1 / ATCC 700964) 2003 0.65 99%   YARLI Yarrowia lipolytica (strain CLIB 122 / E 150) 6603 3.14 62%   YEAST Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 6352 2.95 76%   YERE3 Yersinia enterocolitica subsp. palearctica serotype O:9 / biotype 3 (strain 105.5R(r)) 3981 1.25 94%   YERE8 Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) 4106 1.31 95%   YERP1 Yersinia pestis (strain D182038) 3488 1.20 98%   YERP3 Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) 4303 1.36 91%   YERPA Yersinia pestis bv. Antiqua (strain Antiqua) 4129 1.30 97%   YERPB Yersinia pseudotuberculosis serotype IB (strain PB1/+) 4213 1.32 95%   YERPD Yersinia pestis (strain D106004) 3493 1.21 98%   YERPE Yersinia pestis 4006 1.28 97%   YERPG Yersinia pestis bv. Antiqua (strain Angola) 3817 1.14 91%   YERPN Yersinia pestis bv. Antiqua (strain Nepal516) 3937 1.25 98%   YERPP Yersinia pestis (strain Pestoides F) 3937 1.26 98%   YERPS Yersinia pseudotuberculosis serotype I (strain IP32953) 4093 1.34 98%   YERPY Yersinia pseudotuberculosis serotype O:3 (strain YPIII) 4169 1.30 94%   YERPZ Yersinia pestis (strain Z176003) 3544 1.23 100%   ZUNPS Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) 4631 1.48 78%   ZYMMO Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) 2029 0.60 73%   Last update: Wed Jun 19 15:00:10 2013 Last change: lastchg Program to produce page by Adrian Altenhoff