Status of the OMA Orthologs Project

This page displays the current status of the orthologs project that is currently under way in the Computational Biochemistry Research Group (CBRG) of the ETH Zürich and is automatically updated every hour. There are several other webpages related to the OMA project:
  • The project homepage
  • A webpage describing algorithm.
  • A webpage with timing statistics of the over 300 CPUs used.
  • A page with facts and figures about the over 3 billion alignments collected so far.
  • All trees are downloadable in the Newick tree format and you can explore the trees using the ATV tree viewer applet.
  • The OMA groups can be explored with the OMA Browser which can be found under omabrowser.org.


    • The latest matrices contain 970 species: (go to list)

    907 Species
    Oct 21
    446900 orthologous groups
    7.6 proteins per group
    69 Archaea
    Jan 30
    19681 orthologous groups
    6.4 proteins per group     		751 Bacteria
    Oct 19
    237857 orthologous groups
    9.2 proteins per group     		99 Eukaryota
    Jan 24
    202721 orthologous groups
    5.8 proteins per group
    206 Gammaproteobacteria
    Jan 14
    53534 orthologous groups
    12.8 proteins per group     		213 other Proteobacteria
    Jan 15
    83162 orthologous groups
    8.3 proteins per group     		67 Metazoa
    Mar 02
    145537 orthologous groups
    6.6 proteins per group
    155 Firmicutes
    Jan 08
    40396 orthologous groups
    9.6 proteins per group     		34 Cyanobacteria
    Dec 04
    13324 orthologous groups
    6.7 proteins per group     		36 Mammalia
    Dec 15
    61247 orthologous groups
    9.1 proteins per group
    69 Actinobacteria
    Feb 25
    37025 orthologous groups
    6.5 proteins per group     		123 other Bacteria
    Feb 25
    36062 orthologous groups
    5.7 proteins per group     		34 other Eukaryota
    Dec 04
    58671 orthologous groups
    3.7 proteins per group

    Currently in the all-against-all

    NEUCR - Neurospora crassa (79% completed)
    [Fungi - Dikarya]

    Recently added to the matrices

    Feb 24: CHLTJ - Chlamydia trachomatis (strain B/Jali20/OT) [Chlamydiae - Chlamydiales]
    Feb 23: XYLCX - Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) [Actinobacteria - Actinobacteridae]
    Feb 23: CRYCD - Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) [Actinobacteria - Coriobacteridae]

    Finished all-all, but missing in matrices

    82 Species
    69 Bacteria
    4 Gammaproteobacteria: DICZE, ECO5T, EDWI9, PECCP
    3 Firmicutes: ALIAD, BACC0, STRZT
    2 Actinobacteria: BIFA0, SANKS
    1 Eukaryota: DROWI
    1 other Bacteria: BLASB
    9 other Proteobacteria

    The Latest Trees

    Species trees can be constructed by several methods. We found that best trees according to biological classifications are the PAM distance trees, where the distances are determined by the average PAM distance between every pair of species. The optimal set of OMA groups from which the distance averages are calculated is based on the "dimensionless fitting index". This is a normalized measure of how well a set of distance estimates can be fit on a tree.

    Tree of Archaea

    Tree info: All Archaeal genomes (max Length) (only 1 isoform used) , Sat Jan 30 14:33:04 2010, 69 species, 19681 orthologs, 18 top groups, 199 used here, Weighted, BestSubset
    DimlessQual: best: 1.6454, ave: 1.752 +- 0.012, var: 0.04041, Z=-0.5293
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Archaea
    Color code:
    Crenarchaeota
    Methanomicrobia
    Methanococci
    Halobacteria
    Thermococci
    Methanobacteria
    Thermoplasmata
    Archaeoglobi
    Methanopyri
    environmental samples
    Korarchaeota
    Nanoarchaeota


    Recently added:
    Jan 25: METVM - Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7)
    Dec 20: THESM - Thermococcus sibiricus (strain MM 739 / DSM 12597)
    Dec 17: SULIK - Sulfolobus islandicus (strain M.16.4 / Kamchatka #3)

    Tree of Bacteria

    Tree info: All Bacterial genomes, Wed Jun 27 01:46:01 2007, 340 species, 114863 orthologs, 943 used here, Arithmetic, BestDimless
    DimlessQual: best: 4.3995, ave: 4.997 +- 0.011, var: 0.03114, Z=-3.386
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Bacteria
    Color code:
    Proteobacteria
    Firmicutes
    Actinobacteria
    Cyanobacteria
    Spirochaetes
    Bacteroidetes
    Chlamydiae
    Chlorobi
    Deinococcus-Thermus
    Acidobacteria
    Chloroflexi
    Aquificae
    Fusobacteria
    Planctomycetes
    Thermotogales
    Eukaryota


    Recently added:
    Jun 18: YERPN - Yersinia pestis (biovar Antiqua strain Nepal516)
    Jun 17: VEREI - Verminephrobacter eiseniae (strain EF01-2)
    Jun 3: DESDG - Desulfovibrio desulfuricans (strain G20)

    Tree of Gammaproteobacteria

    Tree info: All Gammaproteobacteria (max Length) (only 1 isoform used) , Thu Jan 14 11:45:25 2010, 206 species, 53534 orthologs, 47 top groups, 262 used here, Arithmetic, BestSubset
    DimlessQual: best: 0.19728, ave: 0.21386 +- 0.00077, var: 0.0001547, Z=-1.334
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Gammaproteobacteria
    Color code:
    Enterobacteriales
    Alteromonadales
    Pseudomonadales
    Pasteurellales
    Xanthomonadales
    Vibrionales
    Thiotrichales
    Legionellales
    Chromatiales
    Oceanospirillales
    Acidithiobacillales
    Aeromonadales
    sulfur-oxidizing symbionts
    Baumannia
    Cardiobacteriales
    Methylococcales


    Recently added:
    Jan 8: HAMD5 - Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT)
    Jan 5: PHOAA - Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)
    Dec 18: ECOBB - Escherichia coli (strain B / BL21)

    Tree of other Proteobacteria

    Tree info: Other Proteobacteria (max Length) (only 1 isoform used) , Fri Jan 15 21:23:29 2010, 213 species, 83162 orthologs, 136 top groups, 674 used here, Arithmetic, BestDimless
    DimlessQual: best: 1.0858, ave: 1.2386 +- 0.0031, var: 0.00253, Z=-3.038
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of other Proteobacteria
    Color code:
    Burkholderiales
    Rhizobiales
    Rickettsiales
    Epsilonproteobacteria
    Deltaproteobacteria
    Rhodobacteraceae
    Neisseriales
    Rhodospirillales
    Sphingomonadales
    Caulobacterales
    Hyphomonadaceae
    Nitrosomonadales
    Rhodocyclales
    Methylophilales
    Hydrogenophilales
    Magnetococcus


    Recently added:
    Jan 8: ACEP3 - Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153)
    Jan 5: HELP2 - Helicobacter pylori (strain P12)
    Dec 29: RICPU - Rickettsia peacockii (strain Rustic)

    Tree of Firmicutes

    Tree info: All Firmicutes (max Length) (only 1 isoform used) , Fri Jan 8 08:21:57 2010, 155 species, 40396 orthologs, 45 top groups, 200 used here, Weighted, BestSubset
    DimlessQual: best: 0.27701, ave: 0.31284 +- 0.00091, var: 0.0002179, Z=-2.427
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Firmicutes
    Color code:
    Streptococcus
    Clostridiales
    Bacillaceae
    Staphylococcaceae
    Lactobacillaceae
    Listeriaceae
    Thermoanaerobacterales
    Lactococcus
    Bacillales Family XII. Incertae Sedis
    Paenibacillaceae
    Leuconostoc
    Halanaerobiales
    Natranaerobiales
    Macrococcus
    Enterococcaceae
    Oenococcus


    Recently added:
    Jan 7: PAESJ - Paenibacillus sp. (strain JDR-2)
    Dec 29: DESHD - Desulfitobacterium hafniense (strain DCB-2 / DSM 10664)
    Dec 24: LACPJ - Lactobacillus plantarum (strain JDM1)

    Tree of Cyanobacteria

    Tree info: All Cyanobacteria (max Length) (only 1 isoform used) , Fri Dec 4 11:42:08 2009, 34 species, 13324 orthologs, 1 top groups, 223 used here, Weighted, BestSubset
    DimlessQual: best: 1.9656, ave: 2.1143 +- 0.0090, var: 0.021, Z=-1.026
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Cyanobacteria
    Color code:
    Chroococcales
    Prochlorales
    Nostocales
    Acaryochloris
    Oscillatoriales


    Recently added:
    Dec 3: CYAP0 - Cyanothece sp. (strain PCC 8802)
    Jun 14: CYAP4 - Cyanothece sp. (strain PCC 7425 / ATCC 29141)
    May 21: THEEB - Thermosynechococcus elongatus (strain BP-1)

    Tree of Actinobacteria

    Tree info: All Actinobacteria (max Length) (only 1 isoform used) , Thu Feb 25 23:24:04 2010, 69 species, 37025 orthologs, 12 top groups, 188 used here, Weighted, BestSubset
    DimlessQual: best: 0.60068, ave: 0.6400 +- 0.0016, var: 0.0006466, Z=-1.548
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Actinobacteria
    Color code:
    Actinomycetales
    Bifidobacteriales
    Coriobacteridae
    Acidimicrobidae
    Rubrobacteridae
    Symbiobacterium


    Recently added:
    Feb 23: XYLCX - Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)
    Feb 23: CRYCD - Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3)
    Feb 23: STRSW - Streptomyces scabies (strain 87.22)

    Tree of other Bacteria

    Tree info: Other Bacteria (max Length) (only 1 isoform used) , Thu Feb 25 23:06:59 2010, 123 species, 36062 orthologs, 76 top groups, 181 used here, Weighted, BestSubset
    DimlessQual: best: 1.4217, ave: 1.911 +- 0.010, var: 0.02379, Z=-3.17
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of other Bacteria
    Color code:
    Tenericutes
    Bacteroidetes
    Spirochaetes
    Chlamydiae
    Chlorobi
    Chloroflexi
    Thermotogae
    Aquificae
    Deinococcus-Thermus
    Acidobacteria
    Verrucomicrobia
    Dictyoglomi
    candidate division TG1
    Fibrobacteres
    Fusobacteria
    Planctomycetes


    Recently added:
    Feb 24: CHLTJ - Chlamydia trachomatis (strain B/Jali20/OT)
    Feb 23: FIBSS - Fibrobacter succinogenes (strain ATCC 19169 / S85)
    Jan 23: PEDHD - Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)

    Tree of Eukaryota

    Tree info: All Eukaryotal genomes, Sun Jan 24 16:03:20 2010, 99 species, 202721 orthologs, 56 top groups, 1074 used here, Arithmetic, BestSubset
    DimlessQual: best: 0.04095, ave: 0.06258 +- 0.00018, var: 8.299e-06, Z=-7.509
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Eukaryota
    Color code:
    Sarcopterygii
    Fungi
    Protostomia
    Pseudocoelomata
    Viridiplantae
    Actinopterygii
    Euglenozoa
    Urochordata
    Alveolata
    Cephalochordata
    Cnidaria
    Placozoa
    Amoebozoa
    Choanoflagellida
    Fornicata


    Recently added:
    Jan 18: CAPI1 - Capitella sp. I
    Dec 14: CALJA - Callithrix jacchus (Marmoset)
    Dec 1: MONBE - Monosiga brevicollis

    Tree of Metazoa

    Tree info: All Metazoa (max Length) (only 1 isoform used) , Tue Mar 2 20:59:21 2010, 67 species, 145537 orthologs, 22 top groups, 1298 used here, Arithmetic, BestDimless
    DimlessQual: best: 0.079514, ave: 0.09377 +- 0.00034, var: 3.066e-05, Z=-2.574
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Metazoa
    Color code:
    Eutheria
    Protostomia
    Pseudocoelomata
    Actinopterygii
    Sauropsida
    Metatheria
    Urochordata
    Prototheria
    Amphibia
    Cephalochordata
    Cnidaria
    Placozoa


    Recently added:
    Feb 10: DROWI - Drosophila willistoni
    Jan 18: CAPI1 - Capitella sp. I
    Dec 14: CALJA - Callithrix jacchus (Marmoset)

    Tree of Mammalia

    Tree info: All Mammalia (max Length) (only 1 isoform used) , Tue Dec 15 14:53:22 2009, 36 species, 61247 orthologs, 4 top groups, 330 used here, Arithmetic, BestSubset
    DimlessQual: best: 0.42623, ave: 0.6226 +- 0.0030, var: 0.002405, Z=-4.005
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Mammalia
    Color code:
    Laurasiatheria
    Haplorrhini
    Glires
    Afrotheria
    Strepsirrhini
    Xenarthra
    Metatheria
    Scandentia
    Prototheria


    Recently added:
    Dec 14: Marmoset - Callithrix jacchus
    Nov 23: Pig - Sus scrofa
    Aug 12: Wallaby - Macropus eugenii

    Tree of other Eukaryota

    Tree info: Eukaryota excluding Metazoa (max Length) (only 1 isoform used) , Fri Dec 4 14:59:16 2009, 34 species, 58671 orthologs, 14 top groups, 309 used here, Arithmetic, BestSubset
    DimlessQual: best: 0.45587, ave: 0.7163 +- 0.0033, var: 0.002875, Z=-4.857
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of other Eukaryota
    Color code:
    Fungi
    Viridiplantae
    Euglenozoa
    Alveolata
    Amoebozoa
    Choanoflagellida
    Fornicata
    Metazoa


    Recently added:
    Dec 1: MONBE - Monosiga brevicollis
    Sep 2: GIALA - Giardia lamblia
    Aug 23: LACBI - Laccaria bicolor

    List of Species

    Click on a 5-letter code for more information about a particular species
    "Maa" stands for "million amino acids" and "Coverage" indicates the percentage of sequences which form part of some orthologous group.
    Scientific Name# Seqs Maa Coverage
    ACAM1Acaryochloris marina (strain MBIC 11017)81482.25
     49%
    ACEP3Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153)28850.94
    81% 
    ACHLIAcholeplasma laidlawii (strain PG-8A)13800.45
    62% 
    ACIACAcidovorax avenae subsp. citrulli (strain AAC00-1)46011.56
    84% 
    ACIADAcinetobacter sp. (strain ADP1)33071.05
    87% 
    ACIB3Acinetobacter baumannii (strain AB307-0294)34521.08
    95% 
    ACIB5Acinetobacter baumannii (strain AB0057)37321.14
    94% 
    ACIBCAcinetobacter baumannii (strain ACICU)37431.15
    92% 
    ACIBLAcidobacteria bacterium (strain Ellin345)47701.68
    67% 
    ACIBSAcinetobacter baumannii (strain SDF)32870.94
    80% 
    ACIBTAcinetobacter baumannii (strain ATCC 17978 / NCDC KC 755)33640.95
    84% 
    ACIBYAcinetobacter baumannii (strain AYE)37151.16
    95% 
    ACIC1Acidothermus cellulolyticus (strain ATCC 43068 / 11B)21570.73
    85% 
    ACIC5Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)33631.18
    71% 
    ACICJAcidiphilium cryptum (strain JF-5)35181.17
    82% 
    ACIF2Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455)31190.88
    80% 
    ACIF5Acidithiobacillus ferrooxidans (strain ATCC 53993)27450.83
    91% 
    ACIFDAcidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP)19350.63
    67% 
    ACISJAcidovorax sp. (strain JS42)40421.30
    94% 
    ACTMDActinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)69112.39
    75% 
    ACTP2Actinobacillus pleuropneumoniae serotype 5b (strain L20)20020.65
    98% 
    ACTP7Actinobacillus pleuropneumoniae serotype 7 (strain AP76)21090.67
    96% 
    ACTPJActinobacillus pleuropneumoniae serotype 3 (strain JL03)20240.64
    97% 
    ACTSZActinobacillus succinogenes (strain ATCC 55618 / 130Z)20770.68
    95% 
    AEDAEAedes aegypti (Yellow fever mosquito)151297.11
    68% 
    AERHHAeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240)41201.38
    94% 
    AERPEAeropyrum pernix16990.49
    69% 
    AERS4Aeromonas salmonicida (strain A449)43021.34
    91% 
    AGRRKAgrobacterium radiobacter (strain K84 / ATCC BAA-868)66752.11
    88% 
    AGRT5Agrobacterium tumefaciens (strain C58 / ATCC 33970)53471.66
    87% 
    AKKM8Akkermansia muciniphila (strain ATCC BAA-835)21370.77
    61% 
    ALCBSAlcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573)27520.91
    86% 
    ALHEHAlkalilimnicola ehrlichei (strain MLHE-1)28620.98
    85% 
    ALISLAliivibrio salmonicida (strain LFI1238)37961.22
    91% 
    ALKMQAlkaliphilus metalliredigens (strain QYMF)44631.32
    78% 
    ALKOOAlkaliphilus oremlandii (strain OhILAs)28280.87
    88% 
    ALTMDAlteromonas macleodii (strain DSM 17117 / Deep ecotype)40461.26
    76% 
    AMOA5Amoebophilus asiaticus (strain 5a2)12410.47
    55% 
    ANADEAnaeromyxobacter dehalogenans (strain 2CP-C)43441.52
    94% 
    ANADFAnaeromyxobacter sp. (strain Fw109-5)44611.58
    85% 
    ANAMMAnaplasma marginale (strain St. Maries)9400.34
    80% 
    ANAPDAnaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1)17950.59
    79% 
    ANAPZAnaplasma phagocytophilum (strain HZ)12340.33
    58% 
    ANASKAnaeromyxobacter sp. (strain K)44441.52
    93% 
    ANASPAnabaena sp. (strain PCC 7120)60691.96
    85% 
    ANATDAnaerocellum thermophilum (strain DSM 6725 / Z-1320)26480.83
    82% 
    ANAVTAnabaena variabilis (strain ATCC 29413 / PCC 7937)56241.91
    90% 
    ANOCAAnolis carolinensis (Anole lizard)176028.10
    88% 
    ANOGAAnopheles gambiae (African malaria mosquito)124995.95
    76% 
    APIMEApis mellifera (Honeybee)109353.31
    52% 
    AQUAEAquifex aeolicus15520.49
    80% 
    ARATHArabidopsis thaliana (Thale cress / Mouse-ear cress)2649611.02
    65% 
    ARCB4Arcobacter butzleri (strain RM4018)22540.72
    80% 
    ARCFUArchaeoglobus fulgidus24000.66
    66% 
    ARTATArthrobacter aurescens (strain TC1)45611.51
    86% 
    ARTCAArthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360)45861.47
    82% 
    ARTS2Arthrobacter sp. (strain FB24)44531.49
    89% 
    ASHGOAshbya gossypii (Yeast)47072.31
    87% 
    ASPFUAspergillus fumigatus98324.76
    67% 
    AYWBPAster yellows witches'-broom phytoplasma (strain AYWB)6810.18
    69% 
    AZOC5Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)47061.60
    90% 
    AZOPCAzobacteroides pseudotrichonymphae genomovar. CFP28470.29
    83% 
    AZOSBAzoarcus sp. (strain BH72)39801.33
    90% 
    AZOSEAzoarcus sp. (strain EbN1)44441.38
    76% 
    BACA2Bacillus amyloliquefaciens (strain FZB42)36911.15
    93% 
    BACAHBacillus thuringiensis (strain Al Hakam)47921.46
    97% 
    BACANBacillus anthracis56111.46
    89% 
    BACC1Bacillus cereus (strain ATCC 10987)55931.48
    87% 
    BACC2Bacillus cereus (strain G9842)58441.59
    86% 
    BACC4Bacillus cereus (strain B4264)53941.51
    93% 
    BACC7Bacillus cereus (strain AH187)57571.55
    89% 
    BACCNBacillus cereus subsp. cytotoxis (strain NVH 391-98)38391.08
    91% 
    BACCRBacillus cereus (strain ATCC 14579 / DSM 31)52371.45
    93% 
    BACCZBacillus cereus (strain ZK)51331.48
    97% 
    BACFNBacteroides fragilis (strain ATCC 25285 / NCTC 9343)43021.55
    89% 
    BACFRBacteroides fragilis46081.59
    84% 
    BACHDBacillus halodurans39961.16
    84% 
    BACHKBacillus thuringiensis (subsp. konkukian)50821.45
    97% 
    BACLDBacillus licheniformis (strain DSM 13 / ATCC 14580)41351.20
    90% 
    BACP2Bacillus pumilus (strain SAFR-032)36741.07
    89% 
    BACSKBacillus clausii (strain KSM-K16)41021.23
    86% 
    BACSUBacillus subtilis41041.22
    90% 
    BACTNBacteroides thetaiotaomicron47711.86
    75% 
    BACV8Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154)39801.49
    79% 
    BACWKBacillus weihenstephanensis (strain KBAB4)56501.59
    92% 
    BARBKBartonella bacilliformis (strain ATCC 35685 / KC583)12510.38
    84% 
    BARHEBartonella henselae15770.48
    86% 
    BARQUBartonella quintana13010.41
    86% 
    BART1Bartonella tribocorum (strain CIP 105476 / IBS 506)19520.60
    76% 
    BAUCHBaumannia cicadellinicola (subsp. Homalodisca coagulata)5950.19
    98% 
    BDEBABdellovibrio bacteriovorus35861.17
     48%
    BEII9Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)37741.21
    84% 
    BIFAABifidobacterium adolescentis (strain ATCC 15703 / DSM 20083)16270.60
    82% 
    BIFLBBifidobacterium animalis subsp. lactis (strain Bl-04 / DGCC2908 / RB 4825 / SD5219)15660.55
    80% 
    BIFLDBifidobacterium longum (strain DJO10A)19770.68
    83% 
    BIFLOBifidobacterium longum17230.64
    90% 
    BLOFLCandidatus Blochmannia floridanus5890.20
    96% 
    BLOPBBlochmannia pennsylvanicus (strain BPEN)6100.20
    98% 
    BORA1Bordetella avium (strain 197N)34061.12
    89% 
    BORAPBorrelia afzelii (strain PKo)12610.36
    84% 
    BORBRBordetella bronchiseptica49711.63
    96% 
    BORBUBorrelia burgdorferi (Lyme disease spirochete)15230.41
    79% 
    BORBZBorrelia burgdorferi (strain ZS7)12230.37
    94% 
    BORDLBorrelia duttonii (strain Ly)12850.42
    87% 
    BORGABorrelia garinii12680.36
    82% 
    BORHDBorrelia hermsii (strain DAH)8190.29
    99% 
    BORPABordetella parapertussis43651.45
    98% 
    BORPDBordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)49311.57
    90% 
    BORPEBordetella pertussis35501.17
    96% 
    BORRABorrelia recurrentis (strain A1)9770.33
    98% 
    BORT9Borrelia turicatae (strain 91E135)8180.29
    99% 
    BOTFBBotrytis cinerea162995.47
     40%
    BOVINBos taurus (Cow)2133810.63
    88% 
    BRAFDBrachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860)30621.07
    82% 
    BRAFLBranchiostoma floridae (Lancelet)2846413.24
     47%
    BRAHWBrachyspira hyodysenteriae (strain ATCC 49526 / WA1)26420.88
    54% 
    BRAJABradyrhizobium japonicum82512.62
    81% 
    BRASBBradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)75612.40
    90% 
    BRASOBradyrhizobium sp. (strain ORS278)67342.12
    90% 
    BREBNBrevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599)58871.81
    72% 
    BRUA1Brucella abortus (strain S19)29890.91
    96% 
    BRUA2Brucella abortus (strain 2308)33290.95
    92% 
    BRUABBrucella abortus30720.89
    95% 
    BRUC2Brucella canis (strain ATCC 23365 / NCTC 10854)32350.93
    95% 
    BRUMEBrucella melitensis31790.95
    93% 
    BRUO2Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)28190.85
    94% 
    BRUSIBrucella suis (strain ATCC 23445 / NCTC 10510)32130.92
    95% 
    BRUSUBrucella suis32460.93
    94% 
    BUCA5Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A)5550.18
    100% 
    BUCAIBuchnera aphidicola (subsp. Acyrthosiphon pisum)5730.19
    99% 
    BUCAPBuchnera aphidicola (subsp. Schizaphis graminum)5550.18
    99% 
    BUCATBuchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7)5530.18
    100% 
    BUCBPBuchnera aphidicola (subsp. Baizongia pistaciae)5070.17
    96% 
    BUCCCBuchnera aphidicola subsp. Cinara cedri3650.12
    90% 
    BURA4Burkholderia ambifaria (strain MC40-6)66892.19
    94% 
    BURCABurkholderia cenocepacia (strain AU 1054)64502.09
    99% 
    BURCCBurkholderia cenocepacia (strain MC0-3)69842.29
    97% 
    BURCHBurkholderia cenocepacia (strain HI2424)68972.23
    98% 
    BURCJBurkholderia cepacia (strain J2315 / LMG 16656)71202.31
    95% 
    BURCMBurkholderia cepacia (strain ATCC 53795 / AMMD)66072.18
    95% 
    BURM1Burkholderia multivorans (strain ATCC 17616 / 249)65852.11
    91% 
    BURM7Burkholderia mallei (strain NCTC 10247)56171.63
    91% 
    BURM9Burkholderia mallei (strain NCTC 10229)53081.60
    92% 
    BURMABurkholderia mallei47971.51
    90% 
    BURMSBurkholderia mallei (strain SAVP1)49751.47
    91% 
    BURP0Burkholderia pseudomallei (strain 1106a)71462.07
    85% 
    BURP1Burkholderia pseudomallei (strain 1710b)63102.45
    85% 
    BURP6Burkholderia pseudomallei (strain 668)72142.07
    84% 
    BURP8Burkholderia phymatum (strain DSM 17167 / STM815)74612.42
    87% 
    BURPPBurkholderia phytofirmans (strain DSM 17436 / PsJN)71972.32
    92% 
    BURPSBurkholderia pseudomallei58182.00
    96% 
    BURS3Burkholderia sp. (strain 383)77062.52
    92% 
    BURTABurkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)55251.92
    92% 
    BURVGBurkholderia vietnamiensis (strain G4 / LMG 22486)74012.32
    84% 
    BURXLBurkholderia xenovorans (strain LB400)85892.75
    85% 
    CAEBICaenorhabditis brenneri253859.69
    59% 
    CAEBRCaenorhabditis briggsae192367.96
    78% 
    CAEELCaenorhabditis elegans (Nematode)201848.44
    76% 
    CAEJACaenorhabditis japonica (Nematode)189717.37
    63% 
    CAERECaenorhabditis remanei3109612.57
    60% 
    CALJACallithrix jacchus (Marmoset)2434011.75
    79% 
    CALMQCaldivirga maquilingensis (strain DSMZ 13496 / IC-167)19620.60
    71% 
    CALS8Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903)26190.83
    88% 
    CAMC1Campylobacter concisus (strain 13826)20600.62
    80% 
    CAMC5Campylobacter curvus (strain 525.92)19280.57
    84% 
    CAMFFCampylobacter fetus subsp. fetus (strain 82-40)17150.53
    87% 
    CAMHCCampylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A)16870.48
    72% 
    CAMJ8Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828)16220.51
    96% 
    CAMJDCampylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97)17100.50
    87% 
    CAMJECampylobacter jejuni16420.52
    96% 
    CAMJJCampylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176)17470.53
    91% 
    CAMJRCampylobacter jejuni (strain RM1221)18320.54
    89% 
    CAMLRCampylobacter lari (strain RM2100 / D67 / ATCC BAA-1060)15450.49
    92% 
    CANALCandida albicans56952.74
    85% 
    CANFACanis familiaris (Dog)2020810.50
    90% 
    CANGACandida glabrata (Yeast)47522.42
    86% 
    CAPI1Capitella sp. I3156211.37
     44%
    CAPODCapnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845)21700.75
    74% 
    CARHZCarboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008)25980.72
    74% 
    CARRPCarsonella ruddii (strain PV)1820.05
     45%
    CAUCNCaulobacter crescentus (strain NA1000 / CB15N)38521.22
    95% 
    CAUCRCaulobacter crescentus37141.20
    95% 
    CAUSKCaulobacter sp. (strain K31)53711.71
    83% 
    CAVPOCavia porcellus (Guinea pig)1894010.00
    92% 
    CELJUCellvibrio japonicus (strain Ueda107)37121.37
    78% 
    CENSYCenarchaeum symbiosum20130.62
    58% 
    CHICKGallus gallus (Chicken)173938.41
    79% 
    CHLAAChloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)38501.41
    99% 
    CHLABChlamydophila abortus9600.34
    98% 
    CHLADChloroflexus aggregans (strain MD-66 / DSM 9485)37251.35
    92% 
    CHLCHChlorobium chlorochromatii (strain CaD3)19900.75
    87% 
    CHLCVChlamydophila caviae10040.35
    95% 
    CHLFFChlamydophila felis (strain Fe/C-56)10120.36
    95% 
    CHLL2Chlorobium limicola (strain DSM 245 / NBRC 103803)24190.79
    89% 
    CHLMUChlamydia muridarum9110.32
    93% 
    CHLP8Chlorobaculum parvum (strain NCIB 8327)20440.66
    93% 
    CHLPBChlorobium phaeobacteroides (strain BS1)24340.74
    85% 
    CHLPDChlorobium phaeobacteroides (strain DSM 266)25790.85
    86% 
    CHLPNChlamydia pneumoniae14790.50
    62% 
    CHLSYChloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl)41531.43
    92% 
    CHLT2Chlamydia trachomatis (strain L2/434/Bu / ATCC VR902B)8980.31
    99% 
    CHLT3Chloroherpeton thalassium (strain ATCC 35110 / GB-78)27080.95
    74% 
    CHLTAChlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B)9190.32
    97% 
    CHLTBChlamydia trachomatis (strain L2b/UCH-1/proctitis)8970.31
    99% 
    CHLTEChlorobium tepidum22510.63
    79% 
    CHLTJChlamydia trachomatis (strain B/Jali20/OT)9000.32
    99% 
    CHLTRChlamydia trachomatis8950.31
    99% 
    CHOHOCholoepus hoffmanni (Sloth)123295.43
    92% 
    CHRSDChromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768)32981.10
    86% 
    CHRVOChromobacterium violaceum43981.40
    77% 
    CIOINCiona intestinalis (Sea Squirt)155585.93
    56% 
    CIOSACiona savignyi (Pacific transparent sea squirt)138945.28
    55% 
    CITK8Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)50171.44
    81% 
    CLAM3Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)31071.01
    92% 
    CLAMSClavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667)31661.00
    86% 
    CLOABClostridium acetobutylicum38451.18
    77% 
    CLOB1Clostridium botulinum (strain ATCC 19397 / Type A)35471.04
    94% 
    CLOB8Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)50031.58
    82% 
    CLOBAClostridium botulinum (strain Alaska E43 / type E3)32531.00
    92% 
    CLOBBClostridium botulinum (strain Eklund 17B / type B)35251.05
    88% 
    CLOBHClostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)36691.06
    93% 
    CLOBKClostridium botulinum (strain Okra / Type B1)38501.10
    92% 
    CLOBLClostridium botulinum (strain Langeland / NCTC 10281 / Type F)36331.07
    93% 
    CLOBMClostridium botulinum (strain Loch Maree / Type A3)39821.15
    89% 
    CLOCEClostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10)32861.14
    77% 
    CLOD6Clostridium difficile (strain 630)37441.18
    78% 
    CLOK5Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)38231.11
    77% 
    CLONNClostridium novyi (strain NT)23050.73
    86% 
    CLOP1Clostridium perfringens (strain ATCC 13124 / NCTC 8237)28730.90
    94% 
    CLOPEClostridium perfringens27220.86
    94% 
    CLOPHClostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)38891.31
    75% 
    CLOPSClostridium perfringens (strain SM101)25660.79
    93% 
    CLOTEClostridium tetani23460.79
    88% 
    CLOTHClostridium thermocellum (strain ATCC 27405 / DSM 1237)31021.04
    74% 
    COLP3Colwellia psychrerythraea (strain 34H / ATCC BAA-681)48681.50
    74% 
    COPPDCoprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT)14810.44
    64% 
    CORA7Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1)25040.81
    82% 
    CORDICorynebacterium diphtheriae23100.74
    81% 
    COREFCorynebacterium efficiens29330.96
    83% 
    CORGBCorynebacterium glutamicum (strain R)30760.96
    90% 
    CORGLCorynebacterium glutamicum35161.10
    81% 
    CORJKCorynebacterium jeikeium (strain K411)20460.71
    88% 
    CORK4Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717)20180.71
    81% 
    CORU7Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109)20090.70
    86% 
    COXB2Coxiella burnetii (strain CbuG_Q212)18260.51
    85% 
    COXBNCoxiella burnetii (strain Dugway 5J108-111)21100.62
    83% 
    COXBRCoxiella burnetii (strain RSA 331 / Henzerling II)18890.51
    88% 
    COXBUCoxiella burnetii20200.56
    86% 
    CRYCDCryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3)13550.47
    76% 
    CRYNECryptococcus neoformans62313.34
    63% 
    CRYPVCryptosporidium parvum38042.27
     35%
    CUPTRCupriavidus taiwanensis (strain R1 / LMG 19424)59001.89
    91% 
    CYAA5Cyanothece (strain ATCC 51142)52331.56
    75% 
    CYAP0Cyanothece sp. (strain PCC 8802)44031.34
    84% 
    CYAP4Cyanothece sp. (strain PCC 7425 / ATCC 29141)52311.61
    73% 
    CYTH3Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)37701.33
    66% 
    DANREDanio rerio (Zebrafish)2303910.46
    72% 
    DAPPUDaphnia pulex (Water flea)300889.92
     31%
    DASNODasypus novemcinctus (Armadillo)153846.16
    84% 
    DEBHADebaryomyces hansenii62633.00
    84% 
    DECARDechloromonas aromatica (strain RCB)41491.37
    86% 
    DEHE1Dehalococcoides ethenogenes (strain 195)15000.42
    86% 
    DEHSBDehalococcoides sp. (strain BAV1)13550.40
    93% 
    DEHSCDehalococcoides sp. (strain CBDB1)14530.42
    89% 
    DEIDVDeinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923)34461.08
    79% 
    DEIGDDeinococcus geothermalis (strain DSM 11300)28210.90
    87% 
    DEIRADeinococcus radiodurans30840.95
    75% 
    DELASDelftia acidovorans (strain DSM 14801 / SPH-1)59662.00
    86% 
    DESAADesulfatibacillum alkenivorans (strain AK-01)51921.87
    69% 
    DESAHDesulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)47771.62
    73% 
    DESAPDesulforudis audaxviator (strain MP104C)21350.66
    78% 
    DESDGDesulfovibrio desulfuricans (strain G20)37191.11
    72% 
    DESHDDesulfitobacterium hafniense (strain DCB-2 / DSM 10664)48521.50
    88% 
    DESHYDesulfitobacterium hafniense (strain Y51)50151.60
    88% 
    DESK1Desulfurococcus kamchatkensis (strain 1221n / DSM 18924)14700.40
    75% 
    DESOHDesulfococcus oleovorans (strain DSM 6200 / Hxd3)32551.15
    78% 
    DESPSDesulfotalea psychrophila32351.04
    68% 
    DESRMDesulfotomaculum reducens (strain MI-1)32140.98
    79% 
    DESVHDesulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303)35141.07
    83% 
    DESVVDesulfovibrio vulgaris subsp. vulgaris (strain DP4)30841.04
    94% 
    DIASTDiaphorobacter sp. (strain TPSY)34601.12
    97% 
    DICDIDictyostelium discoideum (Slime mold)129216.88
     32%
    DICNVDichelobacter nodosus (strain VCS1703A)12730.42
    77% 
    DICT6Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)19120.61
    89% 
    DICTDDictyoglomus turgidum (strain Z-1310 / DSM 6724)17430.57
    95% 
    DINSHDinoroseobacter shibae (strain DFL 12)40741.29
    86% 
    DIPORDipodomys ordii (Kangaroo rat)156657.82
    95% 
    DROMEDrosophila melanogaster (Fruitfly)143217.55
    85% 
    DROPSDrosophila pseudoobscura (Fruit Fly)98185.10
    95% 
    DROWIDrosophila willistoni152457.45
    76% 
    DYAFDDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)57032.08
    70% 
    ECHTEEchinops telfairi (Tenrec)165197.37
    89% 
    ECO24Escherichia coli O139:H28 (strain E24377A / ETEC)49121.47
    91% 
    ECO27Escherichia coli O127:H6 (strain E2348/69 / EPEC)47551.46
    94% 
    ECO45Escherichia coli O45:K1 (strain S88 / ExPEC)49471.51
    97% 
    ECO55Escherichia coli (strain 55989 / EAEC)49371.52
    96% 
    ECO57Escherichia coli O157:H752021.59
    93% 
    ECO5EEscherichia coli O157:H7 (strain EC4115 / EHEC)52721.54
    90% 
    ECO7IEscherichia coli O7:K1 (strain IAI39 / ExPEC)46891.47
    96% 
    ECO81Escherichia coli O81 (strain ED1a)51321.54
    92% 
    ECO8AEscherichia coli O8 (strain IAI1)44141.38
    97% 
    ECOBBEscherichia coli (strain B / BL21)41571.32
    95% 
    ECODHEscherichia coli (strain DH10B)40501.27
    98% 
    ECOHSEscherichia coli O9:H4 (strain HS)43101.32
    94% 
    ECOK1Escherichia coli O1:K1 / APEC48641.59
    97% 
    ECOL5Escherichia coli O6:K15:H31 (strain 536)46461.45
    95% 
    ECOL6Escherichia coli O653361.56
    90% 
    ECOLCEscherichia coli (strain ATCC 8739 / DSM 1576 / Crooks)41711.35
    99% 
    ECOLIEscherichia coli (strain K12)43521.37
    97% 
    ECOLUEscherichia coli O17:K52:H18 (strain UMN026 / ExPEC)50541.57
    96% 
    ECOSEEscherichia coli (strain SE11)49821.51
    94% 
    ECOSMEscherichia coli (strain SMS-3-5 / SECEC)48761.50
    93% 
    ECOUTEscherichia coli (strain UTI89 / UPEC)51901.56
    96% 
    EHRCJEhrlichia canis (strain Jake)9210.31
    89% 
    EHRCREhrlichia chaffeensis (strain Arkansas)10970.31
    73% 
    EHRRGEhrlichia ruminantium (strain Gardel)9490.32
    96% 
    EHRRWEhrlichia ruminantium (strain Welgevonden)9580.32
    95% 
    ELUMPElusimicrobium minutum (strain Pei191)15280.49
    59% 
    ENCCUEncephalitozoon cuniculi18950.69
     33%
    ENT38Enterobacter sp. (strain 638)42361.36
    95% 
    ENTFAEnterococcus faecalis32390.95
    73% 
    ENTS8Enterobacter sakazakii (strain ATCC BAA-894)42551.29
    85% 
    ERIEUErinaceus europaeus (Hedgehog )144896.65
    93% 
    ERWCTErwinia carotovora (subsp. atroseptica)44761.45
    89% 
    ERWT9Erwinia tasmaniensis (strain DSM 17950 / ET1/99)36911.16
    86% 
    ERYLHErythrobacter litoralis (strain HTCC2594)29990.93
    81% 
    EUBE2Eubacterium eligens (strain ATCC 27750 / VPI C15-48)27610.86
    66% 
    EXIS2Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)30050.88
    85% 
    EXISAExiguobacterium sp. (strain ATCC BAA-1283 / AT1b)30200.89
    84% 
    FELCAFelis catus (Cat)147526.69
    95% 
    FERNBFervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1)17250.58
    88% 
    FIBSSFibrobacter succinogenes (strain ATCC 19169 / S85)30841.16
     46%
    FINM2Finegoldia magna (strain ATCC 29328)18130.60
    74% 
    FLAJ1Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)50161.77
    74% 
    FLAPJFlavobacterium psychrophilum (strain JIP02/86 / ATCC 49511)24280.81
    82% 
    FRAAAFrankia alni (strain ACN14a)67232.16
    70% 
    FRAP2Francisella philomiragia subsp. philomiragia (strain ATCC 25017)18750.61
    88% 
    FRASCFrankia sp. (strain CcI3)44231.51
    80% 
    FRASNFrankia sp. (strain EAN1pec)71282.47
    72% 
    FRAT1Mycobacteriophage FRAT117220.54
    99% 
    FRATFFrancisella tularensis subsp. holarctica (strain FTA)15080.46
    97% 
    FRATHFrancisella tularensis subsp. holarctica (strain LVS)18690.53
    85% 
    FRATMFrancisella tularensis subsp. mediasiatica (strain FSC147)13870.44
    99% 
    FRATNFrancisella tularensis subsp. novicida (strain U112)17190.57
    95% 
    FRATOFrancisella tularensis subsp. holarctica (strain OSU18)15060.45
    96% 
    FRATTFrancisella tularensis (subsp. tularensis)17220.54
    99% 
    FRATWFrancisella tularensis subsp. tularensis (strain WY96-3418)15730.48
    97% 
    FUGRUTakifugu rubripes (Fugu)2292912.88
    76% 
    FUSNNFusobacterium nucleatum subsp. nucleatum20480.64
    62% 
    GASACGasterosteus aculeatus (Three spined stickleback)2183211.12
    83% 
    GEOBBGeobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)40091.33
    84% 
    GEOKAGeobacillus kaustophilus35031.00
    86% 
    GEOLSGeobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ)36431.20
    82% 
    GEOMGGeobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)34611.19
    90% 
    GEOSLGeobacter sulfurreducens34151.13
    88% 
    GEOSWGeobacillus sp. (strain WCH70)30480.88
    90% 
    GEOTNGeobacillus thermodenitrificans (strain NG80-2)34191.00
    89% 
    GEOURGeobacter uraniumreducens (strain Rf4)42531.45
    84% 
    GIALAGiardia lamblia47402.64
     19%
    GLOVIGloeobacter violaceus44061.38
    60% 
    GLUDAGluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)38501.19
    78% 
    GLUOXGluconobacter oxydans26030.85
    79% 
    GORGOGorilla gorilla (Gorilla)166777.36
    94% 
    GRABCGranulobacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)24350.82
    84% 
    GRAFKGramella forsetii (strain KT0803)35541.14
    73% 
    GUITHGuillardia theta (nucleomorph only)5990.18
     50%
    HAEDUHaemophilus ducreyi16930.47
    82% 
    HAEI8Haemophilus influenzae (strain 86-028NP)17880.55
    95% 
    HAEIEHaemophilus influenzae (strain PittEE)16180.48
    93% 
    HAEIGHaemophilus influenzae (strain PittGG)16650.47
    91% 
    HAEINHaemophilus influenzae17030.52
    94% 
    HAEPSHaemophilus parasuis serovar 5 (strain SH0165)19910.59
    87% 
    HAES1Haemophilus somnus (strain 129PT)17920.59
    92% 
    HAES2Haemophilus somnus (strain 2336)19710.66
    91% 
    HAHCHHahella chejuensis (strain KCTC 2396)67002.11
    65% 
    HALHLHalorhodospira halophila (strain DSM 244 / SL1)24050.82
    81% 
    HALLTHalorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34)34931.01
    74% 
    HALMAHaloarcula marismortui42251.20
    75% 
    HALMDHalomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541)31680.90
    82% 
    HALOHHalothermothrix orenii (strain H 168 / OCM 544 / DSM 9562)23240.74
    76% 
    HALS3Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)27420.76
    90% 
    HALSAHalobacterium salinarium24110.68
    93% 
    HALUDHalorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2)29980.91
    77% 
    HALWDHaloquadratum walsbyi (strain DSM 16790)28190.80
    71% 
    HAMD5Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT)20390.56
    66% 
    HELAHHelicobacter acinonychis (strain Sheeba)15940.46
    80% 
    HELHPHelicobacter hepaticus18690.56
    71% 
    HELMIHeliobacterium modesticaldum (strain ATCC 51547 / Ice1)29180.85
    68% 
    HELP2Helicobacter pylori (strain P12)15730.50
    93% 
    HELPGHelicobacter pylori (strain G27)15000.48
    95% 
    HELPHHelicobacter pylori (strain HPAG1)15390.49
    93% 
    HELPJHelicobacter pylori J9914880.49
    95% 
    HELPSHelicobacter pylori (strain Shi470)15640.48
    88% 
    HELPYHelicobacter pylori15600.50
    91% 
    HELROHelobdella robusta232638.76
     38%
    HERA2Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)52541.96
    59% 
    HERARHerminiimonas arsenicoxydans33211.00
    88% 
    HIRBIHirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418)31871.05
    81% 
    HORSEEquus caballus (Horse)2027510.35
    91% 
    HUMANHomo sapiens (Human)2838312.88
    73% 
    HYDS0Hydrogenobaculum sp. (strain Y04AAS1)16260.49
    77% 
    HYPBUHyperthermus butylicus (strain DSM 5456 / JCM 9403)16020.45
    70% 
    HYPNAHyphomonas neptunium (strain ATCC 15444)34991.11
    82% 
    IDILOIdiomarina loihiensis26080.86
    88% 
    IGNH4Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)14340.40
    62% 
    IXOSCIxodes scapularis (Tick)204545.81
     37%
    JANMAJanthinobacterium sp. (strain Marseille) (Minibacterium massiliensis)36951.22
    92% 
    JANSCJannaschia sp. (strain CCS1)42691.32
    81% 
    JONDDJonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134)24950.82
    79% 
    KINRDKineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)46731.49
    74% 
    KLEP3Klebsiella pneumoniae (strain 342)57381.71
    88% 
    KLEP7Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)51161.60
    94% 
    KLULAKluyveromyces lactis (Yeast)52302.48
    84% 
    KOCRDKocuria rhizophila (strain ATCC 9341 / NBRC 12708 / DC2201)23530.79
    82% 
    KORCOKorarchaeum cryptofilum (strain OPF8)16020.47
    70% 
    LACACLactobacillus acidophilus18600.58
    85% 
    LACBALactobacillus brevis (strain ATCC 367 / JCM 1170)21990.65
    82% 
    LACBILaccaria bicolor200527.45
     27%
    LACC3Lactobacillus casei (strain ATCC 334)27060.78
    90% 
    LACCBLactobacillus casei (strain BL23)29990.86
    88% 
    LACDALactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081)20140.52
    77% 
    LACDBLactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365)16790.47
    89% 
    LACF3Lactobacillus fermentum (strain IFO 3956 / LMG 18251)18180.55
    86% 
    LACGALactobacillus gasseri (strain ATCC 33323 / DSM 20243)16940.54
    92% 
    LACH4Lactobacillus helveticus (strain DPC 4571)15760.50
    92% 
    LACJOLactobacillus johnsonii18120.59
    90% 
    LACLALactococcus lactis subsp. lactis22210.66
    89% 
    LACLMLactococcus lactis subsp. cremoris (strain MG1363)24530.71
    87% 
    LACLSLactococcus lactis subsp. cremoris (strain SK11)24360.68
    85% 
    LACPJLactobacillus plantarum (strain JDM1)29470.89
    94% 
    LACPLLactobacillus plantarum30380.92
    92% 
    LACRDLactobacillus reuteri (strain DSM 20016)18640.56
    96% 
    LACRJLactobacillus reuteri (strain JCM 1112)17920.56
    99% 
    LACS1Lactobacillus salivarius subsp. salivarius (strain UCC118)20010.58
    79% 
    LACSSLactobacillus sakei subsp. sakei (strain 23K)18710.54
    83% 
    LAMPALama guanicoe pacos (Alpaca)116715.48
    93% 
    LARHHLaribacter hongkongensis (strain HLHK9)32060.92
    73% 
    LAWIPLawsonia intracellularis (strain PHE/MN1-00)13440.48
    79% 
    LEGPALegionella pneumophila (strain Paris)30591.02
    95% 
    LEGPCLegionella pneumophila (strain Corby)32041.03
    91% 
    LEGPHLegionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152)29151.00
    94% 
    LEGPLLegionella pneumophila (strain Lens)29300.98
    94% 
    LEIBRLeishmania braziliensis80195.03
    91% 
    LEIINLeishmania infantum80315.02
    96% 
    LEIMALeishmania major78975.10
    98% 
    LEIXXLeifsonia xyli (subsp. xyli)19990.59
    76% 
    LEPBALeptospira biflexa serovar Patoc (strain Patoc 1 / Ames)35941.21
    99% 
    LEPBJLeptospira borgpetersenii serovar Hardjo-bovis (strain JB197)28270.92
    99% 
    LEPBLLeptospira borgpetersenii serovar Hardjo-bovis (strain L550)28710.94
    99% 
    LEPBPLeptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris)37231.22
    96% 
    LEPCPLeptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6)43431.50
    87% 
    LEPICLeptospira interrogans (serogroup Icterohaemorrhagiae / serovar Copenhageni)36401.15
    93% 
    LEPINLeptospira interrogans46871.21
    74% 
    LEUCKLeuconostoc citreum (strain KM20)18120.56
    88% 
    LEUMMLeuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523)20020.61
    86% 
    LISINListeria innocua30290.91
    94% 
    LISMCListeria monocytogenes serotype 4b (strain Clip81459)27890.86
    98% 
    LISMFListeria monocytogenes (serotype 4b / strain F2365)28180.85
    97% 
    LISMHListeria monocytogenes serotype 4a (strain HCC23)29710.88
    93% 
    LISMOListeria monocytogenes28520.87
    98% 
    LISW6Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)27750.83
    93% 
    LODELLodderomyces elongisporus57722.94
    78% 
    LOTGILottia gigantea (Limpet)235148.96
    54% 
    LOXAFLoxodonta africana (Elephant)156407.46
    91% 
    LYSSCLysinibacillus sphaericus (strain C3-41)47501.28
    71% 
    MACCJMacrococcus caseolyticus (strain JCSC5402)20590.64
    85% 
    MACEUMacropus eugenii (Wallaby)152577.26
    92% 
    MACMUMacaca mulatta (Rhesus macaque)2489111.40
    79% 
    MAGGRMagnaporthe grisea (rice blast fungus)126375.57
    54% 
    MAGMMMagnetospirillum magneticum (strain AMB-1 / ATCC 700264)45031.45
    71% 
    MAGSMMagnetococcus sp. (strain MC-1)35891.33
    66% 
    MANSMMannheimia succiniciproducens (strain MBEL55E)23660.69
    82% 
    MARAVMarinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8)41681.39
    81% 
    MARMMMaricaulis maris (strain MCS10)30601.01
    80% 
    MARMSMarinomonas sp. (strain MWYL1)44151.48
    84% 
    MESFLMesoplasma florum6830.25
    76% 
    MESSBMesorhizobium sp. (strain BNC1)45301.45
    86% 
    META3Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280)14900.44
    91% 
    METACMethanosarcina acetivorans44631.39
    72% 
    METB6Methanoregula boonei (strain 6A8)24500.73
    76% 
    METBFMethanosarcina barkeri (strain Fusaro / DSM 804)36001.12
    82% 
    METBUMethanococcoides burtonii (strain DSM 6242)22420.68
    79% 
    METC4Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688)54901.70
    91% 
    METCAMethylococcus capsulatus29210.97
    73% 
    METEPMethylobacterium extorquens (strain PA1)48221.53
    94% 
    METFAMethanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86)15460.44
    94% 
    METFKMethylobacillus flagellatus (strain KT / ATTC 51484 / DSM 6875)26080.85
    90% 
    METHJMethanospirillum hungatei (strain JF-1 / DSM 864)30840.99
    67% 
    METI4Methylokorus infernorum (strain V4)24700.69
    52% 
    METJAMethanocaldococcus jannaschii17820.50
    88% 
    METKAMethanopyrus kandleri16900.50
    58% 
    METLZMethanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z)17390.52
    77% 
    METM5Methanococcus maripaludis (strain C5 / ATCC BAA-1333)18210.51
    92% 
    METM6Methanococcus maripaludis (strain C6 / ATCC BAA-1332)18250.51
    93% 
    METM7Methanococcus maripaludis (strain C7 / ATCC BAA-1331)17850.51
    95% 
    METMAMethanosarcina mazei32981.00
    86% 
    METMJMethanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1)24740.71
    79% 
    METMPMethanococcus maripaludis17220.49
    97% 
    METNOMethylobacterium nodulans (strain ORS2060 / LMG 21967)81252.31
    76% 
    METPBMethylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)53251.65
    90% 
    METPEMethanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)26550.82
    74% 
    METPPMethylibium petroleiphilum (strain PM1)43551.38
    82% 
    METRJMethylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)63851.94
    83% 
    METS3Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861)17830.55
    71% 
    METS4Methylobacterium sp. (strain 4-46)66462.08
    87% 
    METS5Metallosphaera sedula (strain ATCC 51363 / DSM 5348)22560.64
    88% 
    METSBMethylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906)38161.22
    85% 
    METSDMethylovorus sp. (strain SIP3-4)29060.93
    85% 
    METSTMethanosphaera stadtmanae (strain DSM 3091)15300.49
    76% 
    METTHMethanobacterium thermoautotrophicum18680.52
    76% 
    METTPMethanosaeta thermophila (strain DSM 6194 / PT)16730.51
    78% 
    METVMMethanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7)17250.49
    89% 
    METVSMethanococcus vannielii (strain SB / ATCC 35089 / DSM 1224)16610.48
    94% 
    MICANMicrocystis aeruginosa (strain NIES-843)59461.51
    59% 
    MICMUMicrocebus murinus (Mouse lemur)162247.67
    95% 
    MONBEMonosiga brevicollis91645.50
     39%
    MONDOMonodelphis domestica (Opossum)2184311.44
    81% 
    MOOTAMoorella thermoacetica (strain ATCC 39073)24500.75
    83% 
    MOUSEMus musculus (Mouse)2486511.87
    81% 
    MYCA1Mycobacterium avium (strain 104)50351.58
    89% 
    MYCA5Mycoplasma arthritidis (strain 158L3-1)6310.24
    66% 
    MYCA9Mycobacterium abscessus (strain ATCC 19977 / DSM 44196)49391.57
    82% 
    MYCAPMycoplasma agalactiae (strain PG2)7480.26
    68% 
    MYCBOMycobacterium bovis39391.31
    99% 
    MYCBPMycobacterium bovis (strain BCG / Paris 1173P2)39241.31
    99% 
    MYCCRMycoplasma conjunctivae (strain ATCC 25834 / HRC/581 / NCTC 10147)6940.26
    75% 
    MYCCTMycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154)8110.30
    85% 
    MYCGAMycoplasma gallisepticum7260.29
    67% 
    MYCGEMycoplasma genitalium4830.18
    97% 
    MYCGIMycobacterium gilvum (strain PYR-GCK)54931.80
    93% 
    MYCH2Mycoplasma hyopneumoniae (strain 232)6820.27
    91% 
    MYCH7Mycoplasma hyopneumoniae (strain 7448)6570.26
    96% 
    MYCHJMycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110)6590.26
    94% 
    MYCLBMycobacterium leprae (strain Br4923)26910.83
    99% 
    MYCLEMycobacterium leprae26990.83
    99% 
    MYCMMMycobacterium marinum (strain ATCC BAA-535 / M)54181.98
    91% 
    MYCMOMycoplasma mobile6330.23
    75% 
    MYCMSMycoplasma mycoides subsp. mycoides SC9750.32
    72% 
    MYCPAMycobacterium paratuberculosis43111.45
    95% 
    MYCPEMycoplasma penetrans10210.40
    54% 
    MYCPNMycoplasma pneumoniae6860.24
    73% 
    MYCPUMycoplasma pulmonis7740.29
    71% 
    MYCS2Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)65932.08
    86% 
    MYCS5Mycoplasma synoviae (strain 53)6690.24
    72% 
    MYCSJMycobacterium sp. (strain JLS)56951.86
    97% 
    MYCSKMycobacterium sp. (strain KMS)58891.90
    98% 
    MYCSSMycobacterium sp. (strain MCS)55861.82
    99% 
    MYCTAMycobacterium tuberculosis (strain ATCC 25177 / H37Ra)39911.33
    99% 
    MYCTFMycobacterium tuberculosis (strain F11)38551.30
    99% 
    MYCTUMycobacterium tuberculosis50151.65
    87% 
    MYCUAMycobacterium ulcerans (strain Agy99)41941.39
    90% 
    MYCVPMycobacterium vanbaalenii (strain DSM 7251 / PYR-1)59011.95
    93% 
    MYOLUMyotis lucifugus (Microbat)161297.54
    93% 
    MYXXDMyxococcus xanthus (strain DK 1622)72162.76
    57% 
    NANEQNanoarchaeum equitans5360.15
     47%
    NATPDNatronomonas pharaonis (strain DSM 2160 / ATCC 35678)28010.82
    78% 
    NATTJNatranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF)28360.89
    74% 
    NAUPANautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH)17300.52
    80% 
    NEIG1Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)19430.55
    92% 
    NEIG2Neisseria gonorrhoeae (strain NCCP11945)25920.63
    72% 
    NEIM0Neisseria meningitidis serogroup C (strain 053442)19980.57
    91% 
    NEIMANeisseria meningitidis serogroup A19710.59
    94% 
    NEIMBNeisseria meningitidis serogroup B20010.58
    90% 
    NEIMFNeisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18)19390.59
    96% 
    NEMVENematostella vectensis (Sea anemone)260368.87
     50%
    NEOSMNeorickettsia sennetsu (strain Miyayama)9300.25
    55% 
    NEUCRNeurospora crassa75693.68
    ---
    NITECNitrosomonas eutropha (strain C71)24700.77
    88% 
    NITEUNitrosomonas europaea24630.80
    89% 
    NITHXNitrobacter hamburgensis (strain X14 / DSM 10229)42261.29
    85% 
    NITMSNitrosopumilus maritimus (strain SCM1)17950.49
    71% 
    NITMUNitrosospira multiformis (strain ATCC 25196 / NCIMB 11849)27230.90
    83% 
    NITOCNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)29440.98
    74% 
    NITSBNitratiruptor sp. (strain SB155-2)18570.59
    85% 
    NITWNNitrobacter winogradskyi (strain Nb-255 / ATCC 25391)29560.92
    89% 
    NOCFANocardia farcinica59291.88
    79% 
    NOCSJNocardioides sp. (strain BAA-499 / JS614)48841.59
    76% 
    NOSP7Nostoc punctiforme (strain ATCC 29133 / PCC 73102)65722.29
    77% 
    NOVADNovosphingobium aromaticivorans (strain DSM 12444)39171.29
    82% 
    OCEIHOceanobacillus iheyensis34921.02
    84% 
    OCHA4Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)47571.50
    91% 
    OCHPROchotona princeps (Pika)157177.67
    95% 
    OENOBOenococcus oeni (strain BAA-331 / PSU-1)16820.49
    79% 
    OLICOOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)38451.13
    83% 
    ONYPEOnion yellows phytoplasma7040.20
    66% 
    OPITPOpitutus terrae (strain DSM 11246 / PB90-1)45881.75
    57% 
    ORITBOrientia tsutsugamushi (strain Boryong)18040.50
    55% 
    ORITIOrientia tsutsugamushi (strain Ikeda)16250.44
    64% 
    ORNANOrnithorhynchus anatinus (Platypus)197308.05
    70% 
    ORYLAOryzias latipes (Japanese medaka)2167610.77
    80% 
    ORYSAOryza sativa (Rice)2637610.60
    69% 
    OSTLUOstreococcus lucimarinus74102.99
     50%
    OTOGAOtolemur garnettii (Bushbaby)153837.01
    93% 
    PAESJPaenibacillus sp. (strain JDR-2)62092.10
    70% 
    PANTRPan troglodytes (Chimpanzee)2328311.04
    86% 
    PARD8Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)38311.44
    79% 
    PARDPParacoccus denitrificans (strain Pd 1222)50151.56
    83% 
    PARL1Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)35791.15
    87% 
    PARUWParachlamydia sp. (strain UWE25) (subsp. Acanthamoeba sp.)20240.66
     49%
    PASMUPasteurella multocida20140.67
    93% 
    PEDHDPedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)42491.59
    73% 
    PEDPAPediococcus pentosaceus (strain ATCC 25745 / 183-1w)17550.54
    87% 
    PELCDPelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)33401.06
    77% 
    PELLDPelodictyon luteolum (strain DSM 273)20740.70
    92% 
    PELPBPelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1)26850.85
    84% 
    PELPDPelobacter propionicus (strain DSM 2379)36911.20
    81% 
    PELTSPelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI)28780.85
    74% 
    PELUBPelagibacter ubique13530.42
    76% 
    PERMHPersephonella marina (strain DSM 14350 / EX-H1)20470.62
    77% 
    PETMOPetrotoga mobilis (strain DSM 10674 / SJ95)18890.64
    79% 
    PHANOPhaeosphaeria nodorum164896.45
     46%
    PHEZHPhenylobacterium zucineum (strain HLK1)38371.28
    90% 
    PHOAAPhotorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)43431.39
    81% 
    PHOLLPhotorhabdus luminescens (subsp. laumondii)47521.54
    81% 
    PHOPRPhotobacterium profundum52221.66
    82% 
    PHYASPhytoplasma australiense7800.21
    57% 
    PHYMTPhytoplasma mali (strain AT)4620.15
    73% 
    PICSTPichia stipitis58002.85
    91% 
    PICTOPicrophilus torridus15350.47
    80% 
    PIGXXSus scrofa (Pig)172188.04
    89% 
    PLAF7Plasmodium falciparum (Malaria parasite)55034.10
     27%
    POLNAPolaromonas naphthalenivorans (strain CJ2)48731.56
    85% 
    POLNSPolynucleobacter necessarius (strain STIR1)15070.40
    77% 
    POLSJPolaromonas sp. (strain JS666 / ATCC BAA-500)54361.71
    85% 
    POLSQPolynucleobacter sp. (strain QLW-P1DMWA-1)20740.67
    90% 
    PONABPongo pygmaeus abelii (Orangutan)200899.95
    94% 
    POPTRPopulus trichocarpa (Western balsam poplar)4433814.80
    52% 
    PORG3Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257)20210.66
    83% 
    PORGIPorphyromonas gingivalis18540.63
    89% 
    PRIPAPristionchus pacificus (Nematode)293638.48
     23%
    PROA2Prosthecochloris aestuarii (strain DSM 271 / SK 413)23190.75
    87% 
    PROACPropionibacterium acnes22920.76
    72% 
    PROCAProcavia capensis (Hyrax)159547.85
    95% 
    PROM0Prochlorococcus marinus (strain MIT 9301)19060.50
    91% 
    PROM1Prochlorococcus marinus (strain NATL1A)21730.54
    89% 
    PROM2Prochlorococcus marinus (strain MIT 9215)19830.52
    89% 
    PROM3Prochlorococcus marinus (strain MIT 9303)29830.76
    72% 
    PROM4Prochlorococcus marinus (strain MIT 9211)18540.50
    87% 
    PROM5Prochlorococcus marinus (strain MIT 9515)18990.50
    90% 
    PROM9Prochlorococcus marinus (strain MIT 9312)19590.51
    90% 
    PROMAProchlorococcus marinus18810.52
    89% 
    PROMHProteus mirabilis (strain HI4320)37361.16
    84% 
    PROMMProchlorococcus marinus (strain MIT 9313)22640.66
    90% 
    PROMPProchlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4)19520.50
    90% 
    PROMSProchlorococcus marinus (strain AS9601)19200.50
    92% 
    PROMTProchlorococcus marinus (strain NATL2A)21410.53
    90% 
    PROVIProsthecochloris vibrioformis (strain DSM 265)17500.59
    95% 
    PSE14Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6)50541.66
    91% 
    PSEA6Pseudoalteromonas atlantica (strain T6c / BAA-1087)42711.49
    85% 
    PSEA7Pseudomonas aeruginosa (strain PA7)62461.95
    90% 
    PSEA8Pseudomonas aeruginosa (strain LESB58)59371.94
    96% 
    PSEABPseudomonas aeruginosa (strain UCBPP-PA14)58861.94
    97% 
    PSEAEPseudomonas aeruginosa55571.86
    99% 
    PSEE4Pseudomonas entomophila (strain L48)51591.74
    92% 
    PSEF5Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)61352.09
    92% 
    PSEFSPseudomonas fluorescens (strain SBW25)64752.11
    85% 
    PSEHTPseudoalteromonas haloplanktis (strain TAC 125)34791.12
    85% 
    PSEMYPseudomonas mendocina (strain ymp)45631.50
    93% 
    PSEP1Pseudomonas putida (strain F1 / ATCC 700007)52441.76
    96% 
    PSEPFPseudomonas fluorescens (strain PfO-1)57261.92
    92% 
    PSEPGPseudomonas putida (strain GB-1)53961.80
    94% 
    PSEPKPseudomonas putida (strain KT2440)53051.77
    93% 
    PSEPWPseudomonas putida (strain W619)51791.71
    94% 
    PSESMPseudomonas syringae (pv. tomato)54041.78
    89% 
    PSEU2Pseudomonas syringae pv. syringae (strain B728a)51161.78
    94% 
    PSEU5Pseudomonas stutzeri (strain A1501)40931.35
    89% 
    PSYA2Psychrobacter arcticus (strain DSM 17307 / 273-4)21250.71
    92% 
    PSYCKPsychrobacter cryohalolentis (strain K5)24510.84
    93% 
    PSYINPsychromonas ingrahamii (strain 37)35301.17
    84% 
    PSYWFPsychrobacter sp. (strain PRwf-1)23380.82
    87% 
    PTEVAPteropus vampyrus (Megabat)168819.06
    98% 
    PYRABPyrococcus abyssi17860.54
    95% 
    PYRAEPyrobaculum aerophilum26000.66
    80% 
    PYRARPyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)22950.61
    90% 
    PYRCJPyrobaculum calidifontis (strain JCM 11548 / VA1)21480.61
    91% 
    PYRFUPyrococcus furiosus20520.58
    87% 
    PYRHOPyrococcus horikoshii20770.57
    78% 
    PYRILPyrobaculum islandicum (strain DSM 4184 / JCM 9189)19760.53
    90% 
    PYRKOThermococcus kodakaraensis23000.64
    85% 
    RABITOryctolagus cuniculus (Rabbit)153177.37
    90% 
    RALEHRalstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)66132.16
    93% 
    RALEJRalstonia eutropha (strain JMP134)64272.11
    92% 
    RALMERalstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)61932.00
    89% 
    RALPJRalstonia pickettii (strain 12J)48861.54
    89% 
    RALSORalstonia solanacearum50091.66
    86% 
    RATNORattus norvegicus (Rat)2477011.64
    79% 
    RENSMRenibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589)34200.93
    67% 
    RHIE6Rhizobium etli (strain CIAT 652)60981.86
    91% 
    RHIECRhizobium etli (strain CFN 42 / ATCC 51251)59641.87
    93% 
    RHIL3Rhizobium leguminosarum bv. viciae (strain 3841)72432.25
    90% 
    RHILORhizobium loti72472.17
    78% 
    RHILWRhizobium leguminosarum bv. trifolii (strain WSM2304)64031.98
    93% 
    RHIMERhizobium meliloti61191.89
    90% 
    RHOBARhodopirellula baltica72562.29
     30%
    RHOCSRhodospirillum centenum (strain ATCC 51521 / SW)40191.27
    77% 
    RHOE4Rhodococcus erythropolis (strain PR4 / NBRC 100887)64242.09
    84% 
    RHOFDRhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)43981.47
    87% 
    RHOOBRhodococcus opacus (strain B4)81692.65
    85% 
    RHOP2Rhodopseudomonas palustris (strain HaA2)46801.55
    95% 
    RHOP5Rhodopseudomonas palustris (strain BisA53)48511.56
    91% 
    RHOPARhodopseudomonas palustris48231.59
    96% 
    RHOPBRhodopseudomonas palustris (strain BisB18)48621.56
    91% 
    RHOPSRhodopseudomonas palustris (strain BisB5)43881.41
    95% 
    RHOPTRhodopseudomonas palustris (strain TIE-1)52421.65
    94% 
    RHORTRhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)38361.29
    84% 
    RHOS1Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)41111.31
    96% 
    RHOS4Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)41221.30
    94% 
    RHOS5Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)41981.30
    89% 
    RHOSKRhodobacter sphaeroides (strain KD131 / KCTC 12085)45401.38
    90% 
    RHOSRRhodococcus sp. (strain RHA1)90652.87
    79% 
    RICAHRickettsia akari (strain Hartford)12550.31
    71% 
    RICB8Rickettsia bellii (strain OSU 85-389)14410.40
    87% 
    RICBRRickettsia bellii (strain RML369-C)13930.42
    92% 
    RICCKRickettsia canadensis (strain McKiel)10910.29
    75% 
    RICCNRickettsia conorii13740.34
    80% 
    RICFERickettsia felis14250.42
    80% 
    RICM5Rickettsia massiliae (strain Mtu5)9690.32
    95% 
    RICPRRickettsia prowazekii8340.28
    95% 
    RICPURickettsia peacockii (strain Rustic)9270.29
    98% 
    RICRORickettsia rickettsii (strain Iowa)13840.32
    85% 
    RICRSRickettsia rickettsii (strain Sheila Smith)13450.32
    87% 
    RICTYRickettsia typhi8360.28
    96% 
    ROSCSRoseiflexus castenholzii (strain DSM 13941 / HLO8)43241.56
    91% 
    ROSDORoseobacter denitrificans (strain ATCC 33942 / OCh 114)39391.24
    87% 
    ROSS1Roseiflexus sp. (strain RS-1)44941.63
    88% 
    RUBXDRubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)31210.98
    67% 
    RUTMCRuthia magnifica subsp. Calyptogena magnifica9760.31
    94% 
    SACD2Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)39931.45
    80% 
    SACENSaccharopolyspora erythraea (strain NRRL 23338)71462.31
    78% 
    SACVDSaccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101)38281.24
    86% 
    SALA4Salmonella agona (strain SL483)45931.37
    92% 
    SALAISalinispora arenicola (strain CNS-205)48471.64
    87% 
    SALARSalmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)44991.33
    86% 
    SALCHSalmonella enterica subsp. enterica serovar Choleraesuis str. SC-B6745811.36
    95% 
    SALDCSalmonella dublin (strain CT_02021853)46071.35
    92% 
    SALEPSalmonella enteritidis PT4 (strain P125109)43031.35
    98% 
    SALG2Salmonella gallinarum (strain 287/91 / NCTC 13346)42581.35
    98% 
    SALHSSalmonella heidelberg (strain SL476)47571.40
    92% 
    SALNSSalmonella newport (strain SL254)47871.42
    92% 
    SALPASalmonella paratyphi-a40761.25
    98% 
    SALPBSalmonella paratyphi B (strain ATCC BAA-1250 / SPB7)55591.44
    80% 
    SALPCSalmonella paratyphi C (strain RKS4594)46001.35
    95% 
    SALPKSalmonella paratyphi A (strain AKU_12601)44901.38
    97% 
    SALRDSalinibacter ruber (strain DSM 13855)28111.01
    63% 
    SALSVSalmonella schwarzengrund (strain CVM19633)46031.36
    92% 
    SALTISalmonella typhi49111.48
    94% 
    SALTOSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)45221.52
    89% 
    SALTYSalmonella typhimurium44911.41
    98% 
    SCHPOSchizosaccharomyces pombe (Fission yeast)51582.35
    64% 
    SERP5Serratia proteamaculans (strain 568)49291.59
    91% 
    SHEAMShewanella amazonensis (strain ATCC BAA-1098 / SB2B)36381.26
    94% 
    SHEB2Shewanella baltica (strain OS223)43831.46
    95% 
    SHEB5Shewanella baltica (strain OS155 / ATCC BAA-1091)42181.39
    96% 
    SHEB8Shewanella baltica (strain OS185)43651.47
    97% 
    SHEB9Shewanella baltica (strain OS195)46161.53
    96% 
    SHEDOShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)37261.27
    89% 
    SHEFNShewanella frigidimarina (strain NCIMB 400)39891.35
    95% 
    SHEHHShewanella halifaxensis (strain HAW-EB4)42751.45
    95% 
    SHELPShewanella loihica (strain BAA-1088 / PV-4)38541.31
    95% 
    SHEONShewanella oneidensis45841.37
    84% 
    SHEPAShewanella pealeana (strain ANG-SQ1 / ATCC 700345)41791.42
    96% 
    SHEPCShewanella putrefaciens (strain CN-32 / ATCC BAA-453)39481.32
    98% 
    SHEPWShewanella piezotolerans (strain WP3 / JCM 13877)48951.51
    83% 
    SHESAShewanella sp. (strain ANA-3)43411.49
    96% 
    SHESHShewanella sediminis (strain HAW-EB3)44931.52
    91% 
    SHESMShewanella sp. (strain MR-4)39181.34
    98% 
    SHESRShewanella sp. (strain MR-7)40031.36
    98% 
    SHESWShewanella sp. (strain W3-18-1)40071.32
    97% 
    SHEWMShewanella woodyi (strain ATCC 51908 / MS32)48651.68
    89% 
    SHIB3Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)41211.15
    91% 
    SHIBSShigella boydii serotype 4 (strain Sb227)38261.15
    96% 
    SHIDSShigella dysenteriae serotype 1 (strain Sd197)37921.07
    88% 
    SHIF8Shigella flexneri serotype 5b (strain 8401)38491.18
    97% 
    SHIFLShigella flexneri42251.33
    93% 
    SHISSShigella sonnei (strain Ss046)39681.24
    97% 
    SILPOSilicibacter pomeroyi42311.37
    90% 
    SILSTSilicibacter sp. (strain TM1040)38451.22
    88% 
    SINMWSinorhizobium medicae (strain WSM419)61451.92
    91% 
    SLAHDSlackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1)27500.90
    53% 
    SODGMSodalis glossinidius (strain morsitans)24800.71
    81% 
    SOLUESolibacter usitatus (strain Ellin6076)77582.98
    55% 
    SORARSorex araneus (Common shrew)130995.86
    91% 
    SORBISorghum bicolor (Sorghum)3544712.81
    57% 
    SORC5Sorangium cellulosum (strain So ce56)93363.75
     46%
    SPETRSpermophilus tridecemlineatus (Squirrel)147986.49
    92% 
    SPHALSphingopyxis alaskensis31811.01
    86% 
    SPHWWSphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273)53111.78
    79% 
    STAA1Staphylococcus aureus (strain Mu3 / ATCC 700698)26770.80
    98% 
    STAA2Staphylococcus aureus (strain JH1)27550.81
    97% 
    STAA3Staphylococcus aureus (strain USA300)25990.79
    98% 
    STAA8Staphylococcus aureus (strain NCTC 8325)28870.80
    91% 
    STAA9Staphylococcus aureus (strain JH9)27020.81
    98% 
    STAABStaphylococcus aureus (strain bovine RF122)25760.76
    95% 
    STAACStaphylococcus aureus (strain COL)26740.77
    93% 
    STAAEStaphylococcus aureus (strain Newman)25700.79
    97% 
    STAAMStaphylococcus aureus (strain Mu50 / ATCC 700699)27230.80
    97% 
    STAANStaphylococcus aureus (strain N315)25910.78
    98% 
    STAARStaphylococcus aureus (strain MRSA252)27170.80
    94% 
    STAASStaphylococcus aureus (strain MSSA476)26420.79
    96% 
    STAATStaphylococcus aureus (strain USA300 / TCH1516)26820.77
    93% 
    STAAWStaphylococcus aureus (strain MW2)26570.79
    96% 
    STACTStaphylococcus carnosus (strain TM300)24600.73
    88% 
    STAEQStaphylococcus epidermidis (strain ATCC 35984 / RP62A)24900.72
    87% 
    STAESStaphylococcus epidermidis (strain ATCC 12228)24390.70
    88% 
    STAHJStaphylococcus haemolyticus (strain JCSC1435)26040.75
    87% 
    STAMFStaphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1)15700.45
    79% 
    STAS1Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229)25070.71
    88% 
    STRA1Streptococcus agalactiae serotype Ia19780.61
    96% 
    STRA3Streptococcus agalactiae (serotype III)20340.62
    94% 
    STRA5Streptococcus agalactiae (serotype V)21020.62
    92% 
    STRAWPhytoplasma sp. (strain STRAWB1)76652.61
    84% 
    STRCOStreptomyces coelicolor80862.64
    84% 
    STRDGStreptococcus dysgalactiae subsp. equisimilis (strain GGS_124)20860.61
    91% 
    STRE4Streptococcus equi subsp. equi (strain 4047)20430.62
    93% 
    STREMStreptococcus equi subsp. zooepidemicus (strain MGCS10565)18610.55
    89% 
    STRGCStreptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288)20500.64
    90% 
    STRGGStreptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)70102.47
    85% 
    STRM5Stenotrophomonas maltophilia (strain R551-3)40261.36
    94% 
    STRMKStenotrophomonas maltophilia (strain K279a)44001.44
    90% 
    STRMUStreptococcus mutans19470.58
    86% 
    STRP1Streptococcus pyogenes serotype M122090.64
    91% 
    STRP2Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)19150.57
    97% 
    STRP3Streptococcus pyogenes (serotype M3)18520.54
    97% 
    STRP4Streptococcus pneumoniae serotype 19F (strain G54)20990.59
    91% 
    STRP6Streptococcus pyogenes (serotype M6)18740.55
    95% 
    STRP8Streptococcus pyogenes (serotype M18)18330.53
    96% 
    STRPBStreptococcus pyogenes serotype M12 (strain MGAS2096)18840.54
    90% 
    STRPCStreptococcus pyogenes serotype M12 (strain MGAS9429)18660.53
    94% 
    STRPDStreptococcus pyogenes serotype M2 (strain MGAS10270)19620.56
    94% 
    STRPFStreptococcus pyogenes serotype M4 (strain MGAS10750)19630.56
    93% 
    STRPGStreptococcus pyogenes serotype M5 (strain Manfredo)18090.53
    97% 
    STRPIStreptococcus pneumoniae (strain Hungary19A-6)21510.62
    92% 
    STRPJStreptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1)21250.64
    96% 
    STRPMStreptococcus pyogenes serotype M2818860.55
    96% 
    STRPNStreptococcus pneumoniae20710.59
    90% 
    STRPSStreptococcus pneumoniae (strain CGSP14)21890.63
    92% 
    STRPZStreptococcus pyogenes serotype M49 (strain NZ131)17020.51
    96% 
    STRR6Streptococcus pneumoniae (strain ATCC BAA-255 / R6)20300.59
    96% 
    STRS2Streptococcus suis (strain 98HAH33)21780.61
    86% 
    STRS7Streptococcus equi subsp. zooepidemicus (strain H70)19400.60
    94% 
    STRSEStreptococcus suis (strain P1/7)18950.59
    98% 
    STRSVStreptococcus sanguinis (strain SK36)22670.70
    88% 
    STRSWStreptomyces scabies (strain 87.22)87582.92
    81% 
    STRSXStreptococcus suis (strain SC84)19700.61
    98% 
    STRSYStreptococcus suis (strain 05ZYH33)21780.61
    86% 
    STRT1Streptococcus thermophilus (strain CNRZ 1066)18970.50
    93% 
    STRT2Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)18660.50
    93% 
    STRTDStreptococcus thermophilus (strain ATCC BAA-491 / LMD-9)17040.47
    88% 
    STRU0Streptococcus uberis (strain ATCC BAA-854 / 0140J)18220.55
    91% 
    STRZJStreptococcus pneumoniae (strain JJA)21160.59
    92% 
    STRZPStreptococcus pneumoniae (strain P1031)20660.58
    93% 
    SULAASulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825)17070.51
    91% 
    SULACSulfolobus acidocaldarius22150.63
    89% 
    SULDNSulfurimonas denitrificans (strain ATCC 33889 / DSM 1251)20820.67
    84% 
    SULIASulfolobus islandicus (strain M.16.27)26500.76
    97% 
    SULIKSulfolobus islandicus (strain M.16.4 / Kamchatka #3)27290.75
    95% 
    SULILSulfolobus islandicus (strain L.S.2.15 / Lassen #1)27240.76
    96% 
    SULIMSulfolobus islandicus (strain M.14.25 / Kamchatka #1)25960.74
    98% 
    SULINSulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2)28500.77
    92% 
    SULIYSulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1)28770.77
    92% 
    SULMWSulcia muelleri (strain GWSS)2270.08
    86% 
    SULNBSulfurovum sp. (strain NBC37-1)24600.77
    77% 
    SULSOSulfolobus solfataricus29280.83
    85% 
    SULSYSulfurihydrogenibium sp. (strain YO3AOP1)17120.52
    92% 
    SULTOSulfolobus tokodaii28120.76
    82% 
    SYMTHSymbiobacterium thermophilum32841.01
    51% 
    SYNASSyntrophus aciditrophicus (strain SB)31380.93
    66% 
    SYNFMSyntrophobacter fumaroxidans (strain DSM 10017 / MPOB)40101.35
    72% 
    SYNJASynechococcus sp. (strain JA-3-3Ab)27120.82
    87% 
    SYNJBSynechococcus sp. (strain JA-2-3B'a(2-13))28210.86
    86% 
    SYNP2Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)31790.99
    83% 
    SYNP6Synechococcus sp. (strain PCC 6301)25210.78
    84% 
    SYNPWSynechococcus sp. (strain WH7803)25300.73
    89% 
    SYNPXSynechococcus sp. (strain WH8102)25230.73
    86% 
    SYNR3Synechococcus sp. (strain RCC307)25320.70
    80% 
    SYNS3Synechococcus sp. (strain CC9311)28810.75
    77% 
    SYNS9Synechococcus sp. (strain CC9902)23010.66
    93% 
    SYNSCSynechococcus sp. (strain CC9605)26310.72
    84% 
    SYNWWSyntrophomonas wolfei subsp. wolfei (strain Goettingen)24710.79
    75% 
    SYNY3Synechocystis sp. (strain PCC 6803)34991.12
    81% 
    TAEGUTaeniopygia guttata (Zebra finch)167807.75
    86% 
    TARSYTarsius syrichta (Tarsier)135006.41
    93% 
    TERTTTeredinibacter turnerae (strain ATCC 39867 / T7901)42491.49
    74% 
    TETNGTetraodon nigroviridis (Green puffer)2000710.11
    88% 
    THEABThermosipho africanus (strain TCF52B)19180.60
    90% 
    THEACThermoplasma acidophilum14810.45
    88% 
    THEEBThermosynechococcus elongatus (strain BP-1)24470.77
    86% 
    THEFYThermobifida fusca (strain YX)31081.03
    80% 
    THEGJThermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)21570.64
    87% 
    THELTThermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO)20400.67
    87% 
    THEM4Thermosipho melanesiensis (strain BI429 / DSM 12029)18770.58
    89% 
    THEMAThermotoga maritima18520.58
    95% 
    THENVThermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta)19650.53
    94% 
    THEONThermococcus onnurineus (strain NA1)19760.56
    90% 
    THEP1Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)17830.57
    98% 
    THEP3Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E)21920.66
    95% 
    THEPDThermofilum pendens (strain Hrk 5)18760.54
    66% 
    THEPXThermoanaerobacter sp. (strain X514)23220.70
    94% 
    THERPThermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)28580.87
    61% 
    THESMThermococcus sibiricus (strain MM 739 / DSM 12597)20360.55
    84% 
    THESQThermotoga sp. (strain RQ2)18180.59
    99% 
    THET2Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)22010.67
    93% 
    THET8Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)22270.66
    90% 
    THETNThermoanaerobacter tengcongensis25330.76
    84% 
    THEVOThermoplasma volcanium15220.45
    86% 
    THICRThiomicrospira crunogena (strain XCL-2)21830.72
    80% 
    THIDAThiobacillus denitrificans (strain ATCC 25259)28260.89
    84% 
    THISHThioalkalivibrio sp. (strain HL-EbGR7)32721.00
    80% 
    TREDETreponema denticola27520.86
    57% 
    TREPATreponema pallidum10350.35
    96% 
    TREPSTreponema pallidum subsp. pallidum (strain SS14)10280.35
    96% 
    TRIADTrichoplax adhaerens114665.21
    61% 
    TRIEITrichodesmium erythraeum (strain IMS101)43271.52
    66% 
    TROW8Tropheryma whipplei (strain TW08/27) (Whipple's bacillus)7800.26
    95% 
    TROWTTropheryma whipplei (strain Twist) (Whipple's bacillus)8050.26
    92% 
    TRYBBTrypanosoma brucei67853.38
    53% 
    TUPGBTupaia belangeri (Tree shrew)153736.81
    92% 
    TURTRTursiops truncatus (Dolphin)164458.98
    98% 
    UNCMAUncultured methanogenic archaeon RC-I30690.89
    59% 
    UNCTGUncultured termite group 1 bacterium phylotype Rs-D177670.25
    83% 
    UREP2Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736)6090.23
    99% 
    UREPAUreaplasma parvum6140.23
    97% 
    UREU1Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western)6460.26
    89% 
    USTMAUstilago maydis65103.99
     48%
    VEREIVerminephrobacter eiseniae (strain EF01-2)49091.65
    81% 
    VESOHVesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA)9380.29
    95% 
    VIBC3Vibrio cholerae (strain ATCC 39541 / O395)37721.19
    92% 
    VIBCHVibrio cholerae37821.16
    91% 
    VIBCMVibrio cholerae serotype O1 (strain M66-2)36521.15
    93% 
    VIBF1Vibrio fischeri (strain ATCC 700601 / ES114)37891.23
    94% 
    VIBFMVibrio fischeri (strain MJ11)40341.30
    90% 
    VIBHBVibrio harveyi (strain ATCC BAA-1116 / BB120)55681.61
    78% 
    VIBPAVibrio parahaemolyticus48131.49
    88% 
    VIBSLVibrio splendidus (strain LGP32)44201.42
    87% 
    VIBVUVibrio vulnificus44631.44
    91% 
    VIBVYVibrio vulnificus (strain YJ016)49871.55
    85% 
    VITVIVitis vinifera (Grape)211427.96
    66% 
    WIGBRWigglesworthia glossinidia brevipalpis6110.20
    94% 
    WOLPMWolbachia pipientis wMel11590.33
    81% 
    WOLPPWolbachia pipientis subsp. Culex pipiens (strain wPip)12380.40
    78% 
    WOLSUWolinella succinogenes20240.65
    86% 
    WOLTRWolbachia sp. (subsp. Brugia malayi) (strain TRS)8040.24
    81% 
    WOLWRWolbachia sp. subsp. Drosophila simulans (strain wRi)10330.33
    94% 
    XANACXanthomonas axonopodis (pv. citri)43471.49
    90% 
    XANC5Xanthomonas campestris pv. vesicatoria (strain 85-10)46211.55
    87% 
    XANC8Xanthomonas campestris pv. campestris (strain 8004)42131.44
    98% 
    XANCBXanthomonas campestris pv. campestris (strain B100)44521.47
    91% 
    XANCPXanthomonas campestris pv. campestris41231.42
    98% 
    XANOMXanthomonas oryzae pv. oryzae (strain MAFF 311018)40361.30
    94% 
    XANOPXanthomonas oryzae pv. oryzae (strain PXO99A)45591.32
    82% 
    XANORXanthomonas oryzae (pv. oryzae)41521.37
    87% 
    XANP2Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)49691.62
    88% 
    XENTRXenopus tropicalis (Western clawed frog)209369.70
    71% 
    XYLCXXylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)33351.13
    79% 
    XYLF2Xylella fastidiosa (strain M23)21570.67
    93% 
    XYLFAXylella fastidiosa27730.74
    76% 
    XYLFMXylella fastidiosa (strain M12)20530.63
    92% 
    XYLFTXylella fastidiosa (strain Temecula1 / ATCC 700964)20030.65
    98% 
    YARLIYarrowia lipolytica66033.14
    61% 
    YEASTSaccharomyces cerevisiae (Baker's yeast)56952.83
    83% 
    YERE8Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081)41061.31
    93% 
    YERP3Yersinia pseudotuberculosis (serotype O:1b / strain IP 31758)43031.36
    90% 
    YERPAYersinia pestis (biovar Antiqua strain Antiqua)41291.30
    97% 
    YERPBYersinia pseudotuberculosis serotype IB (strain PB1/+)42131.32
    95% 
    YERPEYersinia pestis40061.28
    97% 
    YERPGYersinia pestis bv. Antiqua (strain Angola)38171.14
    91% 
    YERPNYersinia pestis (biovar Antiqua strain Nepal516)39371.25
    98% 
    YERPPYersinia pestis (strain Pestoides F)39371.26
    98% 
    YERPSYersinia pseudotuberculosis40931.34
    97% 
    YERPYYersinia pseudotuberculosis serotype O:3 (strain YPIII)41691.30
    93% 
    ZYMMOZymomonas mobilis20290.60
    72% 

    Last update: Fri Mar 5 00:05:18 2010
    Last change: Wed Mar 3 20:05:39 2010 (Metazoa Tree)
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