Status of the OMA Orthologs Project

This page displays the current status of the orthologs project that is currently under way in the Computational Biochemistry Research Group (CBRG) of the ETH Zürich and is automatically updated every hour. There are several other webpages related to the OMA project:
  • The project homepage
  • A webpage describing algorithm.
  • A webpage with timing statistics of the over 300 CPUs used.
  • A page with facts and figures about the over 5 billion alignments collected so far.
  • All trees are downloadable in the Newick tree format and you can explore the trees using the ATV tree viewer applet.
  • The OMA groups can be explored with the OMA Browser which can be found under omabrowser.org.


  • The latest matrices contain 1970 species: (go to list)

    1850 Species
    Mar 09
    948623 orthologous groups
    8.2 proteins per group
    139 Archaea
    Aug 19
    36153 orthologous groups
    7.6 proteins per group
    994 Bacteria
    Jan 19
    301207 orthologous groups
    9.6 proteins per group
    259 Eukaryota
    Aug 19
    589181 orthologous groups
    5.8 proteins per group
    351 Gammaproteobacteria
    Aug 19
    78533 orthologous groups
    15.3 proteins per group
    374 other Proteobacteria
    Aug 19
    125581 orthologous groups
    9.3 proteins per group
    79 Metazoa
    unknown
    163698 orthologous groups
    6.9 proteins per group
    329 Firmicutes
    Aug 19
    76594 orthologous groups
    11.1 proteins per group
    46 Cyanobacteria
    Aug 19
    17824 orthologous groups
    7.5 proteins per group
    40 Mammalia
    Mar 05
    60772 orthologous groups
    10.6 proteins per group
    174 Actinobacteria
    Aug 19
    75037 orthologous groups
    8.2 proteins per group
    298 other Bacteria
    Aug 19
    84202 orthologous groups
    6.8 proteins per group
    109 other Eukaryota
    Jul 02
    203150 orthologous groups
    4.7 proteins per group

    Currently in the all-against-all

    No information found.

    Recently added to the matrices

    Jul 18: CAPTE - Capitella teleta (Polychaete worm) [Opisthokonta - Metazoa]
    Jul 09: HAEI1 - Haemophilus influenzae (strain 10810) [Proteobacteria - Gammaproteobacteria]
    Jul 08: PROA4 - Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) [Actinobacteria - Actinobacteridae]

    Finished all-all, but missing in matrices

    120 Species
    600 Bacteria
    25 other Eukaryota
    49 Metazoa
    4 Mammalia: CHLSB, PAPAN, SHEEP, VICPA

    The Latest Trees

    Species trees can be constructed by several methods. We found that best trees according to biological classifications are the PAM distance trees, where the distances are determined by the average PAM distance between every pair of species. The optimal set of OMA groups from which the distance averages are calculated is based on the "dimensionless fitting index". This is a normalized measure of how well a set of distance estimates can be fit on a tree.

    Tree of Archaea

    Tree info: All Archaeal genomes, Wed Aug 19 09:31:17 2015, 139 species, 36153 orthologs, 68 top groups, 176 used here, Weighted, BestSubset
    DimlessQual: best: 1.0565, ave: 1.2893 +- 0.0061, var: 0.009558, Z=-2.381
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Archaea
    Color code:
    Halobacteria
    Methanomicrobia
    Sulfolobales
    Methanococci
    Thermoproteales
    Desulfurococcales
    Thermococci
    Methanobacteria
    Archaeoglobi
    Thermoplasmata
    Thaumarchaeota
    Acidilobales
    unclassified Euryarchaeota
    Nanohaloarchaeota
    Fervidicoccales
    unclassified Crenarchaeota
    Methanopyri
    Korarchaeota
    Nanoarchaeota


    Recently added:
    Dec 02: CREAS - Crenarchaeota archaeon SCGC AAA471-B05
    Dec 02: NANSJ - Candidatus Nanosalinarum sp. J07AB56
    Nov 25: NANS0 - Candidatus Nanosalina sp. J07AB43

    Tree of Bacteria

    Tree info: All Bacterial genomes, Wed Jun 27 01:46:01 2007, 340 species, 114863 orthologs, 943 used here, Arithmetic, BestDimless
    DimlessQual: best: 4.3995, ave: 4.997 +- 0.011, var: 0.03114, Z=-3.386
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Bacteria
    Color code:
    Proteobacteria
    Firmicutes
    Actinobacteria
    Cyanobacteria
    Spirochaetes
    Bacteroidetes
    Chlamydiae
    Chlorobi
    Deinococcus-Thermus
    Acidobacteria
    Chloroflexi
    Aquificae
    Fusobacteria
    Planctomycetes
    Thermotogales
    Eukaryota


    Recently added:
    Jun 18: YERPN - Yersinia pestis bv. Antiqua (strain Nepal516)
    Jun 17: VEREI - Verminephrobacter eiseniae (strain EF01-2)
    Jun 03: DESDG - Desulfovibrio desulfuricans (strain G20)

    Tree of Gammaproteobacteria

    Tree info: All Gammaproteobacteria, Fri Jun 28 16:11:43 2013, 286 species, 66260 orthologs, 80 top groups, 534 used here, Arithmetic, BestDimless
    DimlessQual: best: 0.2631, ave: 0.27310 +- 0.00054, var: 7.593e-05, Z=-1.148
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Gammaproteobacteria
    Color code:
    Enterobacteriales
    Alteromonadales
    Pseudomonas
    Pasteurellales
    Xanthomonadales
    Vibrionales
    Thiotrichales
    Acinetobacter
    Legionellales
    Chromatiales
    Oceanospirillales
    Aeromonadales
    Psychrobacter
    Methylococcales
    unclassified Gammaproteobacteria
    Acidithiobacillales
    Moraxella
    Azotobacter
    Cellvibrio
    Cardiobacteriales


    Recently added:
    Jan 19: METMM - Methylomonas methanica (strain MC09)
    Jan 18: CROTZ - Cronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032)
    Jan 16: PSEPB - Pseudomonas putida (strain BIRD-1)

    Tree of other Proteobacteria

    Tree info: Other Proteobacteria, Wed Jun 26 16:08:29 2013, 309 species, 107902 orthologs, 222 top groups, 542 used here, Arithmetic, BestSubset
    DimlessQual: best: 0.57805, ave: 0.7472 +- 0.0022, var: 0.001315, Z=-4.666
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of other Proteobacteria
    Color code:
    Rhizobiales
    Burkholderiales
    Deltaproteobacteria
    Rickettsiales
    Helicobacteraceae
    Rhodobacterales
    Campylobacteraceae
    Neisseriales
    Rhodospirillales
    Caulobacterales
    Sphingomonadales
    Methylophilales
    Rhodocyclales
    Nitrosomonadales
    unclassified Alphaproteobacteria
    unclassified Epsilonproteobacteria
    Nautiliales
    Hydrogenophilales
    Magnetococcales
    Parvularculales


    Recently added:
    Jan 20: DESAR - Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2)
    Jan 18: AZOL4 - Azospirillum lipoferum (strain 4B)
    Jan 18: ZYMMA - Zymomonas mobilis subsp. mobilis (strain ATCC 10988 / DSM 424 / LMG 404 / NCIMB 8938 / NRRL B-806 / ZM1)

    Tree of Firmicutes

    Tree info: All Firmicutes, Wed Aug 19 14:43:05 2015, 329 species, 76594 orthologs, 194 top groups, 615 used here, Arithmetic, BestDimless
    DimlessQual: best: 1.4767, ave: 1.5539 +- 0.0028, var: 0.002043, Z=-1.71
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Firmicutes
    Color code:
    Streptococcus
    Clostridiales
    Bacillaceae
    Lactobacillus
    Staphylococcaceae
    Thermoanaerobacterales
    Listeriaceae
    Lactococcus
    Paenibacillaceae
    Leuconostocaceae
    Enterococcaceae
    Halanaerobiales
    Alicyclobacillaceae
    Bacillales incertae sedis
    Negativicutes
    Pediococcus
    Natranaerobiales
    Planococcaceae
    Carnobacteriaceae
    Erysipelotrichia


    Recently added:
    Jul 08: LACGL - Lactococcus garvieae (strain Lg2)
    Jul 01: LISM4 - Listeria monocytogenes serotype 1/2a (strain 10403S)
    Jun 30: RUMA7 - Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7)

    Tree of Cyanobacteria

    Tree info: All Cyanobacteria, Wed Aug 19 09:31:15 2015, 46 species, 17824 orthologs, 1 top groups, 154 used here, Weighted, BestSubset
    DimlessQual: best: 2.6999, ave: 2.920 +- 0.013, var: 0.04523, Z=-1.035
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Cyanobacteria
    Color code:
    Chroococcales
    Prochlorales
    Nostoc
    Oscillatoriales
    Anabaena
    Trichormus
    Gloeobacteria
    Pleurocapsales


    Recently added:
    Jun 30: NOSS7 - Nostoc sp. (strain ATCC 29411 / PCC 7524)
    Apr 01: ATETH - Atelocyanobacterium thalassa (isolate ALOHA)
    Mar 16: HALP7 - Halothece sp. (strain PCC 7418)

    Tree of Actinobacteria

    Tree info: All Actinobacteria, Wed Aug 19 21:05:35 2015, 174 species, 75037 orthologs, 83 top groups, 377 used here, AveVarWeighted, BestSubset
    DimlessQual: best: 0.60385, ave: 0.6686 +- 0.0022, var: 0.001295, Z=-1.798
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Actinobacteria
    Color code:
    Corynebacterineae
    Micrococcineae
    Bifidobacterium
    Streptomycineae
    Propionibacterineae
    Pseudonocardineae
    Micromonosporineae
    Coriobacteridae
    Frankiaceae
    Streptosporangineae
    Geodermatophilaceae
    Gardnerella
    Actinomycineae
    Rubrobacteridae
    Acidothermaceae
    Nakamurellaceae
    Catenulisporineae
    Glycomycineae
    Kineosporiineae
    Acidimicrobidae


    Recently added:
    Jul 08: PROA4 - Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070)
    Jul 03: MYCA0 - Mycobacterium africanum (strain GM041182)
    Apr 30: MODMB - Modestobacter marinus (strain BC501)

    Tree of other Bacteria

    Tree info: Other Bacteria, Wed Jun 26 13:14:40 2013, 208 species, 60473 orthologs, 154 top groups, 299 used here, AveVarWeighted, BestSubset
    DimlessQual: best: 1.1765, ave: 1.646 +- 0.017, var: 0.07264, Z=-1.742
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of other Bacteria
    Color code:
    Bacteria


    Recently added:
    Jan 20: LEPII - Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain IPAV)
    Jan 20: NIAKG - Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10)
    Jan 20: TRES6 - Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091)

    Tree of Eukaryota

    Tree info: All Eukaryotal genomes, Wed Jun 26 16:08:37 2013, 198 species, 388412 orthologs, 148 top groups, 1998 used here, Arithmetic, BestSubset
    DimlessQual: best: 0.087843, ave: 0.13166 +- 0.00027, var: 1.919e-05, Z=-10
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Eukaryota
    Color code:
    Fungi
    Chordata
    Ecdysozoa
    Viridiplantae
    Euglenozoa
    Lophotrochozoa
    Alveolata
    Amoebozoa
    Echinodermata
    Acoelomata
    Cnidaria
    Placozoa
    Porifera
    Choanoflagellida
    Opisthokonta incertae sedis
    Cryptophyta
    Fornicata
    Haptophyceae
    Heterolobosea
    stramenopiles


    Recently added:
    Jan 20: ASPAC - Aspergillus aculeatus
    Jan 20: NEOFI - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
    Jan 20: PHAND - Phaeosphaeria nodorum (Glume blotch fungus)

    Tree of Metazoa

    Tree info: All Metazoa (max Length) (only 1 isoform used) (VPs consistent per genome-pair) , Sat Jan 7 16:03:00 2012, 79 species, 163698 orthologs, 26 top groups, 850 used here, Arithmetic, BestSubset
    DimlessQual: best: 0.032241, ave: 0.04851 +- 0.00015, var: 5.783e-06, Z=-6.767
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Metazoa
    Color code:
    Theria
    Protostomia
    Pseudocoelomata
    Actinopterygii
    Sauropsida
    Tunicata
    Prototheria
    Amphibia
    Cephalochordata
    Echinodermata
    Acoelomata
    Cnidaria
    Placozoa


    Recently added:
    Jul 06: NOMLE - Nomascus leucogenys (Northern white-cheeked gibbon)
    Oct 15: SARHA - Sarcophilus harrisii (Tasmanian devil)
    Oct 07: STRPU - Strongylocentrotus purpuratus (Purple sea urchin)

    Tree of Mammalia

    Tree info: All Mammalia (max Length) (only 1 isoform used) (VPs consistent per genome-pair) , Tue Mar 5 14:32:23 2013, 40 species, 60772 orthologs, 4 top groups, 610 used here, AveVarWeighted, BestSubset
    DimlessQual: best: 0.21602, ave: 0.3238 +- 0.0015, var: 0.0005966, Z=-4.414
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of Mammalia
    Color code:
    Laurasiatheria
    Haplorrhini
    Glires
    Afrotheria
    Metatheria
    Strepsirrhini
    Xenarthra
    Scandentia
    Prototheria


    Recently added:
    Nov 20: European domestic ferret - Mustela putorius furo
    Jul 06: Northern white-cheeked gibbon - Nomascus leucogenys
    Oct 15: Tasmanian devil - Sarcophilus harrisii

    Tree of other Eukaryota

    Tree info: Eukaryota excluding Metazoa (max Length) (only 1 isoform used) (VPs consistent per genome-pair) , Thu Jan 12 17:12:11 2012, 45 species, 92647 orthologs, 24 top groups, 489 used here, Arithmetic, BestSubset
    DimlessQual: best: 0.44355, ave: 0.8184 +- 0.0036, var: 0.003351, Z=-6.475
    Downloads: Unrooted tree (pdf), phylogram (pdf), Newick tree file, PhyloXML tree file or a Darwin script to plot your own tree.
    Tree of other Eukaryota
    Color code:
    Fungi
    Viridiplantae
    Euglenozoa
    Alveolata
    Amoebozoa
    Choanoflagellida
    Fornicata
    Haptophyceae
    Metazoa


    Recently added:
    Aug 15: CHLRE - Chlamydomonas reinhardtii
    Jun 23: MAIZE - Zea mays (Maize)
    Apr 14: PUCGT - Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) (Black rust)

    List of Species

    Click on a 5-letter code for more information about a particular species
    "Maa" stands for "million amino acids" and "Coverage" indicates the percentage of sequences which form part of some orthologous group.
    Scientific Name# Seqs Maa Coverage
    ACAM1Acaryochloris marina (strain MBIC 11017)81482.25
    52% 
    ACEAZAcetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288)22760.70
    89% 
    ACEP3Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153)28850.94
    82% 
    ACEWDAcetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655)34441.14
    81% 
    ACHLIAcholeplasma laidlawii (strain PG-8A)13800.45
    65% 
    ACHXAAchromobacter xylosoxidans (strain A8)67982.23
    89% 
    ACIACAcidovorax citrulli (strain AAC00-1)46011.56
    90% 
    ACIADAcinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)32951.05
    89% 
    ACIAPAcidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011)47181.64
    95% 
    ACIB1Acinetobacter baumannii (strain 1656-2)37431.14
    95% 
    ACIB3Acinetobacter baumannii (strain AB307-0294)34521.08
    96% 
    ACIB4Aciduliprofundum boonei (strain DSM 19572 / T469)15390.47
    90% 
    ACIB5Acinetobacter baumannii (strain AB0057)37321.14
    95% 
    ACIBCAcinetobacter baumannii (strain ACICU)37431.15
    96% 
    ACIBDAcinetobacter baumannii (strain TCDC-AB0715)38181.18
    97% 
    ACIBSAcinetobacter baumannii (strain SDF)32870.94
    81% 
    ACIBTAcinetobacter baumannii (strain ATCC 17978 / NCDC KC 755)33640.95
    87% 
    ACIBYAcinetobacter baumannii (strain AYE)37151.16
    96% 
    ACIC1Acidothermus cellulolyticus (strain ATCC 43068 / 11B)21570.73
    86% 
    ACIC5Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)33631.18
    80% 
    ACICJAcidiphilium cryptum (strain JF-5)35181.17
    92% 
    ACICPAcinetobacter calcoaceticus (strain PHEA-2)35981.12
    93% 
    ACICSAcidithiobacillus caldus (strain SM-1)30570.90
    68% 
    ACIETAcidovorax ebreus (strain TPSY)34601.12
    97% 
    ACIF2Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455)31190.88
    81% 
    ACIF5Acidithiobacillus ferrooxidans (strain ATCC 53993)27450.83
    92% 
    ACIFDAcidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP)19350.63
    69% 
    ACIFVAcidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4)20150.67
    82% 
    ACIHWAcidianus hospitalis (strain W1)23290.62
    87% 
    ACIMAAcidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301)38541.24
    91% 
    ACIS0Aciduliprofundum sp. (strain MAR08-339)14970.45
    90% 
    ACIS3Acidilobus saccharovorans (strain DSM 16705 / VKM B-2471 / 345-15)14990.45
    86% 
    ACISDAcinetobacter oleivorans (strain JCM 16667 / KCTC 23045 / DR1)38731.20
    94% 
    ACISJAcidovorax sp. (strain JS42)40421.30
    95% 
    ACTM4Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431)81122.64
    86% 
    ACTMDActinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)69112.39
    85% 
    ACTP2Actinobacillus pleuropneumoniae serotype 5b (strain L20)20020.65
    98% 
    ACTP7Actinobacillus pleuropneumoniae serotype 7 (strain AP76)21090.67
    96% 
    ACTPJActinobacillus pleuropneumoniae serotype 3 (strain JL03)20240.64
    97% 
    ACTS5Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110)82392.71
    81% 
    ACTSZActinobacillus succinogenes (strain ATCC 55618 / 130Z)20770.68
    96% 
    ACYPIAcyrthosiphon pisum (Pea aphid)3399210.59
     32%
    ADVKWAdvenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001)39331.01
    72% 
    AEDAEAedes aegypti (Yellow fever mosquito)151297.11
    81% 
    AEGTAAegilops tauschii (Tausch's goatgrass)3379513.56
    76% 
    AEQSUAequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3)31341.04
    88% 
    AERHHAeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240)41201.38
    96% 
    AERPEAeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)16990.49
    74% 
    AERS4Aeromonas salmonicida (strain A449)43021.34
    92% 
    AERVBAeromonas veronii (strain B565)40091.30
    94% 
    AGABIAgaricus bisporus (Common mushroom)103664.43
    70% 
    AGGADAggregatibacter actinomycetemcomitans serotype C (strain D11S-1)21260.61
    85% 
    AGGANAggregatibacter aphrophilus (strain NJ8700)22240.66
    85% 
    AGRRKAgrobacterium radiobacter (strain K84 / ATCC BAA-868)66752.11
    90% 
    AGRSHAgrobacterium sp. (strain H13-3)53281.64
    91% 
    AGRT5Agrobacterium tumefaciens (strain C58 / ATCC 33970)53471.66
    92% 
    AGRVSAgrobacterium vitis (strain S4 / ATCC BAA-846)53521.78
    90% 
    AILMEAiluropoda melanoleuca (Giant panda)1981610.45
    93% 
    AKKM8Akkermansia muciniphila (strain ATCC BAA-835)21370.77
    64% 
    ALBFTAlbidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118)44041.47
    89% 
    ALCBSAlcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573)27520.91
    93% 
    ALCDBAlcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5)43881.46
    85% 
    ALIADAlicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A)30590.93
    86% 
    ALIATAlicyclobacillus acidocaldarius (strain Tc-4-1)31650.91
    83% 
    ALIDKAlicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601)46191.50
    94% 
    ALIFIAlistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999)30531.06
    69% 
    ALISLAliivibrio salmonicida (strain LFI1238)37961.22
    92% 
    ALKEHAlkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1)28620.98
    88% 
    ALKMQAlkaliphilus metalliredigens (strain QYMF)44631.32
    82% 
    ALKOOAlkaliphilus oremlandii (strain OhILAs)28280.87
    91% 
    ALTMBAlteromonas macleodii (strain Balearic Sea AD45)39481.35
    95% 
    ALTMDAlteromonas macleodii (strain DSM 17117 / Deep ecotype)40461.26
    85% 
    ALTMEAlteromonas macleodii (strain English Channel 673)38761.34
    96% 
    ALTMSAlteromonas macleodii (strain Black Sea 11)37511.29
    96% 
    ALTSSAlteromonas sp. (strain SN2)43381.42
    85% 
    AMBTCAmborella trichopoda272718.57
    53% 
    AMICLAminobacterium colombiense (strain DSM 12261 / ALA-1)18720.60
    86% 
    AMOA5Amoebophilus asiaticus (strain 5a2)12410.47
    58% 
    AMPQEAmphimedon queenslandica2846411.41
     38%
    AMPXNAmphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01)23830.71
    86% 
    AMYMSAmycolatopsis mediterranei (strain S699)101913.29
    94% 
    AMYMUAmycolatopsis mediterranei (strain U-32)92033.03
    100% 
    AMYSDAmycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1)47031.47
    82% 
    ANAD2Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258)44601.50
    95% 
    ANADEAnaeromyxobacter dehalogenans (strain 2CP-C)43441.52
    95% 
    ANADFAnaeromyxobacter sp. (strain Fw109-5)44611.58
    87% 
    ANAMDAnaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA)20030.65
    88% 
    ANAMFAnaplasma marginale (strain Florida)9360.34
    98% 
    ANAMMAnaplasma marginale (strain St. Maries)9430.34
    97% 
    ANAPDAnaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1)17950.59
    80% 
    ANAPLAnas platyrhynchos (Domestic duck)157537.91
    89% 
    ANAPZAnaplasma phagocytophilum (strain HZ)13230.35
    54% 
    ANASKAnaeromyxobacter sp. (strain K)44441.52
    96% 
    ANATUAnaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1)31201.07
    72% 
    ANAVTAnabaena variabilis (strain ATCC 29413 / PCC 7937)56281.91
    91% 
    ANOCAAnolis carolinensis (Green anole)180299.18
    89% 
    ANODAAnopheles darlingi (Mosquito)104416.03
    82% 
    ANOFWAnoxybacillus flavithermus (strain DSM 21510 / WK1)28170.83
    91% 
    ANOGAAnopheles gambiae (African malaria mosquito)124995.95
    82% 
    APIMEApis mellifera (Honeybee)103785.61
    83% 
    AQUAEAquifex aeolicus (strain VF5)15520.49
    88% 
    ARALYArabidopsis lyrata (Lyre-leaved rock-cress)3208511.69
    77% 
    ARATHArabidopsis thaliana (Mouse-ear cress)2748911.12
    89% 
    ARCB4Arcobacter butzleri (strain RM4018)22540.72
    88% 
    ARCFUArchaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)24000.66
    79% 
    ARCHDArcanobacterium haemolyticum (strain ATCC 9345 / DSM 20595 / NBRC 15585 / NCTC 8452 / 11018)17170.57
    80% 
    ARCNCArcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI)31250.99
    85% 
    ARCPAArchaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18)18180.48
    77% 
    ARCVSArchaeoglobus veneficus (strain DSM 11195 / SNP6)20640.56
    82% 
    AROAEAromatoleum aromaticum (strain EbN1)44831.39
    77% 
    ARTARArthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117)33801.06
    82% 
    ARTATArthrobacter aurescens (strain TC1)45611.51
    88% 
    ARTCAArthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360)45861.47
    86% 
    ARTPPArthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3)40761.32
    93% 
    ARTS2Arthrobacter sp. (strain FB24)44531.49
    92% 
    ARTSSArthromitus sp. (strain SFB-mouse-Japan)15090.48
    73% 
    ASHGOAshbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (Yeast)47572.33
    87% 
    ASPACAspergillus aculeatus108195.35
    85% 
    ASPCLAspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)91214.50
    91% 
    ASPFNAspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167)134875.67
    82% 
    ASPFUNeosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)96304.74
    91% 
    ASPORAspergillus oryzae (strain ATCC 42149 / RIB 40) (Yellow koji mold)120085.43
    88% 
    ASPTNAspergillus terreus (strain NIH 2624 / FGSC A1156)104045.19
    83% 
    ASTECAsticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48)37431.25
    80% 
    ASTMXAstyanax mexicanus (Blind cave fish)2307912.22
    86% 
    ATETHAtelocyanobacterium thalassa (isolate ALOHA)11990.39
    93% 
    ATOPDAtopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546)13530.46
    83% 
    ATTCEAtta cephalotes (Leafcutter ant)177666.33
    58% 
    AURDEAuricularia delicata (strain TFB10046) (White-rot fungus)234409.06
     43%
    AURPUAureobasidium pullulans (Black yeast)108084.88
    73% 
    AYWBPAster yellows witches'-broom phytoplasma (strain AYWB)6810.18
    70% 
    AZOC5Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)47061.60
    91% 
    AZOL4Azospirillum lipoferum (strain 4B)61742.00
    79% 
    AZOPCAzobacteroides pseudotrichonymphae genomovar. CFP28470.29
    83% 
    AZOSBAzoarcus sp. (strain BH72)39801.33
    92% 
    AZOVDAzotobacter vinelandii (strain DJ / ATCC BAA-1303)49851.52
    80% 
    BACA1Bacillus atrophaeus (strain 1942)41861.20
    89% 
    BACA2Bacillus amyloliquefaciens (strain FZB42)36911.15
    95% 
    BACAABacillus anthracis (strain A0248)52911.42
    95% 
    BACACBacillus anthracis (strain CDC 684 / NRRL 3495)58941.53
    91% 
    BACAHBacillus thuringiensis (strain Al Hakam)47921.46
    98% 
    BACAIBacillus cereus var. anthracis (strain CI)55201.52
    95% 
    BACANBacillus anthracis54881.44
    94% 
    BACASBacillus amyloliquefaciens (strain ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393)39011.15
    92% 
    BACC0Bacillus cereus (strain AH820)57981.56
    92% 
    BACC1Bacillus cereus (strain ATCC 10987)58261.53
    88% 
    BACC2Bacillus cereus (strain G9842)58441.59
    88% 
    BACC3Bacillus cereus (strain 03BB102)55961.51
    93% 
    BACC4Bacillus cereus (strain B4264)53941.51
    94% 
    BACC6Bacillus coagulans (strain 2-6)29390.81
    80% 
    BACC7Bacillus cereus (strain AH187)57571.55
    92% 
    BACCJBacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4)42511.24
    81% 
    BACCNBacillus cereus subsp. cytotoxis (strain NVH 391-98)38391.08
    92% 
    BACCQBacillus cereus (strain Q1)54581.52
    93% 
    BACCRBacillus cereus (strain ATCC 14579 / DSM 31)52401.45
    94% 
    BACCZBacillus cereus (strain ZK / E33L)56371.60
    96% 
    BACF6Bacteroides fragilis (strain 638R)43181.59
    94% 
    BACFNBacteroides fragilis (strain ATCC 25285 / NCTC 9343)43051.55
    93% 
    BACFRBacteroides fragilis (strain YCH46)46091.59
    89% 
    BACHDBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)40021.17
    86% 
    BACHKBacillus thuringiensis subsp. konkukian (strain 97-27)51671.47
    98% 
    BACIEBacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10)32311.03
    85% 
    BACLDBacillus licheniformis (strain DSM 13 / ATCC 14580)43891.26
    89% 
    BACMDBacillus megaterium (strain DSM 319)51241.40
    93% 
    BACMQBacillus megaterium (strain ATCC 12872 / QMB1551)56221.50
    90% 
    BACMSBacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ)32481.07
    53% 
    BACP2Bacillus pumilus (strain SAFR-032)36741.07
    90% 
    BACPTBacillus subtilis subsp. spizizenii (strain TU-B-10)42261.19
    90% 
    BACPZBacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23)40541.18
    93% 
    BACSHBacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78)36071.23
    78% 
    BACSKBacillus clausii (strain KSM-K16)41021.23
    88% 
    BACSTBacillus subtilis (strain BSn5)41441.19
    94% 
    BACSUBacillus subtilis (strain 168)42541.24
    93% 
    BACT0Bacillus thuringiensis subsp. finitimus (strain YBT-020)57381.57
    91% 
    BACT1Bacillus thuringiensis (strain BMB171)53241.50
    91% 
    BACT6Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108)32401.18
    86% 
    BACTNBacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)47711.86
    82% 
    BACV8Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154)39801.49
    84% 
    BACWKBacillus weihenstephanensis (strain KBAB4)56501.59
    93% 
    BARBKBartonella bacilliformis (strain ATCC 35685 / KC583)12510.38
    85% 
    BARC7Bartonella clarridgeiae (strain CIP 104772 / 73)13630.41
    82% 
    BARGABartonella grahamii (strain as4aup)17050.56
    93% 
    BARHEBartonella henselae (strain ATCC 49882 / Houston 1)15800.48
    87% 
    BARQUBartonella quintana (strain Toulouse)13010.41
    87% 
    BART1Bartonella tribocorum (strain CIP 105476 / IBS 506)19520.60
    86% 
    BARVWBartonella vinsonii subsp. berkhoffii (strain Winnie)14230.45
    96% 
    BATDEBatrachochytrium dendrobatidis (Frog chytrid fungus)86023.90
    100% 
    BATDJBatrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) (Frog chytrid fungus)86023.90
    100% 
    BAUCHBaumannia cicadellinicola subsp. Homalodisca coagulata5950.19
    97% 
    BDEBABdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)35831.17
    54% 
    BEII9Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)37741.21
    85% 
    BELBDBelliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134)36061.18
    85% 
    BEUC1Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432)41951.43
    87% 
    BIFA0Bifidobacterium animalis subsp. lactis (strain AD011)15250.54
    96% 
    BIFAABifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a)16270.60
    87% 
    BIFABBifidobacterium animalis subsp. lactis (strain BB-12)16400.58
    89% 
    BIFAPBifidobacterium asteroides (strain PRL2011)16560.63
    84% 
    BIFARBifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM 20104 / JCM 1190 / R101-8)15340.55
    92% 
    BIFASBifidobacterium animalis subsp. lactis (strain DSM 10140 / JCM 10602 / LMG 18314)15650.55
    98% 
    BIFAVBifidobacterium animalis subsp. lactis (strain V9)15690.55
    98% 
    BIFBABifidobacterium breve (strain ACS-071-V-Sch8b)18210.64
    90% 
    BIFBPBifidobacterium bifidum (strain PRL2010)17060.62
    92% 
    BIFBSBifidobacterium bifidum (strain S17)17830.62
    88% 
    BIFDBBifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1)21190.75
    82% 
    BIFL1Bifidobacterium longum subsp. infantis (strain 157F)19720.68
    91% 
    BIFL2Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b)19060.68
    93% 
    BIFLBBifidobacterium animalis subsp. lactis (strain Bl-04 / DGCC2908 / RB 4825 / SD5219)15660.55
    98% 
    BIFLDBifidobacterium longum (strain DJO10A)19770.68
    91% 
    BIFLJBifidobacterium longum subsp. longum (strain JDM301)19440.70
    92% 
    BIFLMBifidobacterium longum subsp. longum (strain BBMN68)17950.63
    93% 
    BIFLOBifidobacterium longum (strain NCC 2705)17230.64
    92% 
    BIFLSBifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12)28280.88
    77% 
    BLASBBlattabacterium sp. subsp. Blattella germanica (strain Bge)5870.20
    97% 
    BLASDBlastococcus saxobsidens (strain DD2)48141.46
    83% 
    BLASPBlattabacterium sp. subsp. Periplaneta americana (strain BPLAN)5820.20
    98% 
    BLOFLBlochmannia floridanus5890.20
    97% 
    BLOPBBlochmannia pennsylvanicus (strain BPEN)6100.20
    98% 
    BLOVBBlochmannia vafer (strain BVAF)5870.20
    98% 
    BOMMOBombyx mori (Silkworm)145775.94
    69% 
    BORA1Bordetella avium (strain 197N)34111.12
    90% 
    BORAPBorrelia afzelii (strain PKo)12610.36
    84% 
    BORBMBordetella bronchiseptica (strain MO149)46551.55
    99% 
    BORBNBorrelia burgdorferi (strain N40)12330.38
    97% 
    BORBRBordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)49721.63
    98% 
    BORBUBorrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680)15560.42
    81% 
    BORBZBorrelia burgdorferi (strain ZS7)12230.37
    95% 
    BORCABorrelia crocidurae (strain Achema)14680.41
    76% 
    BORDLBorrelia duttonii (strain Ly)12850.42
    95% 
    BORGABorrelia garinii (strain PBi)12680.36
    83% 
    BORHDBorrelia hermsii (strain HS1 / DAH)8190.29
    99% 
    BORP1Bordetella pertussis (strain ATCC 9797 / DSM 5571 / NCTC 10739 / 18323)35271.16
    99% 
    BORPABordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)43691.45
    99% 
    BORPCBordetella pertussis (strain CS)32741.07
    100% 
    BORPDBordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)49311.57
    91% 
    BORPEBordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)35871.18
    99% 
    BORRABorrelia recurrentis (strain A1)9770.33
    98% 
    BORT9Borrelia turicatae (strain 91E135)8180.29
    100% 
    BOTFBBotryotinia fuckeliana (strain B05.10)162995.47
    53% 
    BOVINBos taurus (Bovine)2031010.85
    95% 
    BRADIBrachypodium distachyon (Purple false brome)2667911.37
    88% 
    BRAFDBrachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860)30621.07
    85% 
    BRAFLBranchiostoma floridae (Lancelet)2846413.24
    54% 
    BRAHWBrachyspira hyodysenteriae (strain ATCC 49526 / WA1)26420.88
    92% 
    BRAIPBrachyspira intermedia (strain ATCC 51140 / PWS/A)28720.93
    87% 
    BRAJABradyrhizobium japonicum (strain USDA 110)82512.62
    82% 
    BRAM5Brachyspira murdochii (strain ATCC 51284 / DSM 12563 / 56-150)27500.91
    91% 
    BRAOLBrassica oleracea (Wild cabbage)5782020.27
    57% 
    BRAP9Brachyspira pilosicoli (strain ATCC BAA-1826 / 95/1000)23010.76
    93% 
    BRASBBradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)75612.40
    90% 
    BRASOBradyrhizobium sp. (strain ORS278)67342.12
    90% 
    BREBNBrevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599)58871.81
    77% 
    BRESCBrevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81)33261.04
    83% 
    BRUA1Brucella abortus (strain S19)29890.91
    96% 
    BRUA2Brucella abortus (strain 2308)33370.95
    93% 
    BRUABBrucella abortus biovar 1 (strain 9-941)30750.89
    95% 
    BRUC2Brucella canis (strain ATCC 23365 / NCTC 10854)32350.93
    95% 
    BRUM5Brucella melitensis (strain M5-90)33440.94
    88% 
    BRUMABrugia malayi (Filarial nematode worm)143124.79
    61% 
    BRUMBBrucella melitensis biotype 2 (strain ATCC 23457)31200.90
    96% 
    BRUMCBrucella microti (strain CCM 4915)32690.96
    96% 
    BRUMEBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)31790.95
    96% 
    BRUO2Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)28190.85
    95% 
    BRUSIBrucella suis (strain ATCC 23445 / NCTC 10510)32130.92
    95% 
    BRUSUBrucella suis biovar 1 (strain 1330)32700.93
    94% 
    BUCA0Buchnera aphidicola subsp. Acyrthosiphon pisum (strain LL01)5770.17
    95% 
    BUCA5Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A)5550.18
    100% 
    BUCAFBuchnera aphidicola subsp. Acyrthosiphon pisum (strain JF99)5900.18
    96% 
    BUCAIBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)5710.19
    99% 
    BUCAJBuchnera aphidicola subsp. Acyrthosiphon pisum (strain JF98)4770.12
    91% 
    BUCAPBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)5600.18
    98% 
    BUCATBuchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7)5530.18
    100% 
    BUCBPBuchnera aphidicola subsp. Baizongia pistaciae (strain Bp)5070.17
    97% 
    BUCCCBuchnera aphidicola subsp. Cinara cedri (strain Cc)3650.12
    91% 
    BURA4Burkholderia ambifaria (strain MC40-6)66892.19
    95% 
    BURCABurkholderia cenocepacia (strain AU 1054)64502.09
    99% 
    BURCCBurkholderia cenocepacia (strain MC0-3)69842.29
    97% 
    BURCHBurkholderia cenocepacia (strain HI2424)68972.23
    98% 
    BURCJBurkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)71202.31
    96% 
    BURCMBurkholderia ambifaria (strain ATCC BAA-244 / AMMD)66072.18
    96% 
    BURGBBurkholderia glumae (strain BGR1)56561.93
    93% 
    BURGSBurkholderia gladioli (strain BSR3)73492.53
    93% 
    BURM1Burkholderia multivorans (strain ATCC 17616 / 249)61892.00
    94% 
    BURM7Burkholderia mallei (strain NCTC 10247)56171.63
    91% 
    BURM9Burkholderia mallei (strain NCTC 10229)53081.60
    92% 
    BURMABurkholderia mallei (strain ATCC 23344)47971.51
    90% 
    BURMSBurkholderia mallei (strain SAVP1)49751.47
    91% 
    BURP0Burkholderia pseudomallei (strain 1106a)71462.07
    85% 
    BURP1Burkholderia pseudomallei (strain 1710b)63242.45
    85% 
    BURP6Burkholderia pseudomallei (strain 668)72142.07
    84% 
    BURP8Burkholderia phymatum (strain DSM 17167 / STM815)74612.42
    89% 
    BURPPBurkholderia phytofirmans (strain DSM 17436 / PsJN)71972.32
    93% 
    BURPSBurkholderia pseudomallei (strain K96243)58382.01
    97% 
    BURRHBurkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454)38581.11
    61% 
    BURS3Burkholderia sp. (strain 383)77152.52
    93% 
    BURSCBurkholderia sp. (strain CCGE1002)68652.19
    91% 
    BURSGBurkholderia sp. (strain CCGE1003)59832.00
    95% 
    BURTABurkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)55251.92
    92% 
    BURVGBurkholderia vietnamiensis (strain G4 / LMG 22486)74012.32
    86% 
    BURXLBurkholderia xenovorans (strain LB400)85892.75
    87% 
    BUTPBButyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316)37991.30
    65% 
    CAEBECaenorhabditis brenneri253859.69
    61% 
    CAEBRCaenorhabditis briggsae216108.62
    71% 
    CAEELCaenorhabditis elegans208008.52
    76% 
    CAEJACaenorhabditis japonica (Nematode)189717.37
    65% 
    CAERECaenorhabditis remanei3109612.57
    62% 
    CALASCaldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1)40951.49
    74% 
    CALBDCaldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320)26480.83
    92% 
    CALEACaldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01)15640.48
    69% 
    CALH1Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108)25210.81
    95% 
    CALJACallithrix jacchus (White-tufted-ear marmoset)2399811.78
    81% 
    CALK2Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002)24600.82
    96% 
    CALKICaldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 / I77R1B)24620.78
    93% 
    CALLDCaldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154)14770.44
    91% 
    CALMQCaldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167)19620.60
    82% 
    CALNYCalditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1)20890.68
    91% 
    CALOOCaldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47)21840.72
    97% 
    CALOWCaldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL)21320.69
    96% 
    CALS8Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903)26190.83
    91% 
    CAMC1Campylobacter concisus (strain 13826)20600.62
    81% 
    CAMC5Campylobacter curvus (strain 525.92)19280.57
    84% 
    CAMFFCampylobacter fetus subsp. fetus (strain 82-40)17150.53
    88% 
    CAMHCCampylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A)16870.48
    72% 
    CAMJ8Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828)16220.51
    98% 
    CAMJCCampylobacter jejuni subsp. jejuni serotype HS:41 (strain ICDCCJ07001)15300.48
    93% 
    CAMJDCampylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97)17100.50
    88% 
    CAMJECampylobacter jejuni subsp. jejuni serotype O:2 (strain NCTC 11168)16420.52
    97% 
    CAMJICampylobacter jejuni subsp. jejuni (strain IA3902)16650.51
    98% 
    CAMJJCampylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176)17470.53
    95% 
    CAMJMCampylobacter jejuni subsp. jejuni serotype HS21 (strain M1 / 99/308)16170.50
    97% 
    CAMJRCampylobacter jejuni (strain RM1221)18360.54
    92% 
    CAMJSCampylobacter jejuni subsp. jejuni (strain S3)18130.54
    94% 
    CAMLRCampylobacter lari (strain RM2100 / D67 / ATCC BAA-1060)15450.49
    92% 
    CANAWCandida albicans (strain WO-1)56952.74
    86% 
    CANFACanis familiaris (Dog)2061011.16
    90% 
    CANGACandida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (Yeast)47522.42
    86% 
    CANTECandida tenuis (Yeast)55262.46
    85% 
    CAPCCCapnocytophaga canimorsus (strain 5)23940.75
    76% 
    CAPI1Capitella sp. 13156211.37
    99% 
    CAPO3Capsaspora owczarzaki (strain ATCC 30864)83625.22
    54% 
    CAPODCapnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845)21700.75
    81% 
    CAPTECapitella teleta (Polychaete worm)3132511.31
    100% 
    CARHZCarboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008)26150.72
    77% 
    CARRPCarsonella ruddii (strain PV)1820.05
     46%
    CARS1Carnobacterium sp. (strain 17-4)24740.75
    87% 
    CATADCatenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897)89083.09
    77% 
    CAUCNCaulobacter crescentus (strain NA1000 / CB15N)38521.22
    95% 
    CAUCRCaulobacter crescentus (strain ATCC 19089 / CB15)37141.20
    95% 
    CAUSKCaulobacter sp. (strain K31)53711.71
    87% 
    CAUSTCaulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059)41361.35
    92% 
    CAVPOCavia porcellus (Guinea pig)1894010.00
    93% 
    CELADCellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630)41141.41
    86% 
    CELFACellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547)37601.27
    91% 
    CELFNCellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134)36731.23
    88% 
    CELGACellvibrio gilvus (strain ATCC 13127 / NRRL B-14078)31521.07
    90% 
    CELJUCellvibrio japonicus (strain Ueda107)37121.37
    81% 
    CELLCCellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20)32801.14
    92% 
    CENSYCenarchaeum symbiosum (strain A)20130.62
    60% 
    CHESBChelativorans sp. (strain BNC1)45301.45
    87% 
    CHICKGallus gallus (Chicken)155048.63
    92% 
    CHIPDChitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034)71792.68
    77% 
    CHLAAChloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)38501.41
    99% 
    CHLABChlamydophila abortus (strain DSM 27085 / S26/3)9600.34
    98% 
    CHLADChloroflexus aggregans (strain MD-66 / DSM 9485)37251.35
    92% 
    CHLCHChlorobium chlorochromatii (strain CaD3)19910.75
    89% 
    CHLCVChlamydophila caviae (strain GPIC)10050.35
    94% 
    CHLFFChlamydophila felis (strain Fe/C-56)10130.36
    95% 
    CHLL2Chlorobium limicola (strain DSM 245 / NBRC 103803)24190.79
    90% 
    CHLMUChlamydia muridarum (strain MoPn / Nigg)9110.32
    93% 
    CHLP1Chlamydophila psittaci (strain RD1)9670.35
    100% 
    CHLP6Chlamydophila psittaci (strain ATCC VR-125 / 6BC)9750.35
    97% 
    CHLP8Chlorobaculum parvum (strain NCIB 8327)20440.66
    94% 
    CHLPBChlorobium phaeobacteroides (strain BS1)24340.74
    87% 
    CHLPDChlorobium phaeobacteroides (strain DSM 266)25790.85
    87% 
    CHLPEChlamydophila pecorum (strain ATCC VR-628 / E58)9880.34
    86% 
    CHLPNChlamydia pneumoniae10510.36
    91% 
    CHLPPChlamydophila pneumoniae (strain LPCoLN)11050.37
    88% 
    CHLREChlamydomonas reinhardtii1690012.13
     34%
    CHLSBChlorocebus sabaeus (Green monkey)1917210.42
    98% 
    CHLSYChloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl)41531.43
    92% 
    CHLT0Chlamydia trachomatis serovar G (strain G/11222)9270.31
    97% 
    CHLT1Chlamydia trachomatis serovar E (strain E/11023)9260.31
    97% 
    CHLT2Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B)8980.31
    99% 
    CHLT3Chloroherpeton thalassium (strain ATCC 35110 / GB-78)27080.95
    79% 
    CHLT4Chlamydia trachomatis serovar A (strain A2497)10530.34
    89% 
    CHLT5Chlamydia trachomatis serovar E (strain E/150)9270.31
    97% 
    CHLT7Chlamydia trachomatis serovar G (strain G/9768)9200.31
    97% 
    CHLT9Chlamydia trachomatis serovar G (strain G/9301)9210.31
    97% 
    CHLTAChlamydia trachomatis serovar A (strain HAR-13 / ATCC VR-571B)9190.32
    98% 
    CHLTBChlamydia trachomatis serovar L2b (strain UCH-1/proctitis)8970.31
    99% 
    CHLTCChlamydia trachomatis (strain L2c)9540.31
    91% 
    CHLTDChlamydia trachomatis serovar D (strain D-EC)8780.31
    100% 
    CHLTEChlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS)22510.63
    79% 
    CHLTFChloracidobacterium thermophilum (strain B)30521.10
    66% 
    CHLTGChlamydia trachomatis serovar G (strain G/11074)9190.31
    97% 
    CHLTJChlamydia trachomatis serovar B (strain Jali20/OT)9000.32
    99% 
    CHLTLChlamydia trachomatis serovar D (strain D-LC)8780.31
    100% 
    CHLTRChlamydia trachomatis (strain D/UW-3/Cx)8950.31
    99% 
    CHLTSChlamydia trachomatis serovar E (strain Sweden2)8970.31
    99% 
    CHLTZChlamydia trachomatis serovar B (strain TZ1A828/OT)9020.32
    99% 
    CHOHOCholoepus hoffmanni (Hoffmann's two-fingered sloth)123295.44
    91% 
    CHRSDChromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768)32981.10
    91% 
    CHRVOChromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)44001.40
    79% 
    CIOINCiona intestinalis (Transparent sea squirt)165005.40
    57% 
    CIOSACiona savignyi (Pacific transparent sea squirt)139365.29
    57% 
    CITK8Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)50171.44
    83% 
    CITRICitrobacter rodentium (strain ICC168)49611.55
    92% 
    CLAM3Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)31071.01
    93% 
    CLAMSClavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1)31661.00
    88% 
    CLOA9Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a)28380.85
    86% 
    CLOABClostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)38491.18
    99% 
    CLOAEClostridium acetobutylicum (strain EA 2018)39121.19
    98% 
    CLOAICloacamonas acidaminovorans (strain Evry)18120.65
    63% 
    CLOB0Clostridium botulinum (strain H04402 065 / Type A5)36881.05
    90% 
    CLOB1Clostridium botulinum (strain ATCC 19397 / Type A)35471.04
    95% 
    CLOB2Clostridium botulinum (strain 230613 / Type F)35250.98
    94% 
    CLOB3Clostridiales genomosp. BVAB3 (strain UPII9-5)15660.54
    67% 
    CLOB6Clostridium botulinum (strain 657 / Type Ba4)39771.13
    92% 
    CLOB8Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)50031.58
    87% 
    CLOBAClostridium botulinum (strain Alaska E43 / Type E3)32531.00
    92% 
    CLOBBClostridium botulinum (strain Eklund 17B / Type B)35251.05
    88% 
    CLOBHClostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)36691.06
    95% 
    CLOBJClostridium botulinum (strain Kyoto / Type A2)38601.12
    93% 
    CLOBKClostridium botulinum (strain Okra / Type B1)38501.10
    93% 
    CLOBLClostridium botulinum (strain Langeland / NCTC 10281 / Type F)36331.07
    96% 
    CLOBMClostridium botulinum (strain Loch Maree / Type A3)39821.15
    91% 
    CLOC7Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B)42091.43
    79% 
    CLOCDClostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45)37711.26
    81% 
    CLOCEClostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10)32861.14
    80% 
    CLOK5Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)38231.11
    82% 
    CLOLDClostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC)41491.29
    88% 
    CLONNClostridium novyi (strain NT)23050.73
    87% 
    CLOP1Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A)28730.90
    94% 
    CLOPEClostridium perfringens (strain 13 / Type A)27220.86
    95% 
    CLOPHClostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)38891.31
    80% 
    CLOPSClostridium perfringens (strain SM101 / Type A)25660.79
    93% 
    CLOSDClostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654)25720.81
    84% 
    CLOSSClostridium sp. (strain SY8519)25980.83
    76% 
    CLOSWClostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1)41321.34
    82% 
    CLOTEClostridium tetani (strain Massachusetts / E88)24140.81
    90% 
    CLOTHClostridium thermocellum (strain ATCC 27405 / DSM 1237)31021.04
    94% 
    CLOTLClostridium thermocellum (strain DSM 1313 / LMG 6656 / LQ8)28810.97
    95% 
    COCLUCochliobolus lunatus (Filamentous fungus)121295.37
    78% 
    COLFTCollimonas fungivorans (strain Ter331)44281.53
    88% 
    COLP3Colwellia psychrerythraea (strain 34H / ATCC BAA-681)48811.51
    76% 
    COMT2Comamonas testosteroni (strain CNB-2)47771.54
    87% 
    CONPWConiophora puteana (strain RWD-64-598) (Brown rot fungus)137276.00
    64% 
    CONWIConexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)59121.99
    68% 
    COPCICoprinopsis cinerea (Inky cap fungus)1892110.58
    55% 
    COPPDCoprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT)14810.44
    65% 
    CORA7Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1)25040.81
    84% 
    CORADCoraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865)31091.12
    65% 
    CORCMCorallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2)80173.07
    85% 
    CORD2Corynebacterium diphtheriae (strain 241)22270.70
    96% 
    CORD3Corynebacterium diphtheriae (strain 31A)23450.72
    93% 
    CORD7Corynebacterium diphtheriae (strain ATCC 27012 / C7 (beta))23250.73
    93% 
    CORDDCorynebacterium diphtheriae (strain CDCE 8392)22430.71
    95% 
    CORDHCorynebacterium diphtheriae (strain HC01)22290.71
    96% 
    CORDICorynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis)23110.74
    93% 
    CORDJCorynebacterium diphtheriae (strain HC02)22160.72
    97% 
    CORDKCorynebacterium diphtheriae (strain HC03)22380.72
    96% 
    CORDLCorynebacterium diphtheriae (strain HC04)22170.71
    96% 
    CORDVCorynebacterium diphtheriae (strain VA01)21780.70
    96% 
    CORDWCorynebacterium diphtheriae (strain PW8)22630.71
    94% 
    COREFCorynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)29430.96
    84% 
    CORGBCorynebacterium glutamicum (strain R)30760.96
    90% 
    CORGKCorynebacterium glutamicum (strain ATCC 13032 / K051)29830.95
    99% 
    CORGLCorynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)30920.96
    96% 
    CORGPCoriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2)17680.61
    76% 
    CORJKCorynebacterium jeikeium (strain K411)20550.72
    92% 
    CORK4Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717)20180.71
    81% 
    CORP1Corynebacterium pseudotuberculosis (strain 1002)20900.66
    96% 
    CORP2Corynebacterium pseudotuberculosis (strain C231)20530.66
    97% 
    CORP9Corynebacterium pseudotuberculosis (strain I19)20940.66
    96% 
    CORPFCorynebacterium pseudotuberculosis (strain FRC41)21100.68
    95% 
    CORRGCorynebacterium resistens (strain DSM 45100 / JCM 12819 / GTC 2026)21370.75
    88% 
    CORU7Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109)20090.70
    87% 
    CORUBCorynebacterium ulcerans (strain BR-AD22)23370.76
    91% 
    CORVDCorynebacterium variabile (strain DSM 44702 / JCM 12073 / NCIMB 30131)29670.98
    81% 
    COXB1Coxiella burnetii (strain CbuK_Q154)19100.53
    88% 
    COXB2Coxiella burnetii (strain CbuG_Q212)18260.51
    88% 
    COXBNCoxiella burnetii (strain Dugway 5J108-111)21100.62
    84% 
    COXBRCoxiella burnetii (strain RSA 331 / Henzerling II)18890.51
    84% 
    COXBUCoxiella burnetii (strain RSA 493 / Nine Mile phase I)18140.51
    90% 
    CRAGICrassostrea gigas (Pacific oyster)2584911.63
     43%
    CREASCrenarchaeota archaeon SCGC AAA471-B0514130.41
    67% 
    CROAHCroceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090)27010.91
    90% 
    CROS8Cronobacter sakazakii (strain ATCC BAA-894)42551.29
    89% 
    CROTZCronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032)44551.35
    90% 
    CRYCDCryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3)13550.47
    85% 
    CRYGACryptococcus gattii62093.19
    89% 
    CRYNJCryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565)62463.35
    91% 
    CRYPACryphonectria parasitica (Chesnut blight fungus)115634.89
    74% 
    CRYPVCryptosporidium parvum38042.27
     38%
    CULQUCulex quinquefasciatus (Southern house mosquito)186428.20
    66% 
    CUPNHCupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)66132.16
    93% 
    CUPPJCupriavidus pinatubonensis (strain JMP 134 / LMG 1197)64332.11
    93% 
    CUPTRCupriavidus taiwanensis (strain R1 / LMG 19424)59001.89
    91% 
    CYAA5Cyanothece sp. (strain ATCC 51142)52331.56
    79% 
    CYAAPCyanobacterium aponinum (strain PCC 10605)34151.11
    88% 
    CYAGPCyanobium gracile (strain ATCC 27147 / PCC 6307)32600.99
    76% 
    CYAMECyanidioschyzon merolae (Red alga)49462.50
     45%
    CYAP0Cyanothece sp. (strain PCC 8802)44031.34
    94% 
    CYAP2Cyanothece sp. (strain PCC 7822)65572.14
    79% 
    CYAP4Cyanothece sp. (strain PCC 7425 / ATCC 29141)52311.61
    76% 
    CYAP7Cyanothece sp. (strain PCC 7424)56521.75
    85% 
    CYAP8Cyanothece sp. (strain PCC 8801)43351.34
    96% 
    CYASCCyanobacterium stanieri (strain ATCC 29140 / PCC 7202)28310.90
    91% 
    CYCMSCyclobacterium marinum (strain ATCC 25205 / DSM 745)49791.78
    82% 
    CYCSPCycloclasticus sp. (strain P1)22470.72
    88% 
    CYTH3Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)37701.33
    74% 
    DANPLDanaus plexippus (Monarch butterfly)162326.70
    68% 
    DANREDanio rerio (Zebrafish)2749914.47
    79% 
    DAPPUDaphnia pulex (Water flea)300889.92
     35%
    DASNODasypus novemcinctus (Nine-banded armadillo)2353311.60
    84% 
    DEBHADebaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)62633.00
    86% 
    DECARDechloromonas aromatica (strain RCB)41551.37
    88% 
    DEFDSDeferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1)23530.77
    85% 
    DEHLBDehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9)16180.48
    79% 
    DEHM1Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195)15020.42
    87% 
    DEHMBDehalococcoides mccartyi (strain ATCC BAA-2100 / JCM 16839 / KCTC 5957 / BAV1)13550.40
    95% 
    DEHMCDehalococcoides mccartyi (strain CBDB1)14540.42
    94% 
    DEHMGDehalococcoides mccartyi (strain GT)13780.40
    95% 
    DEHMVDehalococcoides mccartyi (strain VS)14260.42
    95% 
    DEIDVDeinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923)34461.08
    87% 
    DEIGDDeinococcus geothermalis (strain DSM 11300)28210.90
    91% 
    DEIGIDeinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0)43281.23
    73% 
    DEIMLDeinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34)32621.03
    86% 
    DEIPDDeinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200)41631.26
    75% 
    DEIPMDeinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703)26500.83
    81% 
    DEIRADeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)30840.95
    82% 
    DEKBRDekkera bruxellensis55712.46
    66% 
    DELASDelftia acidovorans (strain DSM 14801 / SPH-1)59662.00
    93% 
    DELSCDelftia sp. (strain Cs1-4)58551.98
    94% 
    DENA2Denitrovibrio acetiphilus (strain DSM 12809 / N2460)29010.95
    79% 
    DENPDDendroctonus ponderosae (Mountain pine beetle)126055.36
    69% 
    DESAADesulfatibacillum alkenivorans (strain AK-01)51921.87
    73% 
    DESADDesulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763)38071.26
    83% 
    DESAHDesulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)47771.62
    80% 
    DESAJDesulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4)44691.33
    81% 
    DESAPDesulforudis audaxviator (strain MP104C)21350.66
    82% 
    DESARDesulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2)28590.92
    75% 
    DESASDesulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644)40161.20
    76% 
    DESATDesulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2)25950.90
    82% 
    DESB2Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14)32681.10
    79% 
    DESBDDesulfomicrobium baculatum (strain DSM 4028 / VKM B-1378)34211.17
    86% 
    DESCCDesulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB)26200.79
    93% 
    DESDADesulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949)23450.80
    82% 
    DESDGDesulfovibrio desulfuricans (strain G20)37191.11
    76% 
    DESDLDesulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1)32941.02
    91% 
    DESHDDesulfitobacterium hafniense (strain DCB-2 / DSM 10664)48521.50
    92% 
    DESHYDesulfitobacterium hafniense (strain Y51)50151.60
    91% 
    DESISDesulfurispirillum indicum (strain ATCC BAA-1389 / S5)25510.85
    73% 
    DESK1Desulfurococcus kamchatkensis (strain 1221n / DSM 18924)14700.40
    86% 
    DESK7Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17)33851.01
    80% 
    DESM0Desulfurococcus mucosus (strain ATCC 35584 / DSM 2162 / JCM 9187 / O7/1)13450.39
    95% 
    DESMDDesulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10)43401.33
    87% 
    DESMRDesulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1)46631.53
    71% 
    DESOHDesulfococcus oleovorans (strain DSM 6200 / Hxd3)32551.15
    80% 
    DESPCDesulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30)33421.08
    82% 
    DESPDDesulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3)32591.12
    85% 
    DESPSDesulfotalea psychrophila (strain LSv54 / DSM 12343)32361.04
    75% 
    DESRDDesulfohalobium retbaense (strain DSM 5692)24550.80
    86% 
    DESRLDesulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL)37631.10
    88% 
    DESRMDesulfotomaculum reducens (strain MI-1)32140.98
    89% 
    DESSDDesulfocapsa sulfexigens (strain DSM 10523 / SB164P1)35141.19
    81% 
    DESTADesulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1)54121.76
    64% 
    DESTDDesulfurobacterium thermolithotrophum (strain DSM 11699 / BSA)14950.47
    93% 
    DESTTDesulfobacula toluolica (strain DSM 7467 / Tol2)41851.46
    82% 
    DESVHDesulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303)35171.08
    88% 
    DESVMDesulfovibrio vulgaris (strain Miyazaki F / DSM 19637)31781.11
    91% 
    DESVRDesulfovibrio vulgaris (strain RCH1)32141.06
    97% 
    DESVVDesulfovibrio vulgaris subsp. vulgaris (strain DP4)30841.04
    96% 
    DICD3Dickeya dadantii (strain 3937)45501.42
    89% 
    DICD5Dickeya dadantii (strain Ech586)41411.37
    96% 
    DICDCDickeya dadantii (strain Ech703)39601.32
    94% 
    DICDIDictyostelium discoideum (Slime mold)129216.88
    64% 
    DICNVDichelobacter nodosus (strain VCS1703A)12730.42
    78% 
    DICPUDictyostelium purpureum (Slime mold)123175.96
    66% 
    DICSQDichomitus squalens (strain LYAD-421) (Western red white-rot fungus)122445.13
    74% 
    DICT6Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)19120.61
    91% 
    DICTDDictyoglomus turgidum (strain Z-1310 / DSM 6724)17430.57
    95% 
    DICZEDickeya zeae (strain Ech1591)41301.35
    96% 
    DINSHDinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12)40741.29
    87% 
    DIPORDipodomys ordii (Ord's kangaroo rat)157187.84
    94% 
    DROANDrosophila ananassae (Fruit fly)149097.35
    89% 
    DROBPDrosophila bipectinata (Fruit fly)142657.64
    87% 
    DROERDrosophila erecta (Fruit fly)148257.25
    92% 
    DROEUDrosophila eugracilis (Fruit fly)145157.48
    82% 
    DROFCDrosophila ficusphila (Fruit fly)140647.31
    82% 
    DROGRDrosophila grimshawi (Fruit fly)146047.35
    87% 
    DROKIDrosophila kikkawai (Fruit fly)139747.47
    84% 
    DROMEDrosophila melanogaster (Fruit fly)145067.82
    96% 
    DROMODrosophila mojavensis (Fruit fly)144747.17
    88% 
    DROPEDrosophila persimilis (Fruit fly)166677.16
    82% 
    DROPSDrosophila pseudoobscura pseudoobscura (Fruit fly)159187.80
    90% 
    DROSEDrosophila sechellia (Fruit fly)159797.07
    88% 
    DROSIDrosophila simulans (Fruit fly)153016.27
    85% 
    DROTKDrosophila takahashii (Fruit fly)134596.99
    81% 
    DROVIDrosophila virilis (Fruit fly)143517.21
    90% 
    DROWIDrosophila willistoni152457.45
    82% 
    DROYADrosophila yakuba (Fruit fly)158457.49
    89% 
    DYAFDDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)57032.08
    83% 
    ECHTEEchinops telfairi (Lesser hedgehog tenrec)164997.36
    88% 
    ECHVKEchinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221)45081.60
    85% 
    ECO10Escherichia coli O103:H2 (strain 12009 / EHEC)51781.57
    96% 
    ECO1AEscherichia coli O111:H- (strain 11128 / EHEC)55371.64
    94% 
    ECO1EEscherichia coli O104:H4 (strain 2009EL-2071)50401.53
    97% 
    ECO24Escherichia coli O139:H28 (strain E24377A / ETEC)49121.47
    91% 
    ECO26Escherichia coli O26:H11 (strain 11368 / EHEC)55681.66
    96% 
    ECO27Escherichia coli O127:H6 (strain E2348/69 / EPEC)47551.46
    95% 
    ECO44Escherichia coli O44:H18 (strain 042 / EAEC)49941.57
    97% 
    ECO45Escherichia coli O45:K1 (strain S88 / ExPEC)49471.51
    97% 
    ECO55Escherichia coli (strain 55989 / EAEC)49371.52
    97% 
    ECO57Escherichia coli O157:H752631.60
    95% 
    ECO5EEscherichia coli O157:H7 (strain EC4115 / EHEC)52721.54
    92% 
    ECO5TEscherichia coli O157:H7 (strain TW14359 / EHEC)52411.57
    96% 
    ECO7IEscherichia coli O7:K1 (strain IAI39 / ExPEC)46891.47
    96% 
    ECO81Escherichia coli O81 (strain ED1a)51321.54
    94% 
    ECO8AEscherichia coli O8 (strain IAI1)44141.38
    97% 
    ECO8NEscherichia coli O83:H1 (strain NRG 857C / AIEC)45731.43
    97% 
    ECOABEscherichia coli OR:K5:H- (strain ABU 83972)47841.50
    97% 
    ECOBBEscherichia coli (strain B / BL21)41571.32
    96% 
    ECOBDEscherichia coli (strain B / BL21-DE3)41561.30
    98% 
    ECOBREscherichia coli (strain B / REL606)41411.32
    98% 
    ECOBWEscherichia coli (strain K12 / MC4100 / BW2952)40401.29
    99% 
    ECOC1Escherichia coli (strain 'clone D i14')49071.49
    95% 
    ECOC2Escherichia coli (strain 'clone D i2')49071.49
    95% 
    ECOCBEscherichia coli O55:H7 (strain CB9615 / EPEC)50811.57
    96% 
    ECOD1Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)41231.31
    99% 
    ECODHEscherichia coli (strain K12 / DH10B)40501.27
    99% 
    ECOH1Escherichia coli O78:H11 (strain H10407 / ETEC)48631.52
    97% 
    ECOHSEscherichia coli O9:H4 (strain HS)43101.32
    94% 
    ECOK1Escherichia coli O1:K1 / APEC48641.59
    98% 
    ECOKIEscherichia coli O18:K1:H7 (strain IHE3034 / ExPEC)47481.46
    95% 
    ECOKOEscherichia coli (strain ATCC 55124 / KO11)46341.46
    99% 
    ECOL5Escherichia coli O6:K15:H31 (strain 536 / UPEC)46571.45
    96% 
    ECOL6Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)53361.56
    92% 
    ECOLCEscherichia coli (strain ATCC 8739 / DSM 1576 / Crooks)41711.35
    99% 
    ECOLIEscherichia coli (strain K12)43521.37
    98% 
    ECOLUEscherichia coli O17:K52:H18 (strain UMN026 / ExPEC)50541.57
    97% 
    ECOLWEscherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W)48561.51
    96% 
    ECOLXEscherichia coli54301.47
    89% 
    ECOS5Escherichia coli O150:H5 (strain SE15)44611.41
    98% 
    ECOSEEscherichia coli (strain SE11)49821.51
    95% 
    ECOSMEscherichia coli (strain SMS-3-5 / SECEC)48761.50
    94% 
    ECOUMEscherichia coli (strain UM146)47771.47
    96% 
    ECOUTEscherichia coli (strain UTI89 / UPEC)51911.56
    96% 
    EDWI9Edwardsiella ictaluri (strain 93-146)37241.05
    81% 
    EDWTEEdwardsiella tarda (strain EIB202)35681.07
    89% 
    EDWTFEdwardsiella tarda (strain FL6-60)32511.04
    96% 
    EGGLEEggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255)30541.04
    67% 
    EHRCJEhrlichia canis (strain Jake)9210.31
    89% 
    EHRCREhrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas)10980.31
    74% 
    EHRRGEhrlichia ruminantium (strain Gardel)9490.32
    96% 
    EHRRWEhrlichia ruminantium (strain Welgevonden)10430.35
    92% 
    ELUMPElusimicrobium minutum (strain Pei191)15280.49
    62% 
    EMENDEmericella nidulans106745.17
    96% 
    EMENIEmericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)105105.07
    94% 
    EMIHUEmiliania huxleyi3145411.17
     22%
    EMTOGEmticicia oligotrophica (strain DSM 17448 / GPTSA100-15)42511.54
    88% 
    ENCCUEncephalitozoon cuniculi (strain GB-M1)18950.69
     35%
    ENT38Enterobacter sp. (strain 638)42361.36
    97% 
    ENTAKEnterobacter aerogenes (strain ATCC 13048 / DSM 30053 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006)49091.53
    94% 
    ENTALEnterobacter asburiae (strain LF7a)45991.47
    95% 
    ENTBFEnterobacteriaceae bacterium (strain FGI 57)43201.39
    96% 
    ENTCCEnterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCDC 279-56)54051.61
    89% 
    ENTF6Enterococcus faecalis (strain 62)30080.89
    91% 
    ENTFAEnterococcus faecalis (strain ATCC 700802 / V583)32390.95
    86% 
    ENTFOEnterococcus faecalis (strain ATCC 47077 / OG1RF)25780.81
    95% 
    ENTFUEnterococcus faecium (strain Aus0004)28170.83
    83% 
    ENTLSEnterobacter lignolyticus (strain SCF1)43931.42
    96% 
    ERIEUErinaceus europaeus (Western European hedgehog)144886.65
    92% 
    ERWACErwinia amylovora (strain CFBP1430)37331.09
    86% 
    ERWAEErwinia amylovora (strain ATCC 49946 / CCPPB 0273 / Ea273 / 27-3)36091.12
    92% 
    ERWBEErwinia billingiae (strain Eb661)49291.56
    92% 
    ERWP6Erwinia pyrifoliae (strain DSM 12163 / CIP 106111 / Ep16/96)39311.14
    88% 
    ERWPEErwinia pyrifoliae (strain Ep1/96)36731.14
    96% 
    ERWSEErwinia sp. (strain Ejp617)36261.10
    92% 
    ERWT9Erwinia tasmaniensis (strain DSM 17950 / Et1/99)36911.16
    91% 
    ERYLHErythrobacter litoralis (strain HTCC2594)29990.93
    82% 
    ERYRFErysipelothrix rhusiopathiae (strain Fujisawa)16860.53
    71% 
    ESCF3Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)43631.38
    94% 
    ETHHYEthanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3)26630.84
    78% 
    EUBE2Eubacterium eligens (strain ATCC 27750 / VPI C15-48)27610.86
    73% 
    EUBLKEubacterium limosum (strain KIST612)44981.28
    64% 
    EUBR3Eubacterium rectale (strain ATCC 33656 / VPI 0990)35421.02
    67% 
    EURHEEurotium herbariorum100564.59
    81% 
    EXIABExiguobacterium antarcticum (strain B7)27680.80
    96% 
    EXIS2Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)30050.88
    95% 
    EXISAExiguobacterium sp. (strain ATCC BAA-1283 / AT1b)30200.89
    85% 
    FELCAFelis catus (Cat)1962310.29
    93% 
    FERBDFerrimonas balearica (strain DSM 9799 / CCM 4581 / PAT)37811.26
    87% 
    FERFKFervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940)13840.38
    75% 
    FERNBFervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1)17250.58
    96% 
    FERPAFerroglobus placidus (strain DSM 10642 / AEDII12DO)24630.66
    77% 
    FERPDFervidobacterium pennivorans (strain DSM 9078 / Ven5)19200.65
    93% 
    FIBSSFibrobacter succinogenes (strain ATCC 19169 / S85)30841.16
    52% 
    FICALFicedula albicollis (Collared flycatcher)153838.41
    94% 
    FILADFilifactor alocis (strain ATCC 35896 / D40 B5)16140.52
    80% 
    FINM2Finegoldia magna (strain ATCC 29328)18130.60
    77% 
    FLAB3Flavobacteriaceae bacterium (strain 3519-10)25300.83
    82% 
    FLABFFlavobacterium branchiophilum (strain FL-15)28480.98
    86% 
    FLACAFlavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87)26110.89
    87% 
    FLAIGFlavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9)26480.89
    87% 
    FLAJ1Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)50161.77
    85% 
    FLAPJFlavobacterium psychrophilum (strain JIP02/86 / ATCC 49511)24280.81
    89% 
    FLESMFlexistipes sinusarabici (strain DSM 4947 / MAS 10)22570.71
    88% 
    FLUTRFluviicola taffensis (strain DSM 16823 / RW262 / RW262)40161.39
    69% 
    FOMMEFomitiporia mediterranea (strain MF3/22) (Grapevine white-rot fungus)112954.83
    65% 
    FOMPIFomitopsis pinicola (strain FP-58527) (Brown rot fungus)138125.60
    70% 
    FRAAAFrankia alni (strain ACN14a)67232.16
    74% 
    FRAADFrateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370)30981.04
    81% 
    FRACFFrancisella cf. novicida (strain Fx1)18100.57
    94% 
    FRACNFrancisella cf. novicida (strain 3523)18540.58
    91% 
    FRADGFrankia symbiont subsp. Datisca glomerata40621.33
    79% 
    FRANTFrancisella noatunensis subsp. orientalis (strain Toba 04)15950.45
    83% 
    FRAP2Francisella philomiragia subsp. philomiragia (strain ATCC 25017)18750.61
    92% 
    FRASCFrankia sp. (strain CcI3)44361.51
    84% 
    FRASNFrankia sp. (strain EAN1pec)71282.47
    79% 
    FRASUFrankia sp. (strain EuI1c)70792.52
    82% 
    FRAT1Francisella tularensis subsp. tularensis (strain FSC 198)17220.54
    99% 
    FRATEFrancisella tularensis subsp. tularensis (strain NE061598)17070.49
    93% 
    FRATFFrancisella tularensis subsp. holarctica (strain FTNF002-00 / FTA)15080.46
    97% 
    FRATHFrancisella tularensis subsp. holarctica (strain LVS)18690.53
    87% 
    FRATMFrancisella tularensis subsp. mediasiatica (strain FSC147)13870.44
    99% 
    FRATNFrancisella tularensis subsp. novicida (strain U112)17190.57
    98% 
    FRATOFrancisella tularensis subsp. holarctica (strain OSU18)15060.45
    97% 
    FRATTFrancisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)17220.54
    99% 
    FRATWFrancisella tularensis subsp. tularensis (strain WY96-3418)15730.48
    97% 
    FUSNNFusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)20480.64
    76% 
    FUSO4Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) (Fusarium vascular wilt of tomato)165906.86
    71% 
    GADMOGadus morhua (Atlantic cod)204799.36
    87% 
    GALAUGallibacterium anatis (strain UMN179)24710.79
    87% 
    GALCSGallionella capsiferriformans (strain ES-2)28520.94
    85% 
    GARV3Gardnerella vaginalis (strain ATCC 14019 / 317)13640.48
    87% 
    GARV4Gardnerella vaginalis (strain 409-05)12560.46
    84% 
    GARVHGardnerella vaginalis (strain HMP9231)13120.48
    92% 
    GASACGasterosteus aculeatus (Three-spined stickleback)2177311.05
    88% 
    GEMATGemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505)39311.42
    65% 
    GEOBBGeobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)40091.33
    94% 
    GEODFGeobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32)37971.29
    89% 
    GEOKAGeobacillus kaustophilus (strain HTA426)35131.01
    90% 
    GEOLSGeobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ)36431.20
    84% 
    GEOMGGeobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)35021.19
    91% 
    GEOOGGeodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20)47951.49
    88% 
    GEOS0Geobacillus sp. (strain Y4.1MC1)36021.03
    95% 
    GEOS4Geobacillus sp. (strain Y412MC10)62372.03
    86% 
    GEOS8Geobacter sp. (strain M18)44061.51
    90% 
    GEOSKGeobacter sulfurreducens (strain DL-1 / KN400)33091.11
    97% 
    GEOSLGeobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)34151.13
    93% 
    GEOSMGeobacter sp. (strain M21)40671.36
    94% 
    GEOSWGeobacillus sp. (strain WCH70)30480.88
    93% 
    GEOSYGeobacillus sp. (strain Y412MC61)34141.00
    93% 
    GEOTCGeobacillus thermoglucosidasius (strain C56-YS93)37111.06
    93% 
    GEOTNGeobacillus thermodenitrificans (strain NG80-2)34191.00
    90% 
    GEOURGeobacter uraniireducens (strain Rf4)42531.45
    89% 
    GIAICGiardia intestinalis (strain ATCC 50803 / WB clone C6)58263.12
     20%
    GIBZAGibberella zeae (Wheat head blight fungus)133205.93
    79% 
    GLOTRGloeophyllum trabeum (Brown rot fungus)117824.96
    75% 
    GLOVIGloeobacter violaceus (strain PCC 7421)44071.38
    63% 
    GLUDAGluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)38501.19
    80% 
    GLUOXGluconobacter oxydans (strain 621H)26220.86
    80% 
    GLUXNGluconacetobacter xylinus (strain NBRC 3288 / BCRC 11682 / LMG 1693)31070.99
    84% 
    GORB4Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667)45461.48
    85% 
    GORGOGorilla gorilla gorilla (Lowland gorilla)2182211.02
    89% 
    GRABCGranulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)24350.82
    84% 
    GRAFKGramella forsetii (strain KT0803)35541.14
    85% 
    GRATMGranulicella tundricola MP5ACTX945141.57
    76% 
    GUITHGuillardia theta2505510.29
     29%
    HAEDUHaemophilus ducreyi (strain 35000HP / ATCC 700724)16950.48
    83% 
    HAEI1Haemophilus influenzae (strain 10810)18870.57
    94% 
    HAEI2Haemophilus influenzae (strain R2846 / 12)16300.52
    99% 
    HAEI6Haemophilus influenzae (strain R2866)17930.56
    98% 
    HAEI8Haemophilus influenzae (strain 86-028NP)17930.55
    97% 
    HAEIEHaemophilus influenzae (strain PittEE)16180.48
    94% 
    HAEIGHaemophilus influenzae (strain PittGG)16650.47
    92% 
    HAEINHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)17030.52
    95% 
    HAEP3Haemophilus parainfluenzae (strain T3T1)19870.62
    92% 
    HAEPSHaemophilus parasuis serovar 5 (strain SH0165)19910.59
    88% 
    HAHCHHahella chejuensis (strain KCTC 2396)67552.11
    67% 
    HALBPHalogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3)38941.13
    84% 
    HALEDHalomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)34701.17
    91% 
    HALH1Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O)67022.56
    71% 
    HALHCHalobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1)24520.76
    85% 
    HALHGHalanaerobium hydrogeniformans22490.74
    88% 
    HALHLHalorhodospira halophila (strain DSM 244 / SL1)24050.82
    84% 
    HALHTHaloarcula hispanica (strain ATCC 33960 / DSM 4426 / JCM 8911 / NBRC 102182 / NCIMB 2187 / VKM B-1755)38551.11
    92% 
    HALJBHalalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3)37791.01
    74% 
    HALLTHalorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34)34931.01
    82% 
    HALMAHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)42311.20
    86% 
    HALMDHalomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541)31680.90
    87% 
    HALMTHaloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4)38611.10
    85% 
    HALNCHalothiobacillus neapolitanus (strain ATCC 23641 / c2)23530.76
    83% 
    HALO1Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)66832.76
    58% 
    HALOHHalothermothrix orenii (strain H 168 / OCM 544 / DSM 9562)23240.74
    85% 
    HALP7Halothece sp. (strain PCC 7418)37001.18
    85% 
    HALPGHalanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL)20540.67
    92% 
    HALRXHalovivax ruber (strain DSM 18193 / JCM 13892 / XH-70)30990.91
    84% 
    HALS3Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)27420.76
    91% 
    HALSAHalobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)24180.68
    93% 
    HALTVHaloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734)37391.09
    90% 
    HALUDHalorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2)29980.91
    82% 
    HALVDHaloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)39861.13
    85% 
    HALWCHaloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23)29740.85
    88% 
    HALWDHaloquadratum walsbyi (strain DSM 16790 / HBSQ001)28190.80
    87% 
    HALXSHalopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6)42211.23
    87% 
    HAMD5Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT)20390.56
    66% 
    HELAHHelicobacter acinonychis (strain Sheeba)15940.46
    85% 
    HELBCHelicobacter bizzozeronii (strain CIII-1)19570.55
    70% 
    HELCPHelicobacter cinaedi (strain PAGU611)21160.63
    75% 
    HELFCHelicobacter felis (strain ATCC 49179 / NCTC 12436 / CS1)16660.51
    80% 
    HELHPHelicobacter hepaticus (strain ATCC 51449 / 3B1)18720.56
    80% 
    HELM1Helicobacter mustelae (strain ATCC 43772 / LMG 18044 / NCTC 12198 / 12198)14270.47
    84% 
    HELMIHeliobacterium modesticaldum (strain ATCC 51547 / Ice1)29180.85
    71% 
    HELP1Helicobacter pylori (strain 51)14110.46
    98% 
    HELP2Helicobacter pylori (strain P12)15730.50
    95% 
    HELP3Helicobacter pylori (strain B8)17110.51
    89% 
    HELP4Helicobacter pylori (strain Gambia94/24)15990.50
    92% 
    HELP5Helicobacter pylori (strain 52)14030.46
    98% 
    HELP7Helicobacter pylori (strain India7)15950.50
    91% 
    HELP9Helicobacter pylori (strain 908)15950.47
    88% 
    HELPBHelicobacter pylori (strain B38)15090.48
    95% 
    HELPCHelicobacter pylori (strain Cuz20)15630.49
    94% 
    HELPFHelicobacter pylori (strain 35A)14640.46
    95% 
    HELPGHelicobacter pylori (strain G27)15000.48
    97% 
    HELPHHelicobacter pylori (strain HPAG1)15390.49
    94% 
    HELPIHelicobacter pylori (strain F16)14860.47
    97% 
    HELPJHelicobacter pylori (strain J99 / ATCC 700824)14880.49
    97% 
    HELPKHelicobacter pylori (strain F30)14800.48
    97% 
    HELPMHelicobacter pylori (strain SJM180)15780.49
    92% 
    HELPPHelicobacter pylori (strain PeCan4)15630.48
    92% 
    HELPQHelicobacter pylori (strain F57)15150.49
    96% 
    HELPRHelicobacter pylori (strain Lithuania75)15590.48
    91% 
    HELPSHelicobacter pylori (strain Shi470)15640.48
    91% 
    HELPVHelicobacter pylori (strain v225d)15470.47
    90% 
    HELPYHelicobacter pylori (strain ATCC 700392 / 26695)15550.49
    93% 
    HELROHelobdella robusta232638.76
     43%
    HERA2Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)52541.96
    65% 
    HERARHerminiimonas arsenicoxydans33211.00
    88% 
    HETANHeterobasidion annosum (Root rot fungus)121624.67
    62% 
    HIPMAHippea maritima (strain ATCC 700847 / DSM 10411 / MH2)16530.52
    75% 
    HIRBIHirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418)31871.05
    82% 
    HISS1Histophilus somni (strain 129Pt)17920.59
    93% 
    HISS2Histophilus somni (strain 2336)19710.66
    92% 
    HODCDHodgkinia cicadicola (strain Dsem)1690.04
     38%
    HORSEEquus caballus (Horse)2040510.48
    92% 
    HORVDHordeum vulgare var. distichum (Two-rowed barley)292149.57
    76% 
    HUMANHomo sapiens (Human)3080813.25
    64% 
    HYDS0Hydrogenobaculum sp. (strain Y04AAS1)16260.49
    81% 
    HYDTTHydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)18920.56
    87% 
    HYPAIHypocrea atroviridis (strain ATCC 20476 / IMI 206040)118575.39
    84% 
    HYPBUHyperthermus butylicus (strain DSM 5456 / JCM 9403)16020.45
    78% 
    HYPDAHyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)34491.05
    86% 
    HYPJEHypocrea jecorina91284.49
    92% 
    HYPNAHyphomonas neptunium (strain ATCC 15444)34991.11
    83% 
    HYPSMHyphomicrobium sp. (strain MC1)49031.42
    78% 
    HYPVGHypocrea virens (strain Gv29-8 / FGSC 10586) (Gliocladium virens)124075.84
    87% 
    IDILOIdiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)26090.86
    89% 
    IGNAAIgnisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1)19290.54
    68% 
    IGNAJIgnavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16)31691.12
    72% 
    IGNH4Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)14340.40
    64% 
    ILYPCIlyobacter polytropus (strain DSM 2926 / CuHBu1)28590.87
    76% 
    ISOPIIsosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B)37211.55
    73% 
    IXOSCIxodes scapularis (Tick)204545.81
     42%
    JANMAJanthinobacterium sp. (strain Marseille)36951.22
    93% 
    JANSCJannaschia sp. (strain CCS1)42701.32
    83% 
    JONDDJonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134)24950.82
    84% 
    KANKDKangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125)26300.85
    82% 
    KETVYKetogulonicigenium vulgare (strain Y25)32090.96
    80% 
    KINRDKineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)46731.49
    79% 
    KITSKKitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)74412.50
    81% 
    KLEOKKlebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686)54821.73
    94% 
    KLEP3Klebsiella pneumoniae (strain 342)57381.71
    91% 
    KLEP7Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)51161.60
    96% 
    KLEPHKlebsiella pneumoniae subsp. pneumoniae (strain HS11286)52841.55
    90% 
    KLEVTKlebsiella variicola (strain At-22)50561.60
    98% 
    KLULAKluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (Yeast)52302.48
    84% 
    KOCRDKocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201)23530.79
    85% 
    KORCOKorarchaeum cryptofilum (strain OPF8)16020.47
    72% 
    KORVEKoribacter versatilis (strain Ellin345)47701.68
    73% 
    KOSOTKosmotoga olearia (strain TBF 19.5.1)20860.67
    78% 
    KRIFDKribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399)69402.26
    85% 
    KROS4Krokinobacter sp. (strain 4H-3-7-5)29781.02
    92% 
    KYRT2Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2)31350.95
    78% 
    KYTSDKytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541)25310.81
    80% 
    LACA3Lactobacillus acidophilus (strain 30SC)20270.59
    91% 
    LACACLactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM)18610.58
    90% 
    LACALLactobacillus amylovorus (strain GRL 1118)19110.56
    92% 
    LACARLactobacillus amylovorus (strain GRL 1112)20200.59
    88% 
    LACBALactobacillus brevis (strain ATCC 367 / JCM 1170)21990.65
    85% 
    LACBILaccaria bicolor200527.45
     48%
    LACBNLactobacillus buchneri (strain NRRL B-30929)23600.71
    83% 
    LACC3Lactobacillus casei (strain ATCC 334)27060.78
    93% 
    LACCBLactobacillus casei (strain BL23)29990.86
    96% 
    LACCCLactobacillus casei (strain LC2W)31160.86
    93% 
    LACCDLactobacillus casei (strain BD-II)31630.87
    93% 
    LACCSLactobacillus crispatus (strain ST1)20010.60
    89% 
    LACCZLactobacillus casei (strain Zhang)28210.81
    92% 
    LACD2Lactobacillus delbrueckii subsp. bulgaricus (strain 2038)17610.50
    92% 
    LACDALactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081)20140.52
    84% 
    LACDBLactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365)16790.47
    90% 
    LACDNLactobacillus delbrueckii subsp. bulgaricus (strain ND02)19970.58
    84% 
    LACF3Lactobacillus fermentum (strain NBRC 3956 / LMG 18251)18180.55
    91% 
    LACFCLactobacillus fermentum (strain CECT 5716)10410.39
    93% 
    LACGALactobacillus gasseri (strain ATCC 33323 / DSM 20243)16940.54
    93% 
    LACGLLactococcus garvieae (strain Lg2)19370.56
    98% 
    LACGTLactococcus garvieae (strain ATCC 49156 / DSM 6783 / NCIMB 13208 / YT-3)19190.56
    98% 
    LACH4Lactobacillus helveticus (strain DPC 4571)15760.50
    95% 
    LACJOLactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533)18120.59
    91% 
    LACKZLactobacillus kefiranofaciens (strain ZW3)21330.62
    81% 
    LACLALactococcus lactis subsp. lactis (strain IL1403)22210.66
    94% 
    LACLKLactococcus lactis subsp. lactis (strain KF147)25580.75
    90% 
    LACLMLactococcus lactis subsp. cremoris (strain MG1363)24530.71
    95% 
    LACLNLactococcus lactis subsp. cremoris (strain NZ9000)24440.68
    95% 
    LACLSLactococcus lactis subsp. cremoris (strain SK11)24360.68
    88% 
    LACLVLactococcus lactis subsp. lactis (strain CV56)23620.68
    91% 
    LACPJLactobacillus plantarum (strain JDM1)29470.89
    95% 
    LACPLLactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)30900.94
    94% 
    LACPSLactobacillus plantarum (strain ST-III)30270.90
    93% 
    LACRDLactobacillus reuteri (strain DSM 20016)18640.56
    97% 
    LACRGLactobacillus rhamnosus (strain ATCC 53103 / GG)28770.84
    92% 
    LACRJLactobacillus reuteri (strain JCM 1112)17920.56
    99% 
    LACRLLactobacillus rhamnosus (strain Lc 705)29520.86
    90% 
    LACRSLactobacillus reuteri (strain ATCC 55730 / SD2112)21900.63
    85% 
    LACS1Lactobacillus salivarius (strain UCC118)20010.58
    87% 
    LACS5Lacinutrix sp. (strain 5H-3-7-4)29581.01
    91% 
    LACSCLactobacillus salivarius (strain CECT 5713)15320.54
    95% 
    LACSSLactobacillus sakei subsp. sakei (strain 23K)18720.54
    84% 
    LARHHLaribacter hongkongensis (strain HLHK9)32060.92
    74% 
    LATCHLatimeria chalumnae (West Indian ocean coelacanth)2035810.46
    87% 
    LAWIPLawsonia intracellularis (strain PHE/MN1-00)13440.48
    81% 
    LEAB4Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15)34261.20
    86% 
    LEGLNLegionella longbeachae serogroup 1 (strain NSW150)36461.19
    70% 
    LEGP2Legionella pneumophila serogroup 1 (strain 2300/99 Alcoy)31831.02
    95% 
    LEGPALegionella pneumophila (strain Paris)32041.06
    94% 
    LEGPCLegionella pneumophila (strain Corby)32041.03
    96% 
    LEGPHLegionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)39081.24
    84% 
    LEGPLLegionella pneumophila (strain Lens)29900.99
    94% 
    LEIBRLeishmania braziliensis80195.03
    92% 
    LEIINLeishmania infantum80315.02
    96% 
    LEIMALeishmania major80185.14
    98% 
    LEIXXLeifsonia xyli subsp. xyli (strain CTCB07)20030.59
    78% 
    LEPBALeptospira biflexa serovar Patoc (strain Patoc 1 / Ames)35941.21
    99% 
    LEPBDLeptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249)22170.68
    73% 
    LEPBJLeptospira borgpetersenii serovar Hardjo-bovis (strain JB197)28270.92
    99% 
    LEPBLLeptospira borgpetersenii serovar Hardjo-bovis (strain L550)28710.94
    99% 
    LEPBPLeptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris)37231.22
    96% 
    LEPCPLeptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6)43431.50
    89% 
    LEPFCLeptospirillum ferrooxidans (strain C2-3)24130.74
    79% 
    LEPFMLeptospirillum ferriphilum (strain ML-04)24500.72
    72% 
    LEPICLeptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)36471.15
    95% 
    LEPIILeptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain IPAV)36761.16
    98% 
    LEPINLeptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601)46871.21
    78% 
    LEPMJLeptosphaeria maculans (strain JN3 / isolate v23.1.3 / race Av1-4-5-6-7-8) (Blackleg fungus)124665.22
    61% 
    LEPOCLepisosteus oculatus (Spotted gar)1889310.61
    90% 
    LEUCJLeuconostoc carnosum (strain JB16)16900.51
    95% 
    LEUCKLeuconostoc citreum (strain KM20)18120.56
    92% 
    LEUGJLeuconostoc gelidum (strain JB7)17950.54
    94% 
    LEUGTLeuconostoc gasicomitatum (strain DSM 15947 / CECT 5767 / JCM 12535 / LMG 18811 / TB1-10)19100.57
    91% 
    LEUMMLeuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523)20020.61
    90% 
    LEUS2Leuconostoc sp. (strain C2)18530.55
    92% 
    LIBAPLiberibacter asiaticus (strain psy62)10990.32
    70% 
    LISINListeria innocua serovar 6a (strain CLIP 11262)30320.91
    95% 
    LISIPListeria ivanovii (strain ATCC BAA-678 / PAM 55)28050.85
    93% 
    LISM2Listeria monocytogenes serotype 1/2a (strain 08-5923)29610.89
    97% 
    LISM4Listeria monocytogenes serotype 1/2a (strain 10403S)28140.86
    99% 
    LISMCListeria monocytogenes serotype 4b (strain CLIP80459)27890.86
    99% 
    LISMFListeria monocytogenes serotype 4b (strain F2365)28190.85
    97% 
    LISMHListeria monocytogenes serotype 4a (strain HCC23)29710.88
    97% 
    LISMLListeria monocytogenes serotype 4a (strain L99)29230.88
    99% 
    LISMOListeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)28500.87
    99% 
    LISSSListeria seeligeri serovar 1/2b (strain ATCC 35967 / DSM 20751 / CIP 100100 / SLCC 3954)27220.83
    94% 
    LISW6Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)27750.83
    95% 
    LOALOLoa loa (Eye worm)148634.91
    61% 
    LODELLodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239)57722.94
    79% 
    LOTGILottia gigantea (Limpet)235148.96
    59% 
    LOXAFLoxodonta africana (African elephant)2105010.71
    90% 
    LYNSPLyngbya sp. (strain PCC 8106)61001.96
    70% 
    LYSSCLysinibacillus sphaericus (strain C3-41)47501.28
    76% 
    MACCJMacrococcus caseolyticus (strain JCSC5402)20590.64
    87% 
    MACEUMacropus eugenii (Tammar wallaby)152627.26
    92% 
    MACMUMacaca mulatta (Rhesus macaque)2477011.35
    80% 
    MAGGRMagnaporthe grisea (rice blast fungus)126375.57
    62% 
    MAGSAMagnetospirillum magneticum (strain AMB-1 / ATCC 700264)45111.45
    73% 
    MAGSMMagnetococcus sp. (strain MC-1)35891.33
    68% 
    MAHA5Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON)28570.93
    81% 
    MAIZEZea mays (Maize)4362614.96
    60% 
    MANESManihot esculenta (Cassava)3273712.78
    84% 
    MANSMMannheimia succiniciproducens (strain MBEL55E)23690.69
    83% 
    MARAHMarinobacter adhaerens (strain HP15)44061.39
    84% 
    MARAVMarinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8)41681.39
    87% 
    MARHTMarinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1)21940.69
    91% 
    MARM1Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1)41181.35
    85% 
    MARMMMaricaulis maris (strain MCS10)30601.01
    81% 
    MARMSMarinomonas sp. (strain MWYL1)44151.48
    91% 
    MARSHMaribacter sp. (strain HTCC2170 / KCCM 42371)34111.17
    90% 
    MARTHMarivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) (Microscilla tractuosa)37481.34
    81% 
    MEDTRMedicago truncatula (Barrel medic)4295612.67
     43%
    MEGSCMegaselia scalaris (Humpbacked fly)114282.53
     39%
    MEIRDMeiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21)29930.93
    88% 
    MEISDMeiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2)29990.93
    86% 
    MELCNMelitaea cinxia (Glanville fritillary)166285.28
     48%
    MELGAMeleagris gallopavo (Common turkey)146277.71
    92% 
    MELPDMelissococcus plutonius (strain DAT561)17090.54
    84% 
    MESAWMesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073)57901.78
    96% 
    MESCWMesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271)62601.92
    94% 
    MESFLMesoplasma florum (strain ATCC 33453 / NBRC 100688 / NCTC 11704 / L1)6830.25
    78% 
    META2Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z)40691.29
    98% 
    META3Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280)14900.44
    94% 
    METAAMethylomicrobium alcaliphilum39601.26
    98% 
    METACMethanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)44631.39
    75% 
    METB6Methanoregula boonei (strain 6A8)24500.73
    84% 
    METBFMethanosarcina barkeri (strain Fusaro / DSM 804)36111.12
    84% 
    METBMMethanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2)25750.77
    87% 
    METBUMethanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)22420.68
    85% 
    METC4Methylobacterium extorquens (strain CM4 / NCIMB 13688)54901.70
    93% 
    METCAMethylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)29250.97
    80% 
    METCGMethanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6)27820.82
    74% 
    METCRMetallosphaera cuprina (strain Ar-4)20290.54
    88% 
    METCZMethanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254)24480.70
    88% 
    METEAMethylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1)62331.86
    82% 
    METEDMethylobacterium extorquens (strain DSM 5838 / DM4)58821.71
    89% 
    METEPMethylobacterium extorquens (strain PA1)48221.53
    95% 
    METEZMethanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303)22480.67
    84% 
    METFAMethanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86)15460.44
    95% 
    METFJMethylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7)26890.84
    85% 
    METFKMethylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875)26080.85
    90% 
    METFSMethanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP)28150.81
    80% 
    METFVMethanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S)12830.38
    92% 
    METGSMethylovorus glucosetrophus (strain SIP3-4)29060.93
    91% 
    METH6Methanosaeta harundinacea (strain 6Ac)23580.73
    79% 
    METHDMethanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1)25510.77
    80% 
    METHJMethanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1)30951.00
    71% 
    METI4Methylacidiphilum infernorum (isolate V4)24700.69
    55% 
    METIKMethanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5)17520.50
    91% 
    METIMMethanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME)14390.41
    94% 
    METJAMethanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)17820.50
    92% 
    METKAMethanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)16900.50
    57% 
    METLAMethanobacterium lacus (strain AL-21)24930.72
    98% 
    METLZMethanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z)17390.52
    80% 
    METM5Methanococcus maripaludis (strain C5 / ATCC BAA-1333)18210.51
    94% 
    METM6Methanococcus maripaludis (strain C6 / ATCC BAA-1332)18250.51
    94% 
    METM7Methanococcus maripaludis (strain C7 / ATCC BAA-1331)17850.51
    96% 
    METMAMethanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)32981.00
    87% 
    METMIMethanococcus maripaludis18490.51
    95% 
    METMJMethanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1)24740.71
    89% 
    METMLMethylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540)23340.76
    92% 
    METMMMethylomonas methanica (strain MC09)44331.45
    77% 
    METMPMethanococcus maripaludis (strain S2 / LL)17220.49
    98% 
    METMSMethanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP)19860.59
    91% 
    METNJMethylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1)30090.92
    84% 
    METNOMethylobacterium nodulans (strain ORS2060 / LMG 21967)81252.31
    77% 
    METOIMethanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1)15830.46
    92% 
    METP4Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847)27790.83
    78% 
    METPBMethylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)53251.65
    92% 
    METPEMethanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)26550.82
    76% 
    METPPMethylibium petroleiphilum (strain PM1)43551.38
    84% 
    METPSMethanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE)29920.85
    84% 
    METRJMethylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)63851.94
    84% 
    METRMMethanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1)22070.76
    69% 
    METS3Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861)17830.55
    79% 
    METS4Methylobacterium sp. (strain 4-46)66462.08
    87% 
    METS5Metallosphaera sedula (strain ATCC 51363 / DSM 5348)22560.64
    93% 
    METS6Methylovorus sp. (strain MP688)27090.85
    93% 
    METSBMethylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906)38161.22
    86% 
    METSFMethanocaldococcus sp. (strain FS406-22)18030.51
    94% 
    METSLMethanobacterium sp. (strain AL-21)24930.72
    98% 
    METSTMethanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3)15330.49
    80% 
    METSWMethanobacterium sp. (strain SWAN-1)23940.66
    83% 
    METSZMethylocystis sp. (strain SC2)40381.21
    76% 
    METTHMethanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)18680.52
    88% 
    METTMMethanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg)17550.49
    92% 
    METTPMethanosaeta thermophila (strain DSM 6194 / PT)16730.51
    91% 
    METV3Methanococcus voltae (strain ATCC BAA-1334 / A3)16570.50
    82% 
    METVMMethanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7)17250.49
    92% 
    METVSMethanococcus vannielii (strain SB / ATCC 35089 / DSM 1224)16610.48
    95% 
    METZDMethanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5)19710.61
    88% 
    MICAAMicavibrio aeruginosavorus (strain ARL-13)24310.74
    62% 
    MICAIMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)62032.09
    96% 
    MICANMicrocystis aeruginosa (strain NIES-843)59461.51
    63% 
    MICLCMicrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230)22060.73
    86% 
    MICMUMicrocebus murinus (Lesser mouse lemur)162237.67
    94% 
    MICPNMicrolunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1)53031.70
    78% 
    MICSLMicromonospora sp. (strain L5)61292.07
    96% 
    MICTSMicrobacterium testaceum (strain StLB037)36691.21
    82% 
    MIDMIMidichloria mitochondrii (strain IricVA)11750.28
    54% 
    MIXOSMixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970)67833.40
    57% 
    MNELEMnemiopsis leidyi (Sea walnut)160207.40
     37%
    MOBCVMobiluncus curtisii (strain ATCC 43063 / DSM 2711 / V125)19060.64
    71% 
    MODMBModestobacter marinus (strain BC501)54811.70
    85% 
    MONBEMonosiga brevicollis91645.50
     45%
    MONDOMonodelphis domestica (Gray short-tailed opossum)168448.95
    88% 
    MOOTAMoorella thermoacetica (strain ATCC 39073)24500.75
    88% 
    MORCRMoraxella catarrhalis (strain RH4)18810.53
    72% 
    MOREPMoranella endobia (strain PCIT)4050.14
    98% 
    MOUSEMus musculus (Mouse)2567912.34
    79% 
    MUCCIMucor circinelloides115684.41
    73% 
    MURRDMuricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1)34711.16
    89% 
    MUSACMusa acuminata (Banana)3643912.54
    94% 
    MUSAMMusa acuminata subsp. malaccensis (Wild banana)3643912.54
    94% 
    MUSPFMustela putorius furo (European domestic ferret)1990510.63
    89% 
    MYCA0Mycobacterium africanum (strain GM041182)39161.32
    99% 
    MYCA1Mycobacterium avium (strain 104)50351.58
    90% 
    MYCA5Mycoplasma arthritidis (strain 158L3-1)6310.24
    78% 
    MYCA6Mycoplasma agalactiae (strain 5632)7660.28
    94% 
    MYCA9Mycobacterium abscessus (strain ATCC 19977 / DSM 44196)49391.57
    85% 
    MYCAPMycoplasma agalactiae (strain PG2)7480.26
    89% 
    MYCBGMycoplasma bovis (strain ATCC 25523 / PG45)7420.27
    95% 
    MYCBHMycoplasma bovis (strain Hubei-1)7900.28
    90% 
    MYCBOMycobacterium bovis (strain ATCC BAA-935 / AF2122/97)39431.31
    99% 
    MYCBPMycobacterium bovis (strain BCG / Pasteur 1173P2)39241.31
    99% 
    MYCBTMycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019)39241.31
    99% 
    MYCC1Mycoplasma cynos (strain C142)8700.30
    63% 
    MYCCMMycoplasma crocodyli (strain ATCC 51981 / MP145)6890.25
    79% 
    MYCCNMycobacterium chubuense (strain NBB4)57771.89
    92% 
    MYCCPMycobacterium canettii (strain CIPT 140010059)39091.34
    98% 
    MYCCRMycoplasma conjunctivae (strain ATCC 25834 / HRC/581 / NCTC 10147)6940.26
    76% 
    MYCCTMycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154)8110.30
    93% 
    MYCFJMycoplasma fermentans (strain JER)7940.28
    94% 
    MYCFMMycoplasma fermentans (strain M64)9540.30
    88% 
    MYCFPMycoplasma fermentans (strain ATCC 19989 / NBRC 14854 / NCTC 10117 / PG18)8890.30
    93% 
    MYCGAMycoplasma gallisepticum (strain R(low / passage 15 / clone 2))7260.29
    98% 
    MYCGEMycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195)4830.18
    93% 
    MYCGFMycoplasma gallisepticum (strain F)7370.28
    93% 
    MYCGHMycoplasma gallisepticum (strain R(high / passage 156))7630.30
    95% 
    MYCGIMycobacterium gilvum (strain PYR-GCK)54931.80
    96% 
    MYCGRMycosphaerella graminicola109324.77
    71% 
    MYCH2Mycoplasma hyopneumoniae (strain 232)6890.27
    92% 
    MYCH7Mycoplasma hyopneumoniae (strain 7448)6940.26
    91% 
    MYCHHMycoplasma hyorhinis (strain HUB-1)6550.24
    91% 
    MYCHIMycoplasma haemofelis (strain Ohio2)15270.36
    95% 
    MYCHJMycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110)6710.26
    95% 
    MYCHLMycoplasma haemofelis (strain Langford 1)15450.36
    94% 
    MYCHMMycoplasma hyorhinis (strain MCLD)7740.24
    79% 
    MYCHNMycoplasma haemocanis (strain Illinois)11750.28
    86% 
    MYCHPMycoplasma hominis (strain ATCC 23114 / NBRC 14850 / NCTC 10111 / PG21)5360.20
    85% 
    MYCIAMycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600)51271.64
    92% 
    MYCL9Mycoplasma leachii (strain 99/014/6)9020.30
    95% 
    MYCLBMycobacterium leprae (strain Br4923)26910.83
    99% 
    MYCLEMycobacterium leprae (strain TN)26910.83
    99% 
    MYCLGMycoplasma leachii (strain DSM 21131 / NCTC 10133 / N29 / PG50)8800.30
    96% 
    MYCMGMycoplasma mycoides subsp. mycoides SC (strain Gladysdale)10400.33
    90% 
    MYCMMMycobacterium marinum (strain ATCC BAA-535 / M)54181.98
    93% 
    MYCMOMycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711)6350.24
    73% 
    MYCMSMycoplasma mycoides subsp. mycoides SC (strain PG1)9750.32
    93% 
    MYCPAMycobacterium paratuberculosis (strain ATCC BAA-968 / K-10)43171.46
    95% 
    MYCPBMycoplasma pneumoniae (strain ATCC 15531 / NBRC 14401 / NCTC 10119 / FH)6290.21
    90% 
    MYCPEMycoplasma penetrans (strain HF-2)10280.40
    54% 
    MYCPKMycoplasma putrefaciens (strain ATCC 15718 / NCTC 10155 / C30 KS-1 / KS-1)6500.23
    90% 
    MYCPNMycoplasma pneumoniae (strain ATCC 29342 / M129)6860.24
    87% 
    MYCPUMycoplasma pulmonis (strain UAB CTIP)7780.29
    72% 
    MYCRNMycobacterium rhodesiae (strain NBB3)61051.95
    92% 
    MYCS2Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)65932.08
    89% 
    MYCS3Mycoplasma suis (strain KI_3806)8100.21
    82% 
    MYCS5Mycoplasma synoviae (strain 53)6790.24
    73% 
    MYCSDMycobacterium sp. (strain JDM601)43321.40
    88% 
    MYCSJMycobacterium sp. (strain JLS)56951.86
    98% 
    MYCSKMycobacterium sp. (strain KMS)58891.90
    99% 
    MYCSLMycoplasma suis (strain Illinois)8440.22
    79% 
    MYCSRMycobacterium sp. (strain Spyr1)52201.71
    97% 
    MYCSSMycobacterium sp. (strain MCS)55861.82
    99% 
    MYCTAMycobacterium tuberculosis (strain ATCC 25177 / H37Ra)39911.33
    99% 
    MYCTCMycobacterium tuberculosis (strain CCDC5079)36201.26
    96% 
    MYCTDMycobacterium tuberculosis (strain CCDC5180)35561.26
    99% 
    MYCTFMycobacterium tuberculosis (strain F11)38551.30
    99% 
    MYCTKMycobacterium tuberculosis (strain KZN 1435 / MDR)40211.33
    98% 
    MYCTUMycobacterium tuberculosis39541.33
    100% 
    MYCUAMycobacterium ulcerans (strain Agy99)41941.39
    91% 
    MYCVPMycobacterium vanbaalenii (strain DSM 7251 / PYR-1)59011.95
    94% 
    MYOLUMyotis lucifugus (Little brown bat)1986210.19
    92% 
    MYXFHMyxococcus fulvus (strain ATCC BAA-855 / HW-1)72252.62
    89% 
    MYXSDMyxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8)80423.15
    86% 
    MYXXDMyxococcus xanthus (strain DK 1622)72162.76
    91% 
    NAEGRNaegleria gruberi (Amoeba)155697.70
     30%
    NAKMYNakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104)51201.71
    82% 
    NANEQNanoarchaeum equitans (strain Kin4-M)5360.15
     49%
    NANS0Candidatus Nanosalina sp. J07AB4316730.35
     40%
    NANSJCandidatus Nanosalinarum sp. J07AB5614020.32
     44%
    NASVINasonia vitripennis (Parasitic wasp)169868.04
    56% 
    NATGSNatronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2)36241.03
    84% 
    NATM8Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11)28520.83
    86% 
    NATMMNatrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3)35581.05
    85% 
    NATP1Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786)41381.18
    89% 
    NATPDNatronomonas pharaonis (strain ATCC 35678 / DSM 2160)28240.82
    86% 
    NATSJNatrinema sp. (strain J7-2)42961.08
    75% 
    NATTJNatranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF)28360.89
    78% 
    NAUPANautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH)17300.52
    82% 
    NECHANectria haematococca156717.52
    81% 
    NEIG1Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)19580.55
    92% 
    NEIG2Neisseria gonorrhoeae (strain NCCP11945)25920.63
    74% 
    NEIM0Neisseria meningitidis serogroup C (strain 053442)19980.57
    93% 
    NEIM7Neisseria meningitidis serogroup B (strain alpha710)20390.61
    94% 
    NEIM8Neisseria meningitidis serogroup C (strain 8013)20980.61
    95% 
    NEIMANeisseria meningitidis serogroup A / serotype 4A (strain Z2491)19710.59
    98% 
    NEIMBNeisseria meningitidis serogroup B (strain MC58)20010.58
    93% 
    NEIMFNeisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18)19390.59
    98% 
    NEIMGNeisseria meningitidis serogroup B (strain G2136)19380.58
    97% 
    NEIMHNeisseria meningitidis serogroup B / serotype 15 (strain H44/76)19900.60
    97% 
    NEIMLNeisseria meningitidis (strain alpha14)19110.57
    95% 
    NEIMMNeisseria meningitidis serogroup B (strain M01-240149)19600.59
    98% 
    NEIMNNeisseria meningitidis serogroup B (strain NZ-05/33)19710.60
    97% 
    NEIMONeisseria meningitidis serogroup B (strain M04-240196)19820.60
    97% 
    NEIMPNeisseria meningitidis serogroup B (strain M01-240355)19970.61
    98% 
    NEIMWNeisseria meningitidis serogroup A (strain WUE 2594)20490.61
    96% 
    NEMVENematostella vectensis (Sea anemone)260368.87
    56% 
    NEOFINeosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)104025.07
    92% 
    NEORINeorickettsia risticii (strain Illinois)8980.25
    79% 
    NEOSMNeorickettsia sennetsu (strain Miyayama)9320.25
    77% 
    NEUCRNeurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)75693.68
    90% 
    NEUT9Neurospora tetrasperma (strain FGSC 2509 / P0656)103744.84
    81% 
    NIAKGNiastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10)71712.63
    76% 
    NITECNitrosomonas eutropha (strain C91)24700.77
    89% 
    NITEUNitrosomonas europaea (strain ATCC 19718 / NBRC 14298)24720.80
    91% 
    NITGGNitrososphaera gargensis (strain Ga9.2)35220.76
     41%
    NITHNNitrosococcus halophilus (strain Nc4)37691.17
    80% 
    NITHXNitrobacter hamburgensis (strain X14 / DSM 10229)42261.29
    85% 
    NITMSNitrosopumilus maritimus (strain SCM1)17950.49
    76% 
    NITMUNitrosospira multiformis (strain ATCC 25196 / NCIMB 11849)27290.90
    85% 
    NITOCNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)29920.99
    91% 
    NITSBNitratiruptor sp. (strain SB155-2)18570.59
    88% 
    NITSENitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1)20750.63
    83% 
    NITSINitrosomonas sp. (strain Is79A3)32731.02
    77% 
    NITWCNitrosococcus watsoni (strain C-113)28800.93
    91% 
    NITWNNitrobacter winogradskyi (strain Nb-255 / ATCC 25391)29760.92
    90% 
    NOCAANocardiopsis alba (strain ATCC BAA-2165 / BE74)55291.69
    80% 
    NOCCGNocardia cyriacigeorgica (strain GUH-2)54871.79
    88% 
    NOCDDNocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488)54971.83
    90% 
    NOCFANocardia farcinica (strain IFM 10152)59431.89
    85% 
    NOCSJNocardioides sp. (strain BAA-499 / JS614)48841.59
    80% 
    NOMLENomascus leucogenys (Northern white-cheeked gibbon)1871710.02
    96% 
    NONDDNonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6)36111.17
    75% 
    NOSA0Nostoc azollae (strain 0708)36460.94
    74% 
    NOSP7Nostoc punctiforme (strain ATCC 29133 / PCC 73102)65722.29
    80% 
    NOSS1Nostoc sp. (strain PCC 7120 / UTEX 2576)60691.96
    87% 
    NOSS7Nostoc sp. (strain ATCC 29411 / PCC 7524)53951.81
    88% 
    NOVADNovosphingobium aromaticivorans (strain DSM 12444)39171.29
    84% 
    OCEIHOceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)34891.02
    87% 
    OCEP5Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506)23720.75
    83% 
    OCESGOceanimonas sp. (strain GK1)31891.03
    92% 
    OCHA4Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)47571.50
    92% 
    OCHPROchotona princeps (Southern American pika)158687.78
    94% 
    ODOSDOdoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6)34761.26
    74% 
    OENOBOenococcus oeni (strain ATCC BAA-331 / PSU-1)16820.49
    80% 
    OLICMOligotropha carboxidovorans (strain OM4)35611.11
    97% 
    OLICOOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)38451.13
    90% 
    OLSUVOlsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / VPI D76D-27C)17390.59
    80% 
    ONCVOOnchocerca volvulus129485.04
    68% 
    ONYPEOnion yellows phytoplasma (strain OY-M)7260.20
    65% 
    OPITPOpitutus terrae (strain DSM 11246 / PB90-1)45881.75
    67% 
    ORENIOreochromis niloticus (Nile tilapia)2225712.66
    92% 
    ORITBOrientia tsutsugamushi (strain Boryong)18040.50
    55% 
    ORITIOrientia tsutsugamushi (strain Ikeda)16250.44
    65% 
    ORNANOrnithorhynchus anatinus (Platypus)197308.05
    73% 
    ORYBROryza brachyantha3130711.00
    69% 
    ORYGLOryza glaberrima (African rice)3160511.54
    87% 
    ORYLAOryzias latipes (Medaka fish)2049910.19
    85% 
    ORYNIOryza nivara (Indian wild rice)3774714.38
    83% 
    ORYPUOryza punctata (Red rice)3236113.07
    76% 
    ORYRUOryza rufipogon (Brownbeard rice)3839614.48
    82% 
    ORYSIOryza sativa subsp. indica (Rice)4036415.05
    81% 
    ORYSJOryza sativa subsp. japonica (Rice)3422511.49
    79% 
    OSTLUOstreococcus lucimarinus (strain CCE9901)74102.99
    80% 
    OSTTAOstreococcus tauri78603.38
    60% 
    OTOGAOtolemur garnettii (Small-eared galago)1951410.54
    95% 
    OWEHDOwenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963)34711.21
    77% 
    PAEMKPaenibacillus mucilaginosus (strain KNP414)77802.45
    70% 
    PAEP6Paenibacillus polymyxa (strain E681)47881.53
    90% 
    PAEPSPaenibacillus polymyxa (strain SC2)60241.74
    77% 
    PAESJPaenibacillus sp. (strain JDR-2)62092.10
    85% 
    PAETHPaenibacillus terrae (strain HPL-003)55161.70
    86% 
    PALPWPaludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4)30201.07
    82% 
    PANAAPantoea ananatis (strain AJ13355)37821.28
    96% 
    PANAMPantoea ananatis (strain LMG 20103)42371.37
    95% 
    PANSAPantoea sp. (strain At-9b)57601.83
    91% 
    PANTRPan troglodytes (Chimpanzee)1893610.11
    96% 
    PANVCPantoea vagans (strain C9-1)45911.40
    89% 
    PAPANPapio anubis (Olive baboon)1932910.45
    97% 
    PARAVParachlamydia acanthamoebae (strain UV7)27790.91
    60% 
    PARBHParvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087)26870.87
    77% 
    PARD8Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)38311.44
    84% 
    PARDPParacoccus denitrificans (strain Pd 1222)50151.56
    84% 
    PARL1Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)35791.15
    88% 
    PARUWProtochlamydia amoebophila (strain UWE25)20240.66
    62% 
    PASFUPassalora fulva (Tomato leaf mold)139576.07
    60% 
    PASMHPasteurella multocida (strain HN06)22380.69
    92% 
    PASMUPasteurella multocida (strain Pm70)20140.67
    97% 
    PECASPectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)44791.45
    94% 
    PECCPPectobacterium carotovorum subsp. carotovorum (strain PC1)42451.40
    96% 
    PECSSPectobacterium sp. (strain SCC3193)46891.46
    93% 
    PECWWPectobacterium wasabiae (strain WPP163)44311.42
    96% 
    PEDCPPediococcus claussenii (strain ATCC BAA-344 / DSM 14800 / JCM 18046 / KCTC 3811 / P06)18760.57
    89% 
    PEDHCPediculus humanus subsp. corporis (Body louse)107335.53
    72% 
    PEDHDPedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)42491.59
    85% 
    PEDPAPediococcus pentosaceus (strain ATCC 25745 / 183-1w)17550.54
    90% 
    PEDSDPedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643)37801.37
    87% 
    PELCDPelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)33401.06
    79% 
    PELHBPelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2)38741.17
    81% 
    PELLDPelodictyon luteolum (strain DSM 273)20770.70
    93% 
    PELPBPelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1)26850.85
    86% 
    PELPDPelobacter propionicus (strain DSM 2379)36911.20
    83% 
    PELSIPelodiscus sinensis (Chinese softshell turtle)183189.44
    88% 
    PELSMPelagibacter sp. (strain IMCC9063)14470.40
    75% 
    PELTSPelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI)28780.85
    80% 
    PELUBPelagibacter ubique (strain HTCC1062)13540.42
    86% 
    PENCHPenicillium chrysogenum113965.33
    93% 
    PENCWPenicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255)127705.70
    83% 
    PEPD6Peptoclostridium difficile (strain 630)38621.18
    92% 
    PEPDRPeptoclostridium difficile (strain R20291)35421.14
    98% 
    PERMHPersephonella marina (strain DSM 14350 / EX-H1)20470.62
    81% 
    PETMOPetrotoga mobilis (strain DSM 10674 / SJ95)18890.64
    84% 
    PHACHPhanerochaete chrysosporium (White-rot fungus)99344.55
    76% 
    PHANDPhaeosphaeria nodorum (Glume blotch fungus)159756.07
    90% 
    PHANOPhaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)164896.45
    91% 
    PHEZHPhenylobacterium zucineum (strain HLK1)38371.28
    91% 
    PHLGIPhlebiopsis gigantea (White-rot fungus)118804.88
    73% 
    PHOAAPhotorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)43431.39
    84% 
    PHOLLPhotorhabdus luminescens subsp. laumondii (strain TT01)47661.54
    84% 
    PHOPRPhotobacterium profundum53051.69
    82% 
    PHYASPhytoplasma australiense7800.21
    57% 
    PHYBLPhycomyces blakesleeanus160775.73
     49%
    PHYITPhytophthora infestans (strain T30-4) (Potato late blight fungus)177927.48
     31%
    PHYMFPhycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01)32681.14
    56% 
    PHYMTPhytoplasma mali (strain AT)4620.15
    73% 
    PHYPAPhyscomitrella patens subsp. patens (Moss)3277511.50
     41%
    PICSTScheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)57992.85
    92% 
    PICTOPicrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828)15350.47
    80% 
    PIGXXSus scrofa (Pig)214529.87
    88% 
    PIRIDPiriformospora indica (strain DSM 11827)117125.13
    51% 
    PIRSDPirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128)47111.77
    68% 
    PLAF7Plasmodium falciparum (isolate 3D7) (Malaria parasite)55034.10
     34%
    PLAL2Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)42581.53
    64% 
    POEFOPoecilia formosa (Amazon molly)2516314.01
    88% 
    POLGSPolymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1)43501.38
    89% 
    POLNAPolaromonas naphthalenivorans (strain CJ2)48731.56
    86% 
    POLNSPolynucleobacter necessarius subsp. necessarius (strain STIR1)15070.40
    77% 
    POLSJPolaromonas sp. (strain JS666 / ATCC BAA-500)54361.71
    87% 
    POLSQPolynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1)20740.67
    91% 
    PONABPongo abelii (Sumatran orangutan)184209.17
    94% 
    POPTRPopulus trichocarpa (Western balsam poplar)4129715.36
    74% 
    PORADPorphyromonas asaccharolytica (strain ATCC 25260 / DSM 20707 / VPI 4198)16720.63
    77% 
    PORG3Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257)20210.66
    85% 
    PORGIPorphyromonas gingivalis (strain ATCC BAA-308 / W83)18620.63
    91% 
    POSPMPostia placenta (strain ATCC 44394 / Madison 698-R) (Brown rot fungus)88053.85
     47%
    PREI7Prevotella intermedia (strain 17)22480.72
    77% 
    PREMBPrevotella melaninogenica (strain ATCC 25845 / DSM 7089 / JCM 6325 / VPI 2381 / B282)22880.84
    84% 
    PRER2Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23)27611.07
    79% 
    PRIPAPristionchus pacificus (Nematode)293638.48
     26%
    PROA2Prosthecochloris aestuarii (strain DSM 271 / SK 413)23190.75
    89% 
    PROA4Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070)33161.07
    81% 
    PROACPropionibacterium acnes (strain KPA171202 / DSM 16379)22940.76
    92% 
    PROASPropionibacterium acnes (strain SK137)23470.74
    88% 
    PROCAProcavia capensis (Cape hyrax)160027.87
    94% 
    PROFCPropionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1)23790.76
    79% 
    PROM0Prochlorococcus marinus (strain MIT 9301)19060.50
    91% 
    PROM1Prochlorococcus marinus (strain NATL1A)21730.54
    89% 
    PROM2Prochlorococcus marinus (strain MIT 9215)19830.52
    89% 
    PROM3Prochlorococcus marinus (strain MIT 9303)29830.76
    76% 
    PROM4Prochlorococcus marinus (strain MIT 9211)18540.50
    87% 
    PROM5Prochlorococcus marinus (strain MIT 9515)18990.50
    90% 
    PROM9Prochlorococcus marinus (strain MIT 9312)19590.51
    90% 
    PROMAProchlorococcus marinus (strain SARG / CCMP1375 / SS120)18810.52
    89% 
    PROMHProteus mirabilis (strain HI4320)37361.16
    87% 
    PROMMProchlorococcus marinus (strain MIT 9313)28940.69
    76% 
    PROMPProchlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4)19520.50
    90% 
    PROMSProchlorococcus marinus (strain AS9601)19200.50
    91% 
    PROMTProchlorococcus marinus (strain NATL2A)21410.53
    90% 
    PROPFPropionibacterium propionicum (strain F0230a)29310.94
    77% 
    PROSMProvidencia stuartii (strain MRSN 2154)42181.24
    82% 
    PROVIProsthecochloris vibrioformis (strain DSM 265)17500.59
    96% 
    PRUPEPrunus persica (Peach)2748111.16
    78% 
    PSE14Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6)50901.68
    92% 
    PSEA6Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)42711.49
    87% 
    PSEA7Pseudomonas aeruginosa (strain PA7)62461.95
    90% 
    PSEA8Pseudomonas aeruginosa (strain LESB58)59371.94
    97% 
    PSEABPseudomonas aeruginosa (strain UCBPP-PA14)58861.94
    98% 
    PSEAEPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)55571.86
    99% 
    PSEBNPseudomonas brassicacearum (strain NFM421)60812.00
    92% 
    PSEE4Pseudomonas entomophila (strain L48)51591.74
    93% 
    PSEF1Pseudomonas fulva (strain 12-X)44591.45
    94% 
    PSEF5Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)61072.06
    93% 
    PSEFSPseudomonas fluorescens (strain SBW25)64752.11
    86% 
    PSEHTPseudoalteromonas haloplanktis (strain TAC 125)34831.12
    91% 
    PSEMNPseudomonas mendocina (strain NK-01)49541.60
    94% 
    PSEMYPseudomonas mendocina (strain ymp)45631.50
    96% 
    PSEP1Pseudomonas putida (strain F1 / ATCC 700007)52441.76
    96% 
    PSEPBPseudomonas putida (strain BIRD-1)49581.66
    96% 
    PSEPFPseudomonas fluorescens (strain Pf0-1)57141.92
    93% 
    PSEPGPseudomonas putida (strain GB-1)53961.80
    95% 
    PSEPKPseudomonas putida (strain KT2440)53111.77
    94% 
    PSEPWPseudomonas putida (strain W619)51791.71
    95% 
    PSESMPseudomonas syringae pv. tomato (strain DC3000)54231.79
    90% 
    PSEU2Pseudomonas syringae pv. syringae (strain B728a)51171.78
    95% 
    PSEU5Pseudomonas stutzeri (strain A1501)40931.35
    94% 
    PSEU9Pseudoalteromonas sp. (strain SM9913)36951.17
    89% 
    PSEUPPseudoxanthomonas spadix (strain BD-a59)31471.00
    87% 
    PSEUTPseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221)41811.32
    93% 
    PSEUUPseudoxanthomonas suwonensis (strain 11-1)30681.01
    88% 
    PSEUVPseudovibrio sp. (strain FO-BEG1)54561.69
    76% 
    PSEUXPseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)66192.12
    81% 
    PSYA2Psychrobacter arcticus (strain DSM 17307 / 273-4)21250.71
    93% 
    PSYCKPsychrobacter cryohalolentis (strain K5)24950.85
    93% 
    PSYINPsychromonas ingrahamii (strain 37)35301.17
    85% 
    PSYTTPsychroflexus torquis (strain ATCC 700755 / ACAM 623)34551.14
    81% 
    PSYWFPsychrobacter sp. (strain PRwf-1)23380.82
    88% 
    PTEVAPteropus vampyrus (Large flying fox)169479.08
    98% 
    PUCGRPuccinia graminis (Black stem rust fungus)203647.51
    100% 
    PUCGTPuccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) (Black rust)203647.51
    100% 
    PUNMIPuniceispirillum marinum (strain IMCC1322)25450.83
    80% 
    PUNSTPunctularia strigosozonata (strain HHB-11173) (White-rot fungus)114955.06
    73% 
    PUSSTPusillimonas sp. (strain T7-7)37501.18
    85% 
    PYRABPyrococcus abyssi (strain GE5 / Orsay)17860.54
    97% 
    PYRAEPyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)26000.66
    82% 
    PYRARPyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)22950.61
    94% 
    PYRCJPyrobaculum calidifontis (strain JCM 11548 / VA1)21480.61
    92% 
    PYRF1Pyrolobus fumarii (strain DSM 11204 / 1A)19860.54
    68% 
    PYRFUPyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)20520.58
    88% 
    PYRHOPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)20770.57
    78% 
    PYRILPyrobaculum islandicum (strain DSM 4184 / JCM 9189)19760.53
    90% 
    PYRNVPyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta)19650.53
    95% 
    PYROTPyrobaculum oguniense (strain DSM 13380 / JCM 10595 / TE7)27970.71
    84% 
    PYRSNPyrococcus sp. (strain NA2)19800.57
    93% 
    PYRYCPyrococcus yayanosii (strain CH1 / JCM 16557)18650.51
    89% 
    RABITOryctolagus cuniculus (Rabbit)1973810.12
    91% 
    RAHACRahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65)48411.57
    95% 
    RAHSYRahnella sp. (strain Y9602)50971.62
    94% 
    RALMERalstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)61932.00
    90% 
    RALP1Ralstonia pickettii (strain 12D)53141.64
    90% 
    RALPJRalstonia pickettii (strain 12J)48861.54
    95% 
    RALS8Ralstonia solanacearum (strain Po82)49571.63
    85% 
    RALSLRalstonia solanacearum14160.52
    88% 
    RALSORalstonia solanacearum (strain GMI1000)50151.66
    91% 
    RAMTTRamlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310)38801.25
    88% 
    RATNORattus norvegicus (Rat)2269011.28
    90% 
    RENSMRenibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235)34200.93
    69% 
    RHIE6Rhizobium etli (strain CIAT 652)60981.86
    91% 
    RHIECRhizobium etli (strain CFN 42 / ATCC 51251)59711.87
    93% 
    RHIFHRhizobium fredii (strain HH103)66162.01
    88% 
    RHIL3Rhizobium leguminosarum bv. viciae (strain 3841)72432.25
    93% 
    RHILORhizobium loti (strain MAFF303099)72582.17
    85% 
    RHILSRhizobium leguminosarum bv. trifolii (strain WSM1325)69882.11
    93% 
    RHILWRhizobium leguminosarum bv. trifolii (strain WSM2304)64031.98
    95% 
    RHIMERhizobium meliloti (strain 1021) (Ensifer meliloti)61631.91
    95% 
    RHIORRhizopus oryzae (Mucormycosis agent)168315.81
     49%
    RHISNRhizobium sp. (strain NGR234)62541.94
    90% 
    RHOBARhodopirellula baltica (strain SH1)72692.29
     46%
    RHOCBRhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)36311.16
    86% 
    RHOCSRhodospirillum centenum (strain ATCC 51521 / SW)40191.27
    81% 
    RHOE1Rhodococcus equi (strain 103S)45981.54
    93% 
    RHOE4Rhodococcus erythropolis (strain PR4 / NBRC 100887)64242.09
    88% 
    RHOM4Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10)28611.02
    82% 
    RHOOBRhodococcus opacus (strain B4)81692.65
    88% 
    RHOP2Rhodopseudomonas palustris (strain HaA2)46801.55
    96% 
    RHOP5Rhodopseudomonas palustris (strain BisA53)48511.56
    92% 
    RHOPARhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)48291.59
    97% 
    RHOPBRhodopseudomonas palustris (strain BisB18)48641.56
    91% 
    RHOPRRhodnius prolixus (Triatomid bug)150455.40
    55% 
    RHOPSRhodopseudomonas palustris (strain BisB5)43881.41
    95% 
    RHOPTRhodopseudomonas palustris (strain TIE-1)52421.65
    95% 
    RHOPXRhodopseudomonas palustris (strain DX-1)49081.55
    95% 
    RHORTRhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)38391.29
    86% 
    RHOS1Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)41111.31
    96% 
    RHOS4Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)42841.33
    95% 
    RHOS5Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)41981.30
    90% 
    RHOSKRhodobacter sphaeroides (strain KD131 / KCTC 12085)45401.38
    91% 
    RHOSRRhodococcus sp. (strain RHA1)90652.87
    81% 
    RHOVTRhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299)35091.12
    81% 
    RICACRickettsia australis (strain Cutlack)12400.32
    79% 
    RICAERickettsia africae (strain ESF-5)10410.31
    97% 
    RICAGRickettsia amblyommii (strain GAT-30V)13770.36
    81% 
    RICAHRickettsia akari (strain Hartford)12550.31
    75% 
    RICB8Rickettsia bellii (strain OSU 85-389)14410.40
    88% 
    RICBRRickettsia bellii (strain RML369-C)13990.43
    93% 
    RICCKRickettsia canadensis (strain McKiel)10910.29
    75% 
    RICCNRickettsia conorii (strain ATCC VR-613 / Malish 7)13740.34
    89% 
    RICFERickettsia felis (strain ATCC VR-1525 / URRWXCal2)14280.42
    83% 
    RICJYRickettsia japonica (strain ATCC VR-1363 / YH)9700.30
    96% 
    RICM5Rickettsia massiliae (strain Mtu5)9690.32
    97% 
    RICMSRickettsia montanensis (strain OSU 85-930)12150.33
    88% 
    RICP3Rickettsia philipii (strain 364D)13430.33
    88% 
    RICPPRickettsia prowazekii (strain Rp22)9520.28
    87% 
    RICPRRickettsia prowazekii (strain Madrid E)8320.28
    97% 
    RICPTRickettsia parkeri (strain Portsmouth)13180.33
    89% 
    RICPURickettsia peacockii (strain Rustic)9270.29
    98% 
    RICR3Rickettsia rhipicephali (strain 3-7-female6-CWPP)12600.32
    85% 
    RICRORickettsia rickettsii (strain Iowa)13840.32
    86% 
    RICRSRickettsia rickettsii (strain Sheila Smith)13450.32
    88% 
    RICS1Rickettsia slovaca (strain 13-B)11140.30
    89% 
    RICTYRickettsia typhi (strain ATCC VR-144 / Wilmington)8370.28
    96% 
    RIEARRiemerella anatipestifer (strain RA-GD)19770.62
    84% 
    RIEPURiesia pediculicola (strain USDA)5380.15
    78% 
    ROBBHRobiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146)32111.08
    86% 
    ROSCSRoseiflexus castenholzii (strain DSM 13941 / HLO8)43241.56
    92% 
    ROSDORoseobacter denitrificans (strain ATCC 33942 / OCh 114)39391.24
    92% 
    ROSLORoseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149)44971.39
    89% 
    ROSS1Roseiflexus sp. (strain RS-1)44941.63
    90% 
    ROTDCRothia dentocariosa (strain ATCC 17931 / CDC X599 / XDIA)22080.71
    76% 
    ROTMDRothia mucilaginosa (strain DY-18)19910.76
    72% 
    RUBGIRubrivivax gelatinosus (strain NBRC 100245 / IL144)46971.56
    87% 
    RUBXDRubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)31210.98
    69% 
    RUEPORuegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)42691.38
    91% 
    RUESTRuegeria sp. (strain TM1040)38471.22
    89% 
    RUMA7Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7)37701.22
    57% 
    RUNSLRunella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4)59292.04
    80% 
    RUTMCRuthia magnifica subsp. Calyptogena magnifica9760.31
    95% 
    SACD2Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)39981.46
    82% 
    SACENSaccharopolyspora erythraea (strain NRRL 23338)71462.31
    82% 
    SACESSaccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764)84222.79
    81% 
    SACVDSaccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101)38281.24
    90% 
    SALA4Salmonella agona (strain SL483)45931.37
    92% 
    SALAISalinispora arenicola (strain CNS-205)48471.64
    91% 
    SALARSalmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)44991.33
    87% 
    SALBCSalmonella bongori (strain ATCC 43975 / DSM 13772 / NCTC 12419)39381.29
    96% 
    SALCHSalmonella choleraesuis (strain SC-B67)46051.37
    95% 
    SALDCSalmonella dublin (strain CT_02021853)46071.35
    93% 
    SALEPSalmonella enteritidis PT4 (strain P125109)43031.35
    98% 
    SALG2Salmonella gallinarum (strain 287/91 / NCTC 13346)42581.35
    98% 
    SALHSSalmonella heidelberg (strain SL476)47571.40
    93% 
    SALNSSalmonella newport (strain SL254)47871.42
    93% 
    SALPASalmonella paratyphi A (strain ATCC 9150 / SARB42)40821.25
    98% 
    SALPBSalmonella paratyphi B (strain ATCC BAA-1250 / SPB7)55591.44
    82% 
    SALPCSalmonella paratyphi C (strain RKS4594)46001.35
    95% 
    SALPKSalmonella paratyphi A (strain AKU_12601)44901.38
    97% 
    SALPSSalmonella pullorum (strain RKS5078 / SGSC2294)43171.24
    92% 
    SALRDSalinibacter ruber (strain DSM 13855 / M31)28121.01
    93% 
    SALRMSalinibacter ruber (strain M8)32461.10
    84% 
    SALSVSalmonella schwarzengrund (strain CVM19633)46031.36
    92% 
    SALT1Salmonella typhimurium (strain 14028s / SGSC 2262)54191.48
    88% 
    SALT4Salmonella typhimurium (strain 4/74)48241.46
    96% 
    SALTDSalmonella typhimurium (strain D23580)46301.45
    99% 
    SALTISalmonella typhi49111.48
    94% 
    SALTOSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)45221.52
    92% 
    SALTSSalmonella typhimurium (strain SL1344)44971.41
    99% 
    SALTYSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)45291.42
    98% 
    SANKSSanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74)37101.27
    88% 
    SAPGLSaprospira grandis (strain Lewin)42111.24
    51% 
    SARHASarcophilus harrisii (Tasmanian devil)193379.87
    89% 
    SCHCOSchizophyllum commune (Split gill fungus)131125.89
    63% 
    SCHMASchistosoma mansoni114045.25
     36%
    SCHPOSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)50872.37
    69% 
    SCLS1Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold)144465.24
    58% 
    SEBTESebaldella termitidis (strain ATCC 33386 / NCTC 11300)40561.26
    61% 
    SEGRDSegniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578)30000.95
    73% 
    SELMLSelaginella moellendorffii (Spikemoss)3272213.24
    56% 
    SELRLSelenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421)34801.07
    64% 
    SERP5Serratia proteamaculans (strain 568)49291.59
    95% 
    SERSASerratia plymuthica (strain AS9)49501.57
    94% 
    SETITSetaria italica (Foxtail millet)3562413.22
    73% 
    SHEAMShewanella amazonensis (strain ATCC BAA-1098 / SB2B)36381.26
    95% 
    SHEB2Shewanella baltica (strain OS223)43831.46
    96% 
    SHEB5Shewanella baltica (strain OS155 / ATCC BAA-1091)42181.39
    96% 
    SHEB6Shewanella baltica (strain OS678)45011.49
    97% 
    SHEB8Shewanella baltica (strain OS185)43651.47
    98% 
    SHEB9Shewanella baltica (strain OS195)46161.53
    98% 
    SHEDOShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)37261.27
    90% 
    SHEEPOvis aries (Sheep)2108410.95
    92% 
    SHEFNShewanella frigidimarina (strain NCIMB 400)39891.35
    95% 
    SHEHHShewanella halifaxensis (strain HAW-EB4)42751.45
    96% 
    SHELPShewanella loihica (strain ATCC BAA-1088 / PV-4)38541.31
    96% 
    SHEONShewanella oneidensis (strain MR-1)45841.37
    84% 
    SHEP2Shewanella putrefaciens (strain 200)40621.31
    95% 
    SHEPAShewanella pealeana (strain ATCC 700345 / ANG-SQ1)41791.42
    96% 
    SHEPCShewanella putrefaciens (strain CN-32 / ATCC BAA-453)39481.32
    98% 
    SHEPWShewanella piezotolerans (strain WP3 / JCM 13877)48951.51
    83% 
    SHESAShewanella sp. (strain ANA-3)43411.49
    96% 
    SHESHShewanella sediminis (strain HAW-EB3)44931.52
    93% 
    SHESMShewanella sp. (strain MR-4)39181.34
    99% 
    SHESRShewanella sp. (strain MR-7)40031.36
    98% 
    SHESWShewanella sp. (strain W3-18-1)40071.32
    97% 
    SHEVDShewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)43331.35
    83% 
    SHEWMShewanella woodyi (strain ATCC 51908 / MS32)48651.68
    91% 
    SHIB3Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)41211.15
    92% 
    SHIBCShimwellia blattae (strain ATCC 29907 / DSM 4481 / JCM 1650 / NBRC 105725 / CDC 9005-74)38671.21
    92% 
    SHIBSShigella boydii serotype 4 (strain Sb227)39051.17
    97% 
    SHIDSShigella dysenteriae serotype 1 (strain Sd197)38791.09
    90% 
    SHIF2Shigella flexneri serotype X (strain 2002017)44331.27
    95% 
    SHIF8Shigella flexneri serotype 5b (strain 8401)38491.18
    98% 
    SHIFLShigella flexneri49391.53
    92% 
    SHISSShigella sonnei (strain Ss046)40441.26
    97% 
    SIDLESideroxydans lithotrophicus (strain ES-1)29770.91
    86% 
    SIMASSimiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1)38111.29
    84% 
    SINADSingulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)71242.61
    63% 
    SINMBSinorhizobium meliloti (strain BL225C)63031.95
    96% 
    SINMKSinorhizobium meliloti (strain AK83)64121.94
    94% 
    SINMMSinorhizobium meliloti (strain SM11)73022.12
    89% 
    SINMWSinorhizobium medicae (strain WSM419)61451.92
    94% 
    SLAHDSlackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1)27500.90
    63% 
    SODGMSodalis glossinidius (strain morsitans)24870.72
    83% 
    SOLCMSolitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D)43041.51
    83% 
    SOLINSolenopsis invicta (Red imported fire ant)163785.69
    57% 
    SOLLCSolanum lycopersicum (Tomato)3370211.72
    73% 
    SOLSSSolibacillus silvestris (strain StLB046)38111.09
    84% 
    SOLTUSolanum tuberosum (Potato)4179612.48
    60% 
    SOLUESolibacter usitatus (strain Ellin6076)77582.98
    66% 
    SORARSorex araneus (Eurasian common shrew)130965.86
    90% 
    SORBISorghum bicolor (Sorghum)3544712.81
    72% 
    SORC5Sorangium cellulosum (strain So ce56)93363.75
    52% 
    SOYBNGlycine max (Soybean)5460621.49
    73% 
    SPAPNSpathaspora passalidarum (strain NRRL Y-27907 / 11-Y1)59732.69
    85% 
    SPETRSpermophilus tridecemlineatus (Squirrel)190399.66
    95% 
    SPHALSphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256)31811.01
    87% 
    SPHGBSphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy)30071.00
    86% 
    SPHJUSphingobium japonicum (strain NBRC 101211 / UT26S)43461.31
    79% 
    SPHPGSphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes)31501.07
    89% 
    SPHS2Sphingobacterium sp. (strain 21)51321.81
    85% 
    SPHTDSphaerobacter thermophilus (strain DSM 20745 / S 6022)34711.14
    78% 
    SPHWWSphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273)53111.78
    81% 
    SPIAZSpirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692)27661.01
    75% 
    SPICDSpirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1)18190.66
    83% 
    SPILDSpirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896)68662.43
    78% 
    SPIPNSpizellomyces punctatus91424.75
    61% 
    SPISSSpirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228)42101.43
    80% 
    SPITDSpirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1)21980.77
    95% 
    SPITZSpirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203)22490.79
    96% 
    STAA0Staphylococcus aureus (strain TW20 / 0582)28190.84
    97% 
    STAA1Staphylococcus aureus (strain Mu3 / ATCC 700698)26770.80
    98% 
    STAA2Staphylococcus aureus (strain JH1)27550.81
    97% 
    STAA3Staphylococcus aureus (strain USA300)26030.80
    98% 
    STAA4Staphylococcus aureus (strain 04-02981)26390.78
    98% 
    STAA5Staphylococcus aureus (strain MRSA ST398 / isolate S0385)26460.79
    95% 
    STAA8Staphylococcus aureus (strain NCTC 8325)28870.80
    91% 
    STAA9Staphylococcus aureus (strain JH9)27020.81
    98% 
    STAABStaphylococcus aureus (strain bovine RF122 / ET3-1)25810.76
    96% 
    STAACStaphylococcus aureus (strain COL)26750.77
    93% 
    STAADStaphylococcus aureus (strain ED98)26820.79
    94% 
    STAAEStaphylococcus aureus (strain Newman)25700.79
    98% 
    STAAFStaphylococcus aureus subsp. aureus (strain ED133)26200.76
    95% 
    STAAGStaphylococcus aureus (strain ECT-R 2)25140.76
    97% 
    STAAHStaphylococcus aureus (strain TCH60)26900.79
    95% 
    STAAJStaphylococcus aureus (strain JKD6159)25770.78
    98% 
    STAAKStaphylococcus aureus (strain JKD6008)26520.78
    96% 
    STAAMStaphylococcus aureus (strain Mu50 / ATCC 700699)27150.80
    98% 
    STAANStaphylococcus aureus (strain N315)25930.78
    98% 
    STAARStaphylococcus aureus (strain MRSA252)27230.81
    97% 
    STAASStaphylococcus aureus (strain MSSA476)26420.79
    97% 
    STAATStaphylococcus aureus (strain USA300 / TCH1516)26820.77
    93% 
    STAAWStaphylococcus aureus (strain MW2)26580.79
    97% 
    STAC7Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437)47501.50
    83% 
    STACTStaphylococcus carnosus (strain TM300)24600.73
    90% 
    STAEQStaphylococcus epidermidis (strain ATCC 35984 / RP62A)24990.72
    91% 
    STAESStaphylococcus epidermidis (strain ATCC 12228)24660.71
    88% 
    STAHDStaphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8)15990.46
    91% 
    STAHJStaphylococcus haemolyticus (strain JCSC1435)26360.76
    88% 
    STALHStaphylococcus lugdunensis (strain HKU09-01)24560.74
    92% 
    STAMFStaphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1)15700.45
    94% 
    STANDStarkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113)44231.40
    90% 
    STANLStackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21)63792.07
    78% 
    STAPHStaphylococcus pseudintermedius (strain HKU10-03)24490.72
    88% 
    STAS1Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229)25100.71
    89% 
    STEHRStereum hirsutum (strain FP-91666) (White-rot fungus)140246.41
    69% 
    STIADStigmatella aurantiaca (strain DW4/3-1)83073.10
    77% 
    STRA1Streptococcus agalactiae serotype Ia (strain ATCC 27591 / A909 / CDC SS700)19830.61
    97% 
    STRA2Streptococcus agalactiae serotype Ia (strain GD201008-001)19500.59
    96% 
    STRA3Streptococcus agalactiae serotype III (strain NEM316)20300.62
    96% 
    STRA5Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R)21050.62
    94% 
    STRAWStreptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680)76652.61
    89% 
    STRBBStreptomyces bingchenggensis (strain BCW-1)100173.43
    82% 
    STRCOStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)80922.64
    88% 
    STRDGStreptococcus dysgalactiae subsp. equisimilis (strain GGS_124)20860.61
    94% 
    STRE4Streptococcus equi subsp. equi (strain 4047)20430.62
    94% 
    STRE5Streptococcus salivarius (strain 57.I)19310.61
    94% 
    STRE8Streptococcus salivarius (strain JIM8777)19770.64
    94% 
    STRECStreptococcus equi subsp. zooepidemicus (strain ATCC 35246 / C74-63)20610.59
    87% 
    STREDStreptococcus dysgalactiae subsp. equisimilis (strain ATCC 12394 / D166B)20460.59
    91% 
    STREHStreptococcus salivarius (strain CCHSS3)20010.64
    95% 
    STREJStreptococcus suis (strain JS14)20530.61
    95% 
    STREMStreptococcus equi subsp. zooepidemicus (strain MGCS10565)18610.55
    92% 
    STRENStreptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)89842.79
    72% 
    STRESStreptococcus pseudopneumoniae (strain IS7493)22350.62
    87% 
    STRETStreptococcus pneumoniae (strain ST556)21350.60
    95% 
    STRFAStreptomyces pratensis (strain ATCC 33331 / IAF-45CD)65582.20
    93% 
    STRG1Streptococcus gallolyticus (strain ATCC 43143 / F-1867)22830.69
    95% 
    STRG2Streptococcus gallolyticus (strain ATCC BAA-2069)22920.68
    93% 
    STRG3Streptococcus gallolyticus (strain UCN34)22490.68
    97% 
    STRGCStreptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288)20500.64
    91% 
    STRGGStreptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)70102.47
    92% 
    STRGZStreptococcus suis (strain GZ1)19670.60
    95% 
    STRHJStreptomyces hygroscopicus subsp. jinggangensis (strain 5008)90452.85
    83% 
    STRICStreptococcus infantarius (strain CJ18)18720.53
    88% 
    STRIJStreptococcus intermedius (strain JTH08)17050.55
    94% 
    STRM5Stenotrophomonas maltophilia (strain R551-3)40261.36
    95% 
    STRM6Streptococcus mitis (strain B6)19800.61
    92% 
    STRM9Streptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC 10651 / 9901)14230.48
    69% 
    STRMDStreptococcus macedonicus (strain ACA-DC 198)21830.61
    85% 
    STRMKStenotrophomonas maltophilia (strain K279a)44001.44
    90% 
    STRMMStrigamia maritima (European centipede)148887.18
    54% 
    STRMNStreptococcus mutans serotype c (strain NN2025)18930.57
    95% 
    STRMUStreptococcus mutans serotype c (strain ATCC 700610 / UA159)19520.58
    92% 
    STROUStreptococcus oralis (strain Uo5)19080.58
    90% 
    STRP0Streptococcus pneumoniae serotype A19 (strain TCH8431)22570.60
    92% 
    STRP1Streptococcus pyogenes serotype M116920.51
    98% 
    STRP2Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)19150.57
    97% 
    STRP3Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)18580.54
    98% 
    STRP4Streptococcus pneumoniae serotype 19F (strain G54)20990.59
    93% 
    STRP6Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)18790.55
    95% 
    STRP7Streptococcus pneumoniae (strain 70585)21740.61
    94% 
    STRP8Streptococcus pyogenes serotype M18 (strain MGAS8232)18370.54
    96% 
    STRPBStreptococcus pyogenes serotype M12 (strain MGAS2096)18840.54
    91% 
    STRPCStreptococcus pyogenes serotype M12 (strain MGAS9429)18660.53
    94% 
    STRPDStreptococcus pyogenes serotype M2 (strain MGAS10270)19620.56
    94% 
    STRPFStreptococcus pyogenes serotype M4 (strain MGAS10750)19630.56
    94% 
    STRPGStreptococcus pyogenes serotype M5 (strain Manfredo)18090.53
    97% 
    STRPIStreptococcus pneumoniae (strain Hungary19A-6)21510.62
    94% 
    STRPJStreptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1)21250.64
    97% 
    STRPMStreptococcus pyogenes serotype M28 (strain MGAS6180)18880.55
    96% 
    STRPNStreptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)21070.60
    91% 
    STRPQStreptococcus pyogenes serotype M3 (strain SSI-1)18500.53
    96% 
    STRPSStreptococcus pneumoniae (strain CGSP14)21890.63
    94% 
    STRPUStrongylocentrotus purpuratus (Purple sea urchin)2688213.31
     50%
    STRPWStreptococcus parauberis (strain KCTC 11537)18640.56
    90% 
    STRPXStreptococcus pasteurianus (strain ATCC 43144 / JCM 5346 / CDC 1723-81)20190.59
    91% 
    STRPZStreptococcus pyogenes serotype M49 (strain NZ131)17020.51
    97% 
    STRR6Streptococcus pneumoniae (strain ATCC BAA-255 / R6)20380.59
    97% 
    STRRDStreptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100)89262.94
    84% 
    STRS2Streptococcus suis (strain 98HAH33)21780.61
    87% 
    STRS4Streptococcus suis (strain BM407)20260.63
    97% 
    STRS7Streptococcus equi subsp. zooepidemicus (strain H70)19400.60
    95% 
    STRSEStreptococcus suis (strain P1/7)18950.59
    98% 
    STRSVStreptococcus sanguinis (strain SK36)22670.70
    90% 
    STRSWStreptomyces scabies (strain 87.22)87582.92
    86% 
    STRSXStreptococcus suis (strain SC84)19700.61
    98% 
    STRSYStreptococcus suis (strain 05ZYH33)21780.61
    87% 
    STRT1Streptococcus thermophilus (strain CNRZ 1066)19000.50
    94% 
    STRT2Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)18700.50
    95% 
    STRTDStreptococcus thermophilus (strain ATCC BAA-491 / LMD-9)17040.47
    90% 
    STRTNStreptococcus thermophilus (strain ND03)19040.49
    89% 
    STRU0Streptococcus uberis (strain ATCC BAA-854 / 0140J)18220.55
    93% 
    STRVPStreptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)74422.47
    88% 
    STRZ6Streptococcus pneumoniae (strain 670-6B)23450.64
    93% 
    STRZIStreptococcus pneumoniae serotype 1 (strain INV104)19200.59
    97% 
    STRZJStreptococcus pneumoniae (strain JJA)21160.59
    94% 
    STRZNStreptococcus pneumoniae serotype 14 (strain INV200)20320.60
    95% 
    STRZOStreptococcus pneumoniae serotype 3 (strain OXC141)19700.58
    97% 
    STRZPStreptococcus pneumoniae (strain P1031)20660.58
    94% 
    STRZTStreptococcus pneumoniae (strain Taiwan19F-14)20340.58
    95% 
    SULAASulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825)17070.51
    92% 
    SULACSulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)22230.63
    90% 
    SULADSulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL)33631.00
    96% 
    SULAOSulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10)21550.67
    90% 
    SULATSulfobacillus acidophilus (strain TPY)37221.03
    88% 
    SULBSSulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3)24850.78
    92% 
    SULD5Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175)22430.70
    93% 
    SULDNSulfurimonas denitrificans (strain ATCC 33889 / DSM 1251)20820.67
    91% 
    SULIASulfolobus islandicus (strain M.16.27)26500.76
    98% 
    SULIDSulfolobus islandicus (strain L.D.8.5 / Lassen #2)29080.77
    91% 
    SULIHSulfolobus islandicus (strain HVE10/4)27160.76
    97% 
    SULIKSulfolobus islandicus (strain M.16.4 / Kamchatka #3)27290.75
    95% 
    SULILSulfolobus islandicus (strain L.S.2.15 / Lassen #1)27240.76
    97% 
    SULIMSulfolobus islandicus (strain M.14.25 / Kamchatka #1)25960.74
    98% 
    SULINSulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2)28500.77
    93% 
    SULIRSulfolobus islandicus (strain REY15A)26300.72
    94% 
    SULIYSulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1)28770.77
    94% 
    SULKYSulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1)27940.87
    81% 
    SULMCSulcia muelleri (strain CARI)2460.08
    95% 
    SULMDSulcia muelleri (strain DMIN)2260.08
    96% 
    SULMSSulcia muelleri (strain SMDSEM)2420.08
    93% 
    SULMWSulcia muelleri (strain GWSS)2270.08
    97% 
    SULNBSulfurovum sp. (strain NBC37-1)24600.77
    83% 
    SULS9Sulfolobus solfataricus (strain 98/2)26170.71
    95% 
    SULSOSulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)29280.83
    90% 
    SULSYSulfurihydrogenibium sp. (strain YO3AOP1)17120.52
    94% 
    SULTOSulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)28050.76
    89% 
    SYMTHSymbiobacterium thermophilum (strain T / IAM 14863)33121.02
    69% 
    SYNASSyntrophus aciditrophicus (strain SB)31380.93
    68% 
    SYNFMSyntrophobacter fumaroxidans (strain DSM 10017 / MPOB)40101.35
    75% 
    SYNGFSyntrophobotulus glycolicus (strain DSM 8271 / FlGlyR)31040.95
    84% 
    SYNJASynechococcus sp. (strain JA-3-3Ab)27470.82
    86% 
    SYNJBSynechococcus sp. (strain JA-2-3B'a(2-13))28340.86
    86% 
    SYNLTSyntrophothermus lipocalidus (strain DSM 12680 / TGB-C1)23110.69
    83% 
    SYNP2Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)31790.99
    84% 
    SYNP6Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)25250.79
    85% 
    SYNPWSynechococcus sp. (strain WH7803)25300.73
    89% 
    SYNPXSynechococcus sp. (strain WH8102)25230.73
    86% 
    SYNR3Synechococcus sp. (strain RCC307)25320.70
    81% 
    SYNS3Synechococcus sp. (strain CC9311)28810.75
    77% 
    SYNS9Synechococcus sp. (strain CC9902)23010.66
    93% 
    SYNSCSynechococcus sp. (strain CC9605)26320.72
    84% 
    SYNWWSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)24710.79
    83% 
    SYNY3Synechocystis sp. (strain PCC 6803 / Kazusa)34991.12
    83% 
    TAEGUTaeniopygia guttata (Zebra finch)171047.84
    88% 
    TAKRUTakifugu rubripes (Japanese pufferfish)2294212.89
    77% 
    TANFATannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338)29750.98
    71% 
    TARSYTarsius syrichta (Philippine tarsier)135556.43
    92% 
    TAYEMTaylorella equigenitalis (strain MCE9)15560.52
    79% 
    TEPAETepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1)27610.84
    85% 
    TERRKTerriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63)39311.41
    84% 
    TERSSTerriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4)41771.52
    84% 
    TERTTTeredinibacter turnerae (strain ATCC 39867 / T7901)42491.49
    77% 
    TETHNTetragenococcus halophilus (strain DSM 20338 / JCM 20259 / NCIMB 9735 / NBRC 12172)25050.72
    83% 
    TETNGTetraodon nigroviridis (Spotted green pufferfish)2002010.12
    89% 
    TETURTetranychus urticae (Two-spotted spider mite)180196.50
     39%
    THASPThauera sp. (strain MZ1T)39271.34
    90% 
    THEA1Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1)18120.55
    81% 
    THEABThermosipho africanus (strain TCF52B)19180.60
    91% 
    THEACThermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)14810.45
    88% 
    THEAHThermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12)15920.48
    94% 
    THEAMThermosphaera aggregans (strain DSM 11486 / M11TL)13870.40
    88% 
    THEASThermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883)17370.57
    85% 
    THEBDThermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51)35451.16
    91% 
    THEBMThermococcus barophilus (strain DSM 11836 / MP)22650.63
    87% 
    THEC1Thermogladius cellulolyticus (strain 1633)14140.41
    88% 
    THECCTheobroma cacao (Cacao)2964611.63
    69% 
    THECDThermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081)48881.57
    84% 
    THECKThermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4)38021.22
    86% 
    THEEBThermosynechococcus elongatus (strain BP-1)24470.77
    86% 
    THEFYThermobifida fusca (strain YX)31081.03
    89% 
    THEGJThermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)21570.64
    88% 
    THEGPThermodesulfobacterium geofontis (strain OPB45)15930.51
    87% 
    THEIAThermoanaerobacter italicus (strain DSM 9252 / Ab9)22390.69
    96% 
    THEIDThermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812)21840.69
    81% 
    THEKOThermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)23020.64
    88% 
    THELTThermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO)20400.67
    90% 
    THEM3Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3)21580.66
    96% 
    THEM4Thermosipho melanesiensis (strain BI429 / DSM 12029)18770.58
    90% 
    THEM7Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a)23240.80
    71% 
    THEMAThermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)18520.58
    96% 
    THENNThermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E)19360.61
    92% 
    THENRThermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10)17650.56
    99% 
    THEOJThermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P)21510.64
    90% 
    THEONThermococcus onnurineus (strain NA1)19760.56
    93% 
    THEP1Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)17830.57
    98% 
    THEP3Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E)21920.66
    96% 
    THEPDThermofilum pendens (strain Hrk 5)18760.54
    68% 
    THEPJThermincola potens (strain JR)29050.88
    81% 
    THEPXThermoanaerobacter sp. (strain X514)23220.70
    98% 
    THERPThermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)28580.87
    74% 
    THES4Thermococcus sp. (strain CGMCC 1.5172 / 4557)21330.61
    91% 
    THESMThermococcus sibiricus (strain MM 739 / DSM 12597)20360.55
    87% 
    THESQThermotoga sp. (strain RQ2)18180.59
    99% 
    THESWThermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485)27770.83
    91% 
    THESXThermoanaerobacter sp. (strain X513)23070.70
    98% 
    THET1Thermobaculum terrenum (strain ATCC BAA-798 / YNP1)28270.94
    75% 
    THET2Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)22010.67
    95% 
    THET8Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)22270.66
    93% 
    THETCThermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814)25830.78
    94% 
    THETGThermus thermophilus (strain SG0.5JP17-16)23250.70
    93% 
    THETKThermoproteus tenax (strain ATCC 35583 / NBRC 100435 / JCM 9277 / Kra 1)20480.55
    91% 
    THETNThermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)25470.76
    88% 
    THEU7Thermoproteus uzoniensis (strain 768-20)21840.59
    90% 
    THEVOThermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)15220.45
    87% 
    THEXLThermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11)23180.73
    96% 
    THEYDThermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)19820.61
    81% 
    THICAThioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1)16640.60
    88% 
    THICRThiomicrospira crunogena (strain XCL-2)21870.72
    86% 
    THIDAThiobacillus denitrificans (strain ATCC 25259)28260.89
    86% 
    THIHEThielavia heterothallica90874.31
    78% 
    THIK1Thiomonas intermedia (strain K12)31341.02
    86% 
    THISHThioalkalivibrio sp. (strain HL-EbGR7)32721.00
    84% 
    THIV6Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111)41881.37
    70% 
    TISMKTistrella mobilis (strain KA081020-065)57801.93
    83% 
    TOLATTolumonas auensis (strain DSM 9187 / TA4)31261.02
    90% 
    TOXGOToxoplasma gondii79805.94
     29%
    TRAVSTrametes versicolor (strain FP-101664) (White-rot fungus)142106.00
    72% 
    TREAZTreponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9)34531.16
    75% 
    TREBDTreponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3)25220.91
    84% 
    TRECHTreponema caldaria (strain ATCC 51460 / DSM 7334 / H1)27530.97
    86% 
    TREDETreponema denticola (strain ATCC 35405 / CIP 103919 / DSM 14222)27530.86
    68% 
    TREMETremella mesenterica (Jelly fungus)82483.85
    60% 
    TREPATreponema pallidum (strain Nichols)10270.35
    96% 
    TREPCTreponema pallidum subsp. pallidum (strain Chicago)9810.33
    90% 
    TREPDTreponema pallidum subsp. pertenue (strain CDC2)10650.36
    100% 
    TREPMTreponema pallidum subsp. pertenue (strain Samoa D)10650.36
    100% 
    TREPPTremblaya princeps (strain PCIT)1200.03
    55% 
    TREPSTreponema pallidum subsp. pallidum (strain SS14)10280.35
    96% 
    TREPUTreponema paraluiscuniculi (strain Cuniculi A)10090.35
    95% 
    TREPZTreponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2)35121.21
    76% 
    TRES6Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091)25590.83
    71% 
    TRIADTrichoplax adhaerens114665.21
    67% 
    TRICATribolium castaneum (Red flour beetle)147986.70
    62% 
    TRIEITrichodesmium erythraeum (strain IMS101)43271.52
    72% 
    TRISPTrichinella spiralis (Trichina worm)156615.11
     27%
    TRIUATriticum urartu (Red wild einkorn)3263512.01
    73% 
    TROW8Tropheryma whipplei (strain TW08/27) (Whipple's bacillus)7820.26
    95% 
    TROWTTropheryma whipplei (strain Twist)8050.26
    92% 
    TRURRTruepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24)29240.94
    79% 
    TRYB2Trypanosoma brucei brucei (strain 927/4 GUTat10.1)67853.38
    53% 
    TSUPDTsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040)41691.34
    86% 
    TUBMMTuber melanosporum (strain Mel28) (Perigord black truffle)74933.28
    65% 
    TUPBETupaia belangeri (Common tree shrew)153736.81
    91% 
    TURPDTurneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H)40911.33
    55% 
    TURTRTursiops truncatus (Atlantic bottle-nosed dolphin)164968.99
    98% 
    UNCMAUncultured methanogenic archaeon RC-I30690.89
    79% 
    UNCTGUncultured termite group 1 bacterium phylotype Rs-D177670.25
    85% 
    UREP2Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736)6090.23
    99% 
    UREPAUreaplasma parvum serovar 3 (strain ATCC 700970)6110.23
    97% 
    UREU1Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western)6460.26
    88% 
    USTMAUstilago maydis (strain 521 / FGSC 9021)65103.99
    53% 
    VARPEVariovorax paradoxus (strain EPS)59361.99
    92% 
    VARPSVariovorax paradoxus (strain S110)62722.05
    92% 
    VEIPTVeillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3)18430.62
    81% 
    VERDAVerticillium dahliae (Verticillium wilt)105294.99
    77% 
    VEREIVerminephrobacter eiseniae (strain EF01-2)49091.65
    83% 
    VERMAVerrucosispora maris (strain AB-18-032)59961.97
    89% 
    VESOHVesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA)9380.29
    95% 
    VIBA7Vibrio anguillarum (strain ATCC 68554 / 775)37171.17
    88% 
    VIBC3Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)37721.19
    93% 
    VIBCBVibrio campbellii (strain ATCC BAA-1116 / BB120)58861.70
    78% 
    VIBCHVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)37821.15
    92% 
    VIBCJVibrio cholerae serotype O1 (strain MJ-1236)36931.19
    95% 
    VIBCMVibrio cholerae serotype O1 (strain M66-2)36521.15
    93% 
    VIBF1Vibrio fischeri (strain ATCC 700601 / ES114)38191.24
    95% 
    VIBFMVibrio fischeri (strain MJ11)40341.30
    91% 
    VIBFNVibrio furnissii (strain DSM 14383 / NCTC 11218)44401.40
    91% 
    VIBPAVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)48201.49
    89% 
    VIBSEVibrio sp. (strain Ex25)45141.44
    94% 
    VIBSLVibrio splendidus (strain LGP32)44201.42
    88% 
    VIBVMVibrio vulnificus (strain MO6-24/O)45471.44
    91% 
    VIBVUVibrio vulnificus (strain CMCP6)44701.44
    92% 
    VIBVYVibrio vulnificus (strain YJ016)49871.55
    87% 
    VICPAVicugna pacos (Alpaca)117335.49
    92% 
    VITVIVitis vinifera (Grape)262079.55
    69% 
    VULDIVulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017)24920.71
    89% 
    VULM7Vulcanisaeta moutnovskia (strain 768-28)23180.67
    91% 
    WADCWWaddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044)19180.66
    72% 
    WALSEWallemia sebi52672.23
    72% 
    WEEVCWeeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78)20440.67
    84% 
    WEIKKWeissella koreensis (strain KACC 15510)13460.40
    83% 
    WHEATTriticum aestivum (Wheat)8962427.57
    63% 
    WIGBRWigglesworthia glossinidia brevipalpis6120.20
    95% 
    WOLCOWolfiporia cocos (strain MD-104) (Brown rot fungus)127265.20
    69% 
    WOLPMWolbachia pipientis wMel11590.33
    81% 
    WOLPPWolbachia pipientis subsp. Culex pipiens (strain wPip)12380.40
    78% 
    WOLSUWolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W)20270.65
    88% 
    WOLTRWolbachia sp. subsp. Brugia malayi (strain TRS)8050.24
    81% 
    WOLWRWolbachia sp. subsp. Drosophila simulans (strain wRi)10330.33
    94% 
    XANACXanthomonas axonopodis pv. citri (strain 306)43521.50
    91% 
    XANAPXanthomonas albilineans (strain GPE PC73 / CFBP 7063)31891.12
    85% 
    XANC5Xanthomonas campestris pv. vesicatoria (strain 85-10)46251.55
    88% 
    XANC8Xanthomonas campestris pv. campestris (strain 8004)42351.44
    98% 
    XANCBXanthomonas campestris pv. campestris (strain B100)44521.47
    91% 
    XANCPXanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)41231.42
    98% 
    XANOMXanthomonas oryzae pv. oryzae (strain MAFF 311018)41841.34
    94% 
    XANOPXanthomonas oryzae pv. oryzae (strain PXO99A)45591.32
    84% 
    XANORXanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85)43521.41
    87% 
    XANP2Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)49691.62
    89% 
    XENBSXenorhabdus bovienii (strain SS-2004)41421.18
    76% 
    XENNAXenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)46211.30
    72% 
    XENTRXenopus tropicalis (Western clawed frog)1929110.39
    83% 
    XIPMAXiphophorus maculatus (Southern platyfish)2037011.15
    97% 
    XYLCXXylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)33351.13
    85% 
    XYLF2Xylella fastidiosa (strain M23)21570.67
    96% 
    XYLFAXylella fastidiosa (strain 9a5c)27750.74
    77% 
    XYLFGXylella fastidiosa (strain GB514)21810.62
    88% 
    XYLFMXylella fastidiosa (strain M12)20530.63
    92% 
    XYLFTXylella fastidiosa (strain Temecula1 / ATCC 700964)20030.65
    99% 
    YARLIYarrowia lipolytica (strain CLIB 122 / E 150) (Yeast)64243.11
    66% 
    YEASTSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)63522.95
    76% 
    YERE1Yersinia enterocolitica subsp. palearctica serotype O:3 (strain DSM 13030 / CIP 106945 / Y11)43861.28
    88% 
    YERE3Yersinia enterocolitica subsp. palearctica serotype O:9 / biotype 3 (strain 105.5R(r))39811.25
    96% 
    YERE8Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)41061.31
    96% 
    YERP1Yersinia pestis (strain D182038)34881.20
    97% 
    YERP3Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)43031.36
    91% 
    YERPAYersinia pestis bv. Antiqua (strain Antiqua)41291.30
    97% 
    YERPBYersinia pseudotuberculosis serotype IB (strain PB1/+)42131.32
    95% 
    YERPDYersinia pestis (strain D106004)34931.21
    98% 
    YERPEYersinia pestis40061.28
    97% 
    YERPGYersinia pestis bv. Antiqua (strain Angola)38171.14
    91% 
    YERPHYersinia pestis bv. Medievalis (strain Harbin 35)42891.22
    89% 
    YERPNYersinia pestis bv. Antiqua (strain Nepal516)39371.25
    98% 
    YERPPYersinia pestis (strain Pestoides F)39371.26
    98% 
    YERPSYersinia pseudotuberculosis serotype I (strain IP32953)40931.34
    98% 
    YERPYYersinia pseudotuberculosis serotype O:3 (strain YPIII)41691.30
    94% 
    YERPZYersinia pestis (strain Z176003)35441.23
    100% 
    ZINICZinderia insecticola (strain CARI)2060.06
    66% 
    ZOBGAZobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij)47281.66
    83% 
    ZOONEZootermopsis nevadensis (Dampwood termite)143366.03
    63% 
    ZUNPSZunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87)46311.48
    80% 
    ZYMMAZymomonas mobilis subsp. mobilis (strain ATCC 10988 / DSM 424 / LMG 404 / NCIMB 8938 / NRRL B-806 / ZM1)17770.59
    98% 
    ZYMMNZymomonas mobilis subsp. mobilis (strain NCIB 11163)18840.63
    97% 
    ZYMMOZymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)17800.60
    97% 
    ZYMMTZymomonas mobilis subsp. pomaceae (strain ATCC 29192 / JCM 10191 / NBRC 13757 / NCIMB 11200 / NRRL B-4491)17400.58
    94% 

    Last update: Fri Aug 28 06:44:14 2015
    Last change: Thu Aug 27 03:44:26 2015 (Actinobacteria Tree)
    Program to produce page by Adrian Altenhoff